Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 MIR196A2-201ENST00000385189 110 ntBASIC-0.52□□□□□ -2.49
VPS35Q96QK1 SNORD37.2-201ENST00000391075 66 ntBASIC-0.52□□□□□ -2.49
VPS35Q96QK1 AC062037.2-201ENST00000610137 73 ntBASIC-0.52□□□□□ -2.49
VPS35Q96QK1 AL162726.3-218ENST00000636401 95 ntBASIC-0.52□□□□□ -2.49
VPS35Q96QK1 SNORD114-11-201ENST00000363738 75 ntBASIC-0.53□□□□□ -2.49
VPS35Q96QK1 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.53□□□□□ -2.49
VPS35Q96QK1 SNORA20.1-201ENST00000364790 130 ntBASIC-0.53□□□□□ -2.49
VPS35Q96QK1 RNU6-239P-201ENST00000390990 99 ntBASIC-0.53□□□□□ -2.49
VPS35Q96QK1 AL603914.1-201ENST00000401964 204 ntBASIC-0.53□□□□□ -2.49
VPS35Q96QK1 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.53□□□□□ -2.49
VPS35Q96QK1 MIR4802-201ENST00000581881 80 ntBASIC-0.53□□□□□ -2.49
VPS35Q96QK1 AL137067.1-201ENST00000615933 120 ntBASIC-0.53□□□□□ -2.49
VPS35Q96QK1 MIR3658-201ENST00000636291 56 ntBASIC-0.53□□□□□ -2.49
VPS35Q96QK1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.53□□□□□ -2.49
VPS35Q96QK1 RNY1P11-201ENST00000363759 113 ntBASIC-0.54□□□□□ -2.5
VPS35Q96QK1 U8.6-201ENST00000364939 135 ntBASIC-0.54□□□□□ -2.5
VPS35Q96QK1 MIR568-201ENST00000385036 95 ntBASIC-0.54□□□□□ -2.5
VPS35Q96QK1 RNU7-106P-201ENST00000459514 67 ntBASIC-0.54□□□□□ -2.5
VPS35Q96QK1 RNU6-850P-201ENST00000516934 103 ntBASIC-0.54□□□□□ -2.5
VPS35Q96QK1 MIR4473-201ENST00000583731 91 ntBASIC-0.54□□□□□ -2.5
VPS35Q96QK1 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.55□□□□□ -2.5
VPS35Q96QK1 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.55□□□□□ -2.5
VPS35Q96QK1 MIR34C-201ENST00000384831 77 ntBASIC-0.55□□□□□ -2.5
VPS35Q96QK1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.55□□□□□ -2.5
VPS35Q96QK1 AC108081.1-201ENST00000604358 221 ntBASIC-0.55□□□□□ -2.5
VPS35Q96QK1 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.56□□□□□ -2.5
VPS35Q96QK1 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.56□□□□□ -2.5
VPS35Q96QK1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.56□□□□□ -2.5
VPS35Q96QK1 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.56□□□□□ -2.5
VPS35Q96QK1 MIR548AG2-201ENST00000581228 64 ntBASIC-0.56□□□□□ -2.5
VPS35Q96QK1 MIR4636-201ENST00000582271 80 ntBASIC-0.56□□□□□ -2.5
VPS35Q96QK1 AC087741.2-201ENST00000619415 172 ntBASIC-0.56□□□□□ -2.5
VPS35Q96QK1 RNU4-84P-201ENST00000364200 139 ntBASIC-0.57□□□□□ -2.5
VPS35Q96QK1 SNORD115-44-201ENST00000365391 82 ntBASIC-0.57□□□□□ -2.5
VPS35Q96QK1 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.57□□□□□ -2.5
VPS35Q96QK1 MIR617-201ENST00000385030 97 ntBASIC-0.57□□□□□ -2.5
VPS35Q96QK1 MIR519E-201ENST00000385075 84 ntBASIC-0.57□□□□□ -2.5
VPS35Q96QK1 RNU6-284P-201ENST00000411105 106 ntBASIC-0.57□□□□□ -2.5
VPS35Q96QK1 RNU7-121P-201ENST00000516604 62 ntBASIC-0.57□□□□□ -2.5
VPS35Q96QK1 RNU7-188P-201ENST00000517063 64 ntBASIC-0.57□□□□□ -2.5
VPS35Q96QK1 AC022559.1-201ENST00000520905 205 ntBASIC-0.57□□□□□ -2.5
VPS35Q96QK1 MIR4263-201ENST00000584745 83 ntBASIC-0.57□□□□□ -2.5
VPS35Q96QK1 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.57□□□□□ -2.5
VPS35Q96QK1 AC069503.3-201ENST00000618674 145 ntBASIC-0.57□□□□□ -2.5
VPS35Q96QK1 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.58□□□□□ -2.5
VPS35Q96QK1 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.58□□□□□ -2.5
VPS35Q96QK1 AC093423.1-201ENST00000440817 142 ntBASIC-0.58□□□□□ -2.5
VPS35Q96QK1 MIR4432-201ENST00000581823 84 ntBASIC-0.58□□□□□ -2.5
VPS35Q96QK1 FTX_2.1-201ENST00000618816 94 ntBASIC-0.58□□□□□ -2.5
VPS35Q96QK1 MIR101-1-201ENST00000362265 75 ntBASIC-0.59□□□□□ -2.5
VPS35Q96QK1 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.59□□□□□ -2.5
VPS35Q96QK1 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.59□□□□□ -2.5
VPS35Q96QK1 SNORD38.2-201ENST00000384470 69 ntBASIC-0.59□□□□□ -2.5
VPS35Q96QK1 RNU6-35P-201ENST00000384530 107 ntBASIC-0.59□□□□□ -2.5
VPS35Q96QK1 MIR516A2-201ENST00000384888 90 ntBASIC-0.59□□□□□ -2.5
VPS35Q96QK1 MIR516A1-201ENST00000385033 90 ntBASIC-0.59□□□□□ -2.5
VPS35Q96QK1 Z95118.1-201ENST00000421372 247 ntBASIC-0.59□□□□□ -2.5
VPS35Q96QK1 AL118496.2-201ENST00000448300 230 ntBASIC-0.59□□□□□ -2.5
VPS35Q96QK1 RNU7-6P-201ENST00000516845 62 ntBASIC-0.59□□□□□ -2.5
VPS35Q96QK1 MIR4493-201ENST00000584016 73 ntBASIC-0.59□□□□□ -2.5
VPS35Q96QK1 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.6□□□□□ -2.51
VPS35Q96QK1 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.6□□□□□ -2.51
VPS35Q96QK1 RNA5SP451-201ENST00000410588 110 ntBASIC-0.6□□□□□ -2.51
VPS35Q96QK1 RNU6-175P-201ENST00000516896 107 ntBASIC-0.6□□□□□ -2.51
VPS35Q96QK1 YWHAEP2-201ENST00000580066 112 ntBASIC-0.6□□□□□ -2.51
VPS35Q96QK1 uc_338.10-201ENST00000621872 182 ntBASIC-0.6□□□□□ -2.51
VPS35Q96QK1 MIR181B2-201ENST00000385004 89 ntBASIC-0.61□□□□□ -2.51
VPS35Q96QK1 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
VPS35Q96QK1 AC114755.3-201ENST00000481111 251 ntBASIC-0.61□□□□□ -2.51
VPS35Q96QK1 RNU6-521P-201ENST00000516663 105 ntBASIC-0.61□□□□□ -2.51
VPS35Q96QK1 MIR548AE1-201ENST00000583292 70 ntBASIC-0.61□□□□□ -2.51
VPS35Q96QK1 U4.1-201ENST00000620349 87 ntBASIC-0.61□□□□□ -2.51
VPS35Q96QK1 uc_338.36-201ENST00000622331 158 ntBASIC-0.61□□□□□ -2.51
VPS35Q96QK1 SNORD115-19-201ENST00000363098 82 ntBASIC-0.62□□□□□ -2.51
VPS35Q96QK1 SNORD115-18-201ENST00000363293 82 ntBASIC-0.62□□□□□ -2.51
VPS35Q96QK1 SNORD115-17-201ENST00000364612 82 ntBASIC-0.62□□□□□ -2.51
VPS35Q96QK1 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.62□□□□□ -2.51
VPS35Q96QK1 RNU6-480P-201ENST00000384332 107 ntBASIC-0.62□□□□□ -2.51
VPS35Q96QK1 MIR604-201ENST00000384880 94 ntBASIC-0.62□□□□□ -2.51
VPS35Q96QK1 MIR1265-201ENST00000408444 86 ntBASIC-0.62□□□□□ -2.51
VPS35Q96QK1 MIR2113-201ENST00000459007 91 ntBASIC-0.62□□□□□ -2.51
VPS35Q96QK1 RNU6-327P-201ENST00000516270 127 ntBASIC-0.62□□□□□ -2.51
VPS35Q96QK1 RNU6-758P-201ENST00000516292 89 ntBASIC-0.62□□□□□ -2.51
VPS35Q96QK1 RNA5SP395-201ENST00000516567 118 ntBASIC-0.62□□□□□ -2.51
VPS35Q96QK1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.62□□□□□ -2.51
VPS35Q96QK1 MIR4460-201ENST00000577862 86 ntBASIC-0.62□□□□□ -2.51
VPS35Q96QK1 MIR3163-201ENST00000581592 73 ntBASIC-0.62□□□□□ -2.51
VPS35Q96QK1 AC072026.1-201ENST00000605023 201 ntBASIC-0.62□□□□□ -2.51
VPS35Q96QK1 MIR539-201ENST00000365690 78 ntBASIC-0.63□□□□□ -2.51
VPS35Q96QK1 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.63□□□□□ -2.51
VPS35Q96QK1 AC130289.1-201ENST00000577321 73 ntBASIC-0.63□□□□□ -2.51
VPS35Q96QK1 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.63□□□□□ -2.51
VPS35Q96QK1 AL391099.1-201ENST00000624635 187 ntBASIC-0.63□□□□□ -2.51
VPS35Q96QK1 SNORA51.5-201ENST00000384126 131 ntBASIC-0.64□□□□□ -2.51
VPS35Q96QK1 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.64□□□□□ -2.51
VPS35Q96QK1 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.64□□□□□ -2.51
VPS35Q96QK1 MIR548AZ-201ENST00000616567 95 ntBASIC-0.64□□□□□ -2.51
VPS35Q96QK1 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.65□□□□□ -2.51
VPS35Q96QK1 SNORD114-29-201ENST00000364819 70 ntBASIC-0.65□□□□□ -2.51
VPS35Q96QK1 MT-TI-201ENST00000387365 69 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 347.7 ms