Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 MIR519C-201ENST00000385053 87 ntBASIC1.45□□□□□ -2.18
ZSWIM3Q96MP5 SNORD100-201ENST00000408573 76 ntBASIC1.45□□□□□ -2.18
ZSWIM3Q96MP5 RNU1-123P-201ENST00000458950 160 ntBASIC1.45□□□□□ -2.18
ZSWIM3Q96MP5 AC023790.1-201ENST00000482174 347 ntBASIC1.45□□□□□ -2.18
ZSWIM3Q96MP5 MIR6504-201ENST00000613520 61 ntBASIC1.45□□□□□ -2.18
ZSWIM3Q96MP5 RNU6-369P-201ENST00000362515 102 ntBASIC1.44□□□□□ -2.18
ZSWIM3Q96MP5 RNU6-934P-201ENST00000365154 107 ntBASIC1.44□□□□□ -2.18
ZSWIM3Q96MP5 MIR516A2-201ENST00000384888 90 ntBASIC1.44□□□□□ -2.18
ZSWIM3Q96MP5 MIR516A1-201ENST00000385033 90 ntBASIC1.44□□□□□ -2.18
ZSWIM3Q96MP5 MIR125B2-201ENST00000385128 89 ntBASIC1.44□□□□□ -2.18
ZSWIM3Q96MP5 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
ZSWIM3Q96MP5 RNU6-1254P-201ENST00000391266 104 ntBASIC1.44□□□□□ -2.18
ZSWIM3Q96MP5 RNU6-279P-201ENST00000391297 101 ntBASIC1.44□□□□□ -2.18
ZSWIM3Q96MP5 RNA5SP102-201ENST00000516865 106 ntBASIC1.44□□□□□ -2.18
ZSWIM3Q96MP5 AL161722.3-201ENST00000605789 2983 ntBASIC1.44□□□□□ -2.18
ZSWIM3Q96MP5 Y_RNA.13-201ENST00000362403 112 ntBASIC1.43□□□□□ -2.18
ZSWIM3Q96MP5 RNU6-403P-201ENST00000363163 104 ntBASIC1.43□□□□□ -2.18
ZSWIM3Q96MP5 Y_RNA.118-201ENST00000363300 101 ntBASIC1.43□□□□□ -2.18
ZSWIM3Q96MP5 SNORA72.6-201ENST00000384520 129 ntBASIC1.43□□□□□ -2.18
ZSWIM3Q96MP5 MIR320A-201ENST00000385302 82 ntBASIC1.43□□□□□ -2.18
ZSWIM3Q96MP5 SNORD63B-201ENST00000411005 70 ntBASIC1.43□□□□□ -2.18
ZSWIM3Q96MP5 RNU7-40P-201ENST00000516397 64 ntBASIC1.43□□□□□ -2.18
ZSWIM3Q96MP5 Y_RNA.224-201ENST00000364308 111 ntBASIC1.42□□□□□ -2.18
ZSWIM3Q96MP5 RNU6-910P-201ENST00000390844 107 ntBASIC1.42□□□□□ -2.18
ZSWIM3Q96MP5 SNORD12-201ENST00000391002 90 ntBASIC1.42□□□□□ -2.18
ZSWIM3Q96MP5 MIR1255A-201ENST00000408338 113 ntBASIC1.42□□□□□ -2.18
ZSWIM3Q96MP5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.42□□□□□ -2.18
ZSWIM3Q96MP5 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
ZSWIM3Q96MP5 RPS26P5-201ENST00000418544 335 ntBASIC1.42□□□□□ -2.18
ZSWIM3Q96MP5 RNU7-106P-201ENST00000459514 67 ntBASIC1.42□□□□□ -2.18
ZSWIM3Q96MP5 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.42□□□□□ -2.18
ZSWIM3Q96MP5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.42□□□□□ -2.18
ZSWIM3Q96MP5 MIR4771-2-201ENST00000577758 74 ntBASIC1.42□□□□□ -2.18
ZSWIM3Q96MP5 MIR4771-1-201ENST00000582617 74 ntBASIC1.42□□□□□ -2.18
ZSWIM3Q96MP5 SNORD92-201ENST00000585078 85 ntBASIC1.42□□□□□ -2.18
ZSWIM3Q96MP5 AC013244.2-201ENST00000603396 103 ntBASIC1.42□□□□□ -2.18
ZSWIM3Q96MP5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
ZSWIM3Q96MP5 RNU6-524P-201ENST00000384270 107 ntBASIC1.41□□□□□ -2.18
ZSWIM3Q96MP5 RNA5SP225-201ENST00000410874 135 ntBASIC1.41□□□□□ -2.18
ZSWIM3Q96MP5 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.41□□□□□ -2.18
ZSWIM3Q96MP5 RNU7-90P-201ENST00000459216 62 ntBASIC1.41□□□□□ -2.18
ZSWIM3Q96MP5 snoU13.11-201ENST00000459219 104 ntBASIC1.41□□□□□ -2.18
ZSWIM3Q96MP5 TRAJ51-201ENST00000504127 63 ntBASIC1.41□□□□□ -2.18
ZSWIM3Q96MP5 RNU6-75P-201ENST00000515944 104 ntBASIC1.41□□□□□ -2.18
ZSWIM3Q96MP5 AC023827.1-201ENST00000569247 97 ntBASIC1.41□□□□□ -2.18
ZSWIM3Q96MP5 RNU7-10P-201ENST00000607194 63 ntBASIC1.41□□□□□ -2.18
ZSWIM3Q96MP5 Y_RNA.56-201ENST00000362798 112 ntBASIC1.4□□□□□ -2.19
ZSWIM3Q96MP5 Y_RNA.283-201ENST00000364798 112 ntBASIC1.4□□□□□ -2.19
ZSWIM3Q96MP5 Y_RNA.536-201ENST00000384621 113 ntBASIC1.4□□□□□ -2.19
ZSWIM3Q96MP5 RNU6-243P-201ENST00000391140 107 ntBASIC1.4□□□□□ -2.19
ZSWIM3Q96MP5 AC015818.7-201ENST00000428754 109 ntBASIC1.4□□□□□ -2.19
ZSWIM3Q96MP5 RPS29P23-201ENST00000458635 123 ntBASIC1.4□□□□□ -2.19
ZSWIM3Q96MP5 AC004223.1-201ENST00000479840 271 ntBASIC1.4□□□□□ -2.19
ZSWIM3Q96MP5 AC140658.3-201ENST00000567603 271 ntBASIC1.4□□□□□ -2.19
ZSWIM3Q96MP5 MIR548H5-201ENST00000580314 60 ntBASIC1.4□□□□□ -2.19
ZSWIM3Q96MP5 MIR4676-201ENST00000583078 72 ntBASIC1.4□□□□□ -2.19
ZSWIM3Q96MP5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
ZSWIM3Q96MP5 MIR96-201ENST00000362288 78 ntBASIC1.39□□□□□ -2.19
ZSWIM3Q96MP5 Y_RNA.316-201ENST00000365118 111 ntBASIC1.39□□□□□ -2.19
ZSWIM3Q96MP5 SNORD114-22-201ENST00000365423 72 ntBASIC1.39□□□□□ -2.19
ZSWIM3Q96MP5 Y_RNA.437-201ENST00000384113 113 ntBASIC1.39□□□□□ -2.19
ZSWIM3Q96MP5 MIR518E-201ENST00000385252 88 ntBASIC1.39□□□□□ -2.19
ZSWIM3Q96MP5 MIR1236-201ENST00000408340 102 ntBASIC1.39□□□□□ -2.19
ZSWIM3Q96MP5 AC093729.1-201ENST00000513074 128 ntBASIC1.39□□□□□ -2.19
ZSWIM3Q96MP5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.39□□□□□ -2.19
ZSWIM3Q96MP5 MIR7974-201ENST00000615835 79 ntBASIC1.39□□□□□ -2.19
ZSWIM3Q96MP5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.38□□□□□ -2.19
ZSWIM3Q96MP5 MIR101-2-201ENST00000362195 79 ntBASIC1.38□□□□□ -2.19
ZSWIM3Q96MP5 RNU6-1260P-201ENST00000362944 107 ntBASIC1.38□□□□□ -2.19
ZSWIM3Q96MP5 Y_RNA.313-201ENST00000365095 103 ntBASIC1.38□□□□□ -2.19
ZSWIM3Q96MP5 MIR635-201ENST00000384830 98 ntBASIC1.38□□□□□ -2.19
ZSWIM3Q96MP5 AC097635.1-201ENST00000450678 155 ntBASIC1.38□□□□□ -2.19
ZSWIM3Q96MP5 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.38□□□□□ -2.19
ZSWIM3Q96MP5 RNU6-448P-201ENST00000517052 107 ntBASIC1.38□□□□□ -2.19
ZSWIM3Q96MP5 MIR489-201ENST00000384923 84 ntBASIC1.37□□□□□ -2.19
ZSWIM3Q96MP5 AC092628.1-201ENST00000436250 252 ntBASIC1.37□□□□□ -2.19
ZSWIM3Q96MP5 RNU7-156P-201ENST00000517214 74 ntBASIC1.37□□□□□ -2.19
ZSWIM3Q96MP5 MIR4452-201ENST00000583004 71 ntBASIC1.37□□□□□ -2.19
ZSWIM3Q96MP5 MIR3660-201ENST00000584845 100 ntBASIC1.37□□□□□ -2.19
ZSWIM3Q96MP5 MIR6078-201ENST00000611069 100 ntBASIC1.37□□□□□ -2.19
ZSWIM3Q96MP5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
ZSWIM3Q96MP5 SNORA40.6-201ENST00000391153 128 ntBASIC1.36□□□□□ -2.19
ZSWIM3Q96MP5 RNU6-466P-201ENST00000391224 103 ntBASIC1.36□□□□□ -2.19
ZSWIM3Q96MP5 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
ZSWIM3Q96MP5 MIR938-201ENST00000401216 83 ntBASIC1.36□□□□□ -2.19
ZSWIM3Q96MP5 RNU7-195P-201ENST00000458793 62 ntBASIC1.36□□□□□ -2.19
ZSWIM3Q96MP5 RNU6-857P-201ENST00000515893 110 ntBASIC1.36□□□□□ -2.19
ZSWIM3Q96MP5 MIR4804-201ENST00000581683 73 ntBASIC1.36□□□□□ -2.19
ZSWIM3Q96MP5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
ZSWIM3Q96MP5 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
ZSWIM3Q96MP5 RNU4-32P-201ENST00000363404 141 ntBASIC1.35□□□□□ -2.19
ZSWIM3Q96MP5 SNORD115-37-201ENST00000363768 82 ntBASIC1.35□□□□□ -2.19
ZSWIM3Q96MP5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
ZSWIM3Q96MP5 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
ZSWIM3Q96MP5 SNORA70.22-201ENST00000517160 124 ntBASIC1.35□□□□□ -2.19
ZSWIM3Q96MP5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
ZSWIM3Q96MP5 MIR26B-201ENST00000362251 77 ntBASIC1.34□□□□□ -2.19
ZSWIM3Q96MP5 RNU6-811P-201ENST00000384069 107 ntBASIC1.34□□□□□ -2.19
ZSWIM3Q96MP5 RNU6-291P-201ENST00000384720 107 ntBASIC1.34□□□□□ -2.19
ZSWIM3Q96MP5 MIR1827-201ENST00000408549 66 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 205.9 ms