Protein–RNA interactions for Protein: Q96JC1

VPS39, Vam6/Vps39-like protein, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS39Q96JC1 RNU6-929P-201ENST00000384429 107 ntBASIC-0.1□□□□□ -2.43
VPS39Q96JC1 MIR1263-201ENST00000408324 86 ntBASIC-0.1□□□□□ -2.43
VPS39Q96JC1 MIR548I2-201ENST00000408348 149 ntBASIC-0.1□□□□□ -2.43
VPS39Q96JC1 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.1□□□□□ -2.43
VPS39Q96JC1 RNU6-850P-201ENST00000516934 103 ntBASIC-0.1□□□□□ -2.43
VPS39Q96JC1 MIR5706-201ENST00000579841 80 ntBASIC-0.1□□□□□ -2.43
VPS39Q96JC1 MIR3920-201ENST00000581751 86 ntBASIC-0.1□□□□□ -2.43
VPS39Q96JC1 RNU6-170P-201ENST00000362832 104 ntBASIC-0.11□□□□□ -2.43
VPS39Q96JC1 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.11□□□□□ -2.43
VPS39Q96JC1 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.11□□□□□ -2.43
VPS39Q96JC1 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.11□□□□□ -2.43
VPS39Q96JC1 MIR516A2-201ENST00000384888 90 ntBASIC-0.11□□□□□ -2.43
VPS39Q96JC1 MIR516A1-201ENST00000385033 90 ntBASIC-0.11□□□□□ -2.43
VPS39Q96JC1 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
VPS39Q96JC1 MIR4677-201ENST00000584153 80 ntBASIC-0.11□□□□□ -2.43
VPS39Q96JC1 MIR548AD-201ENST00000584780 82 ntBASIC-0.11□□□□□ -2.43
VPS39Q96JC1 MIR2909-201ENST00000617113 69 ntBASIC-0.11□□□□□ -2.43
VPS39Q96JC1 MIR106A-201ENST00000384870 81 ntBASIC-0.12□□□□□ -2.43
VPS39Q96JC1 HMGN2P22-201ENST00000427588 175 ntBASIC-0.12□□□□□ -2.43
VPS39Q96JC1 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.12□□□□□ -2.43
VPS39Q96JC1 RNU6-781P-201ENST00000516377 101 ntBASIC-0.12□□□□□ -2.43
VPS39Q96JC1 RNU6-161P-201ENST00000363051 106 ntBASIC-0.13□□□□□ -2.43
VPS39Q96JC1 SNORD115-19-201ENST00000363098 82 ntBASIC-0.13□□□□□ -2.43
VPS39Q96JC1 SNORD115-18-201ENST00000363293 82 ntBASIC-0.13□□□□□ -2.43
VPS39Q96JC1 SNORD115-17-201ENST00000364612 82 ntBASIC-0.13□□□□□ -2.43
VPS39Q96JC1 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.13□□□□□ -2.43
VPS39Q96JC1 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.13□□□□□ -2.43
VPS39Q96JC1 MIR513C-201ENST00000401352 84 ntBASIC-0.13□□□□□ -2.43
VPS39Q96JC1 AL078595.1-201ENST00000404458 226 ntBASIC-0.13□□□□□ -2.43
VPS39Q96JC1 SNORD110-201ENST00000408189 75 ntBASIC-0.13□□□□□ -2.43
VPS39Q96JC1 SNORA7.5-201ENST00000410672 110 ntBASIC-0.13□□□□□ -2.43
VPS39Q96JC1 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.13□□□□□ -2.43
VPS39Q96JC1 MTND5P41-201ENST00000517498 206 ntBASIC-0.13□□□□□ -2.43
VPS39Q96JC1 MIR3144-201ENST00000579460 79 ntBASIC-0.13□□□□□ -2.43
VPS39Q96JC1 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.14□□□□□ -2.43
VPS39Q96JC1 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.14□□□□□ -2.43
VPS39Q96JC1 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.14□□□□□ -2.43
VPS39Q96JC1 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.14□□□□□ -2.43
VPS39Q96JC1 MIR519A1-201ENST00000385257 85 ntBASIC-0.14□□□□□ -2.43
VPS39Q96JC1 RNA5SP163-201ENST00000410304 99 ntBASIC-0.14□□□□□ -2.43
VPS39Q96JC1 AC006210.1-201ENST00000424882 111 ntBASIC-0.14□□□□□ -2.43
VPS39Q96JC1 AL161932.1-201ENST00000437408 146 ntBASIC-0.14□□□□□ -2.43
VPS39Q96JC1 RNU7-13P-201ENST00000516413 62 ntBASIC-0.14□□□□□ -2.43
VPS39Q96JC1 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.14□□□□□ -2.43
VPS39Q96JC1 AP001328.1-201ENST00000528550 176 ntBASIC-0.14□□□□□ -2.43
VPS39Q96JC1 MIR548AG2-201ENST00000581228 64 ntBASIC-0.14□□□□□ -2.43
VPS39Q96JC1 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.15□□□□□ -2.43
VPS39Q96JC1 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.15□□□□□ -2.43
VPS39Q96JC1 RNU6-652P-201ENST00000365488 107 ntBASIC-0.15□□□□□ -2.43
VPS39Q96JC1 RNU6-571P-201ENST00000384128 107 ntBASIC-0.15□□□□□ -2.43
VPS39Q96JC1 MIR548X2-201ENST00000579776 100 ntBASIC-0.15□□□□□ -2.43
VPS39Q96JC1 MIR3163-201ENST00000581592 73 ntBASIC-0.15□□□□□ -2.43
VPS39Q96JC1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.15□□□□□ -2.43
VPS39Q96JC1 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.16□□□□□ -2.44
VPS39Q96JC1 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.16□□□□□ -2.44
VPS39Q96JC1 AL353813.1-201ENST00000440700 253 ntBASIC-0.16□□□□□ -2.44
VPS39Q96JC1 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.16□□□□□ -2.44
VPS39Q96JC1 AP001340.1-201ENST00000624405 217 ntBASIC-0.16□□□□□ -2.44
VPS39Q96JC1 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.16□□□□□ -2.44
VPS39Q96JC1 AC073869.9-201ENST00000641610 120 ntBASIC-0.16□□□□□ -2.44
VPS39Q96JC1 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.17□□□□□ -2.44
VPS39Q96JC1 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.17□□□□□ -2.44
VPS39Q96JC1 MIR569-201ENST00000385228 96 ntBASIC-0.17□□□□□ -2.44
VPS39Q96JC1 AL158147.1-201ENST00000443970 75 ntBASIC-0.17□□□□□ -2.44
VPS39Q96JC1 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.17□□□□□ -2.44
VPS39Q96JC1 MTND5P40-201ENST00000559945 246 ntBASIC-0.17□□□□□ -2.44
VPS39Q96JC1 RNU6-235P-201ENST00000362644 107 ntBASIC-0.18□□□□□ -2.44
VPS39Q96JC1 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.18□□□□□ -2.44
VPS39Q96JC1 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.18□□□□□ -2.44
VPS39Q96JC1 RNU7-165P-201ENST00000458864 60 ntBASIC-0.18□□□□□ -2.44
VPS39Q96JC1 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.18□□□□□ -2.44
VPS39Q96JC1 AC141557.1-201ENST00000540982 400 ntBASIC-0.18□□□□□ -2.44
VPS39Q96JC1 RNU6-647P-201ENST00000364243 107 ntBASIC-0.19□□□□□ -2.44
VPS39Q96JC1 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.19□□□□□ -2.44
VPS39Q96JC1 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.19□□□□□ -2.44
VPS39Q96JC1 MIR548D2-201ENST00000384955 97 ntBASIC-0.19□□□□□ -2.44
VPS39Q96JC1 RNU7-159P-201ENST00000459284 62 ntBASIC-0.19□□□□□ -2.44
VPS39Q96JC1 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.19□□□□□ -2.44
VPS39Q96JC1 AL512310.12-203ENST00000640543 90 ntBASIC-0.19□□□□□ -2.44
VPS39Q96JC1 RNA5SP257-201ENST00000363023 116 ntBASIC-0.2□□□□□ -2.44
VPS39Q96JC1 RNU6-509P-201ENST00000363519 107 ntBASIC-0.2□□□□□ -2.44
VPS39Q96JC1 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.2□□□□□ -2.44
VPS39Q96JC1 SNORA32.1-201ENST00000364514 115 ntBASIC-0.2□□□□□ -2.44
VPS39Q96JC1 RNU1-141P-201ENST00000364623 158 ntBASIC-0.2□□□□□ -2.44
VPS39Q96JC1 RNU6-886P-201ENST00000384319 105 ntBASIC-0.2□□□□□ -2.44
VPS39Q96JC1 MIR519E-201ENST00000385075 84 ntBASIC-0.2□□□□□ -2.44
VPS39Q96JC1 SPINT5P-201ENST00000448174 155 ntBASIC-0.2□□□□□ -2.44
VPS39Q96JC1 RNU6-426P-201ENST00000516464 97 ntBASIC-0.2□□□□□ -2.44
VPS39Q96JC1 RNU6-180P-201ENST00000516697 61 ntBASIC-0.2□□□□□ -2.44
VPS39Q96JC1 MIR4473-201ENST00000583731 91 ntBASIC-0.2□□□□□ -2.44
VPS39Q96JC1 U7.6-201ENST00000610841 64 ntBASIC-0.2□□□□□ -2.44
VPS39Q96JC1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.2□□□□□ -2.44
VPS39Q96JC1 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.21□□□□□ -2.44
VPS39Q96JC1 MIR516B1-201ENST00000385211 90 ntBASIC-0.21□□□□□ -2.44
VPS39Q96JC1 MIR759-201ENST00000390224 91 ntBASIC-0.21□□□□□ -2.44
VPS39Q96JC1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.21□□□□□ -2.44
VPS39Q96JC1 RNA5SP136-201ENST00000410906 107 ntBASIC-0.21□□□□□ -2.44
VPS39Q96JC1 RNU6-182P-201ENST00000516970 105 ntBASIC-0.21□□□□□ -2.44
VPS39Q96JC1 MIR4743-201ENST00000584576 69 ntBASIC-0.21□□□□□ -2.44
VPS39Q96JC1 AL670379.3-201ENST00000605040 251 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 211.2 ms