Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 RNU6-785P-201ENST00000411324 104 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 BX276092.1-201ENST00000427368 251 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 RNU6-531P-201ENST00000516694 104 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 RNU6-762P-201ENST00000517107 102 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 MIR4771-2-201ENST00000577758 74 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 MIR4771-1-201ENST00000582617 74 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 AC103810.7-201ENST00000607821 91 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 U6.90-201ENST00000614007 104 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 U6.70-201ENST00000620287 104 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 AC023934.1-201ENST00000574529 2389 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
ATP2A3Q93084 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.04□□□□□ -2.24
ATP2A3Q93084 SNORD93-201ENST00000408813 74 ntBASIC1.04□□□□□ -2.24
ATP2A3Q93084 SNRPGP12-201ENST00000449481 213 ntBASIC1.04□□□□□ -2.24
ATP2A3Q93084 ACA64.5-201ENST00000516207 127 ntBASIC1.04□□□□□ -2.24
ATP2A3Q93084 MIR4500-201ENST00000579472 76 ntBASIC1.04□□□□□ -2.24
ATP2A3Q93084 RN7SL793P-201ENST00000583259 296 ntBASIC1.04□□□□□ -2.24
ATP2A3Q93084 MIR8066-201ENST00000617280 78 ntBASIC1.04□□□□□ -2.24
ATP2A3Q93084 MIR1-1-201ENST00000362147 71 ntBASIC1.03□□□□□ -2.24
ATP2A3Q93084 Y_RNA.13-201ENST00000362403 112 ntBASIC1.03□□□□□ -2.24
ATP2A3Q93084 RNU4-38P-201ENST00000364472 129 ntBASIC1.03□□□□□ -2.24
ATP2A3Q93084 RNU6-294P-201ENST00000364999 102 ntBASIC1.03□□□□□ -2.24
ATP2A3Q93084 MIR216A-201ENST00000385063 110 ntBASIC1.03□□□□□ -2.24
ATP2A3Q93084 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.03□□□□□ -2.24
ATP2A3Q93084 SPINT5P-201ENST00000448174 155 ntBASIC1.03□□□□□ -2.24
ATP2A3Q93084 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.03□□□□□ -2.24
ATP2A3Q93084 RNU6-844P-201ENST00000517175 102 ntBASIC1.03□□□□□ -2.24
ATP2A3Q93084 AC096720.1-201ENST00000604441 183 ntBASIC1.03□□□□□ -2.24
ATP2A3Q93084 AL136317.1-201ENST00000612653 226 ntBASIC1.03□□□□□ -2.24
ATP2A3Q93084 RNU6-403P-201ENST00000363163 104 ntBASIC1.02□□□□□ -2.25
ATP2A3Q93084 SNORA72.6-201ENST00000384520 129 ntBASIC1.02□□□□□ -2.25
ATP2A3Q93084 RNU6-813P-201ENST00000384691 107 ntBASIC1.02□□□□□ -2.25
ATP2A3Q93084 Y_RNA.567-201ENST00000384736 106 ntBASIC1.02□□□□□ -2.25
ATP2A3Q93084 MIR532-201ENST00000385025 91 ntBASIC1.02□□□□□ -2.25
ATP2A3Q93084 MIR100-201ENST00000385259 80 ntBASIC1.02□□□□□ -2.25
ATP2A3Q93084 RPS26P5-201ENST00000418544 335 ntBASIC1.02□□□□□ -2.25
ATP2A3Q93084 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
ATP2A3Q93084 AC211469.2-201ENST00000605461 205 ntBASIC1.02□□□□□ -2.25
ATP2A3Q93084 RNU6-90P-201ENST00000606352 106 ntBASIC1.02□□□□□ -2.25
ATP2A3Q93084 MIR6857-201ENST00000613267 93 ntBASIC1.02□□□□□ -2.25
ATP2A3Q93084 AC025521.1-201ENST00000621624 286 ntBASIC1.02□□□□□ -2.25
ATP2A3Q93084 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
ATP2A3Q93084 Y_RNA.42-201ENST00000362660 108 ntBASIC1.01□□□□□ -2.25
ATP2A3Q93084 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
ATP2A3Q93084 MIR181B2-201ENST00000385004 89 ntBASIC1.01□□□□□ -2.25
ATP2A3Q93084 MIR1257-201ENST00000408490 117 ntBASIC1.01□□□□□ -2.25
ATP2A3Q93084 Y_RNA.593-201ENST00000410292 98 ntBASIC1.01□□□□□ -2.25
ATP2A3Q93084 RNU6-887P-201ENST00000410660 100 ntBASIC1.01□□□□□ -2.25
ATP2A3Q93084 Y_RNA.705-201ENST00000516862 110 ntBASIC1.01□□□□□ -2.25
ATP2A3Q93084 RNU6-850P-201ENST00000516934 103 ntBASIC1.01□□□□□ -2.25
ATP2A3Q93084 MTND5P40-201ENST00000559945 246 ntBASIC1.01□□□□□ -2.25
ATP2A3Q93084 MIR4676-201ENST00000583078 72 ntBASIC1.01□□□□□ -2.25
ATP2A3Q93084 AC006254.2-201ENST00000603259 279 ntBASIC1.01□□□□□ -2.25
ATP2A3Q93084 AC008608.1-201ENST00000603910 127 ntBASIC1.01□□□□□ -2.25
ATP2A3Q93084 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.01□□□□□ -2.25
ATP2A3Q93084 SNORD73B-201ENST00000364394 72 ntBASIC1□□□□□ -2.25
ATP2A3Q93084 MIR5000-201ENST00000577717 103 ntBASIC1□□□□□ -2.25
ATP2A3Q93084 AC013244.2-201ENST00000603396 103 ntBASIC1□□□□□ -2.25
ATP2A3Q93084 MIR2052-201ENST00000636055 55 ntBASIC1□□□□□ -2.25
ATP2A3Q93084 Y_RNA.220-201ENST00000364244 109 ntBASIC0.99□□□□□ -2.25
ATP2A3Q93084 SNORD58A-201ENST00000383875 65 ntBASIC0.99□□□□□ -2.25
ATP2A3Q93084 MIR125B2-201ENST00000385128 89 ntBASIC0.99□□□□□ -2.25
ATP2A3Q93084 SNORD89-201ENST00000390981 114 ntBASIC0.99□□□□□ -2.25
ATP2A3Q93084 MIR1827-201ENST00000408549 66 ntBASIC0.99□□□□□ -2.25
ATP2A3Q93084 U7.7-201ENST00000459276 60 ntBASIC0.99□□□□□ -2.25
ATP2A3Q93084 RNA5SP436-201ENST00000516020 115 ntBASIC0.99□□□□□ -2.25
ATP2A3Q93084 RNU6-977P-201ENST00000516411 103 ntBASIC0.99□□□□□ -2.25
ATP2A3Q93084 RNU6-1110P-201ENST00000516462 101 ntBASIC0.99□□□□□ -2.25
ATP2A3Q93084 AC026421.1-201ENST00000519101 163 ntBASIC0.99□□□□□ -2.25
ATP2A3Q93084 AL513043.2-201ENST00000573941 143 ntBASIC0.99□□□□□ -2.25
ATP2A3Q93084 MIR4439-201ENST00000583746 80 ntBASIC0.99□□□□□ -2.25
ATP2A3Q93084 AC062037.1-201ENST00000605302 128 ntBASIC0.99□□□□□ -2.25
ATP2A3Q93084 MIR6082-201ENST00000613604 109 ntBASIC0.99□□□□□ -2.25
ATP2A3Q93084 MIR373-201ENST00000362273 69 ntBASIC0.98□□□□□ -2.25
ATP2A3Q93084 Y_RNA.30-201ENST00000362572 97 ntBASIC0.98□□□□□ -2.25
ATP2A3Q93084 RNU6-267P-201ENST00000516714 103 ntBASIC0.98□□□□□ -2.25
ATP2A3Q93084 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.98□□□□□ -2.25
ATP2A3Q93084 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.98□□□□□ -2.25
ATP2A3Q93084 RNU6-1187P-201ENST00000364771 110 ntBASIC0.97□□□□□ -2.25
ATP2A3Q93084 Y_RNA.388-201ENST00000383919 113 ntBASIC0.97□□□□□ -2.25
ATP2A3Q93084 RNU6-972P-201ENST00000391208 107 ntBASIC0.97□□□□□ -2.25
ATP2A3Q93084 RNU7-102P-201ENST00000458948 62 ntBASIC0.97□□□□□ -2.25
ATP2A3Q93084 RNU7-106P-201ENST00000459514 67 ntBASIC0.97□□□□□ -2.25
ATP2A3Q93084 MIR4804-201ENST00000581683 73 ntBASIC0.97□□□□□ -2.25
ATP2A3Q93084 Y_RNA.17-201ENST00000362433 111 ntBASIC0.96□□□□□ -2.26
ATP2A3Q93084 Y_RNA.178-201ENST00000363832 102 ntBASIC0.96□□□□□ -2.26
ATP2A3Q93084 RNU6-1335P-201ENST00000365426 107 ntBASIC0.96□□□□□ -2.26
ATP2A3Q93084 SNORD38.2-201ENST00000384470 69 ntBASIC0.96□□□□□ -2.26
ATP2A3Q93084 MIR516A2-201ENST00000384888 90 ntBASIC0.96□□□□□ -2.26
ATP2A3Q93084 MIR516A1-201ENST00000385033 90 ntBASIC0.96□□□□□ -2.26
ATP2A3Q93084 SNORD100-201ENST00000408573 76 ntBASIC0.96□□□□□ -2.26
ATP2A3Q93084 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.96□□□□□ -2.26
ATP2A3Q93084 TRAJ51-201ENST00000504127 63 ntBASIC0.96□□□□□ -2.26
ATP2A3Q93084 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.96□□□□□ -2.26
ATP2A3Q93084 RNU7-156P-201ENST00000517214 74 ntBASIC0.96□□□□□ -2.26
ATP2A3Q93084 AC025627.3-201ENST00000582078 182 ntBASIC0.96□□□□□ -2.26
ATP2A3Q93084 SNORD92-201ENST00000585078 85 ntBASIC0.96□□□□□ -2.26
ATP2A3Q93084 Y_RNA.57-201ENST00000362806 113 ntBASIC0.95□□□□□ -2.26
ATP2A3Q93084 Y_RNA.73-201ENST00000362910 113 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms