Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 SNORD14C-201ENST00000365382 88 ntBASIC-0.53□□□□□ -2.49
UFD1Q92890 SNORD115-44-201ENST00000365391 82 ntBASIC-0.53□□□□□ -2.49
UFD1Q92890 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.53□□□□□ -2.49
UFD1Q92890 MIR34C-201ENST00000384831 77 ntBASIC-0.53□□□□□ -2.49
UFD1Q92890 MIR519E-201ENST00000385075 84 ntBASIC-0.53□□□□□ -2.49
UFD1Q92890 SNORD37.2-201ENST00000391075 66 ntBASIC-0.53□□□□□ -2.49
UFD1Q92890 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.53□□□□□ -2.49
UFD1Q92890 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.53□□□□□ -2.49
UFD1Q92890 MIR548AG2-201ENST00000581228 64 ntBASIC-0.53□□□□□ -2.49
UFD1Q92890 MIR4636-201ENST00000582271 80 ntBASIC-0.53□□□□□ -2.49
UFD1Q92890 RN7SL660P-201ENST00000614852 299 ntBASIC-0.53□□□□□ -2.49
UFD1Q92890 AC069503.3-201ENST00000618674 145 ntBASIC-0.53□□□□□ -2.49
UFD1Q92890 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.54□□□□□ -2.5
UFD1Q92890 SNORA20.1-201ENST00000364790 130 ntBASIC-0.54□□□□□ -2.5
UFD1Q92890 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.54□□□□□ -2.5
UFD1Q92890 MIR617-201ENST00000385030 97 ntBASIC-0.54□□□□□ -2.5
UFD1Q92890 MIR568-201ENST00000385036 95 ntBASIC-0.54□□□□□ -2.5
UFD1Q92890 AC244250.2-201ENST00000418731 148 ntBASIC-0.54□□□□□ -2.5
UFD1Q92890 SNORD126-201ENST00000459475 77 ntBASIC-0.54□□□□□ -2.5
UFD1Q92890 MIR4493-201ENST00000584016 73 ntBASIC-0.54□□□□□ -2.5
UFD1Q92890 MIR4263-201ENST00000584745 83 ntBASIC-0.54□□□□□ -2.5
UFD1Q92890 AC108081.1-201ENST00000604358 221 ntBASIC-0.54□□□□□ -2.5
UFD1Q92890 MIR3658-201ENST00000636291 56 ntBASIC-0.54□□□□□ -2.5
UFD1Q92890 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.54□□□□□ -2.5
UFD1Q92890 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.55□□□□□ -2.5
UFD1Q92890 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.55□□□□□ -2.5
UFD1Q92890 U8.6-201ENST00000364939 135 ntBASIC-0.55□□□□□ -2.5
UFD1Q92890 RNU6-811P-201ENST00000384069 107 ntBASIC-0.55□□□□□ -2.5
UFD1Q92890 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.55□□□□□ -2.5
UFD1Q92890 AC093423.1-201ENST00000440817 142 ntBASIC-0.55□□□□□ -2.5
UFD1Q92890 RNU7-121P-201ENST00000516604 62 ntBASIC-0.55□□□□□ -2.5
UFD1Q92890 RNU7-188P-201ENST00000517063 64 ntBASIC-0.55□□□□□ -2.5
UFD1Q92890 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.55□□□□□ -2.5
UFD1Q92890 MIR6507-201ENST00000613630 70 ntBASIC-0.55□□□□□ -2.5
UFD1Q92890 FTX_2.1-201ENST00000618816 94 ntBASIC-0.55□□□□□ -2.5
UFD1Q92890 AC087741.2-201ENST00000619415 172 ntBASIC-0.55□□□□□ -2.5
UFD1Q92890 RNU4-84P-201ENST00000364200 139 ntBASIC-0.56□□□□□ -2.5
UFD1Q92890 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.56□□□□□ -2.5
UFD1Q92890 MIR516A2-201ENST00000384888 90 ntBASIC-0.56□□□□□ -2.5
UFD1Q92890 MIR516A1-201ENST00000385033 90 ntBASIC-0.56□□□□□ -2.5
UFD1Q92890 RNA5SP451-201ENST00000410588 110 ntBASIC-0.56□□□□□ -2.5
UFD1Q92890 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.56□□□□□ -2.5
UFD1Q92890 YWHAEP2-201ENST00000580066 112 ntBASIC-0.56□□□□□ -2.5
UFD1Q92890 uc_338.10-201ENST00000621872 182 ntBASIC-0.56□□□□□ -2.5
UFD1Q92890 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.57□□□□□ -2.5
UFD1Q92890 MIR181B2-201ENST00000385004 89 ntBASIC-0.57□□□□□ -2.5
UFD1Q92890 MIR1912-201ENST00000410389 80 ntBASIC-0.57□□□□□ -2.5
UFD1Q92890 RNU7-6P-201ENST00000516845 62 ntBASIC-0.57□□□□□ -2.5
UFD1Q92890 AC022559.1-201ENST00000520905 205 ntBASIC-0.57□□□□□ -2.5
UFD1Q92890 MIR4788-201ENST00000639104 80 ntBASIC-0.57□□□□□ -2.5
UFD1Q92890 MIR655-201ENST00000362159 97 ntBASIC-0.58□□□□□ -2.5
UFD1Q92890 SNORD115-19-201ENST00000363098 82 ntBASIC-0.58□□□□□ -2.5
UFD1Q92890 SNORD115-18-201ENST00000363293 82 ntBASIC-0.58□□□□□ -2.5
UFD1Q92890 RNA5SP368-201ENST00000364298 116 ntBASIC-0.58□□□□□ -2.5
UFD1Q92890 SNORD115-17-201ENST00000364612 82 ntBASIC-0.58□□□□□ -2.5
UFD1Q92890 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.58□□□□□ -2.5
UFD1Q92890 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.58□□□□□ -2.5
UFD1Q92890 SNORD38.2-201ENST00000384470 69 ntBASIC-0.58□□□□□ -2.5
UFD1Q92890 MIR604-201ENST00000384880 94 ntBASIC-0.58□□□□□ -2.5
UFD1Q92890 MIR196A2-201ENST00000385189 110 ntBASIC-0.58□□□□□ -2.5
UFD1Q92890 SNORD75.1-201ENST00000408373 60 ntBASIC-0.58□□□□□ -2.5
UFD1Q92890 RPS29P8-201ENST00000445109 171 ntBASIC-0.58□□□□□ -2.5
UFD1Q92890 RNU6-521P-201ENST00000516663 105 ntBASIC-0.58□□□□□ -2.5
UFD1Q92890 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.58□□□□□ -2.5
UFD1Q92890 RNA5SP205-201ENST00000364653 136 ntBASIC-0.59□□□□□ -2.5
UFD1Q92890 MIR2113-201ENST00000459007 91 ntBASIC-0.59□□□□□ -2.5
UFD1Q92890 MIR4460-201ENST00000577862 86 ntBASIC-0.59□□□□□ -2.5
UFD1Q92890 MIR3163-201ENST00000581592 73 ntBASIC-0.6□□□□□ -2.51
UFD1Q92890 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.6□□□□□ -2.51
UFD1Q92890 SNORD114-29-201ENST00000364819 70 ntBASIC-0.61□□□□□ -2.51
UFD1Q92890 SNORA51.5-201ENST00000384126 131 ntBASIC-0.61□□□□□ -2.51
UFD1Q92890 RNU6-287P-201ENST00000516230 98 ntBASIC-0.61□□□□□ -2.51
UFD1Q92890 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.61□□□□□ -2.51
UFD1Q92890 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.62□□□□□ -2.51
UFD1Q92890 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.62□□□□□ -2.51
UFD1Q92890 MIR224-201ENST00000384889 81 ntBASIC-0.62□□□□□ -2.51
UFD1Q92890 MT-TI-201ENST00000387365 69 ntBASIC-0.62□□□□□ -2.51
UFD1Q92890 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.62□□□□□ -2.51
UFD1Q92890 RNU6-735P-201ENST00000410612 107 ntBASIC-0.62□□□□□ -2.51
UFD1Q92890 RNU6-284P-201ENST00000411105 106 ntBASIC-0.62□□□□□ -2.51
UFD1Q92890 AL118496.2-201ENST00000448300 230 ntBASIC-0.62□□□□□ -2.51
UFD1Q92890 AC130289.1-201ENST00000577321 73 ntBASIC-0.62□□□□□ -2.51
UFD1Q92890 MIR548AE1-201ENST00000583292 70 ntBASIC-0.62□□□□□ -2.51
UFD1Q92890 AC072026.1-201ENST00000605023 201 ntBASIC-0.62□□□□□ -2.51
UFD1Q92890 U4.1-201ENST00000620349 87 ntBASIC-0.62□□□□□ -2.51
UFD1Q92890 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.62□□□□□ -2.51
UFD1Q92890 RNU6-327P-201ENST00000516270 127 ntBASIC-0.63□□□□□ -2.51
UFD1Q92890 RNU6-758P-201ENST00000516292 89 ntBASIC-0.63□□□□□ -2.51
UFD1Q92890 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.63□□□□□ -2.51
UFD1Q92890 TRDV1-202ENST00000621643 102 ntBASIC-0.63□□□□□ -2.51
UFD1Q92890 AC021753.1-201ENST00000635724 168 ntBASIC-0.63□□□□□ -2.51
UFD1Q92890 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.64□□□□□ -2.51
UFD1Q92890 RNU6-154P-201ENST00000384306 106 ntBASIC-0.64□□□□□ -2.51
UFD1Q92890 MT-TY-201ENST00000387409 66 ntBASIC-0.64□□□□□ -2.51
UFD1Q92890 RNU6-243P-201ENST00000391140 107 ntBASIC-0.64□□□□□ -2.51
UFD1Q92890 RNU6-175P-201ENST00000516896 107 ntBASIC-0.64□□□□□ -2.51
UFD1Q92890 AL590491.3-201ENST00000610731 82 ntBASIC-0.64□□□□□ -2.51
UFD1Q92890 MIR539-201ENST00000365690 78 ntBASIC-0.65□□□□□ -2.51
UFD1Q92890 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.65□□□□□ -2.51
UFD1Q92890 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms