Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC087741.2-201ENST00000619415 172 ntBASIC0.07□□□□□ -2.4
SHROOM3Q8TF72 RNU6-80P-201ENST00000384195 107 ntBASIC0.06□□□□□ -2.4
SHROOM3Q8TF72 SNORD38.2-201ENST00000384470 69 ntBASIC0.06□□□□□ -2.4
SHROOM3Q8TF72 Y_RNA.507-201ENST00000384500 99 ntBASIC0.06□□□□□ -2.4
SHROOM3Q8TF72 MIR759-201ENST00000390224 91 ntBASIC0.06□□□□□ -2.4
SHROOM3Q8TF72 RNA5SP268-201ENST00000516828 124 ntBASIC0.06□□□□□ -2.4
SHROOM3Q8TF72 MTND5P41-201ENST00000517498 206 ntBASIC0.06□□□□□ -2.4
SHROOM3Q8TF72 AC090425.1-201ENST00000610007 140 ntBASIC0.06□□□□□ -2.4
SHROOM3Q8TF72 SNORA42.1-201ENST00000363515 137 ntBASIC0.06□□□□□ -2.4
SHROOM3Q8TF72 SNORD114-9-201ENST00000364370 72 ntBASIC0.06□□□□□ -2.4
SHROOM3Q8TF72 MIR516A2-201ENST00000384888 90 ntBASIC0.06□□□□□ -2.4
SHROOM3Q8TF72 MIR516A1-201ENST00000385033 90 ntBASIC0.06□□□□□ -2.4
SHROOM3Q8TF72 MIR610-201ENST00000385139 96 ntBASIC0.06□□□□□ -2.4
SHROOM3Q8TF72 MIR501-201ENST00000390204 84 ntBASIC0.06□□□□□ -2.4
SHROOM3Q8TF72 RNA5SP272-201ENST00000516095 111 ntBASIC0.06□□□□□ -2.4
SHROOM3Q8TF72 MIR1255B1-201ENST00000636325 63 ntBASIC0.06□□□□□ -2.4
SHROOM3Q8TF72 RNY1P11-201ENST00000363759 113 ntBASIC0.05□□□□□ -2.4
SHROOM3Q8TF72 Y_RNA.213-201ENST00000364178 111 ntBASIC0.05□□□□□ -2.4
SHROOM3Q8TF72 RNU6-915P-201ENST00000364943 103 ntBASIC0.05□□□□□ -2.4
SHROOM3Q8TF72 RNU6-1318P-201ENST00000365389 103 ntBASIC0.05□□□□□ -2.4
SHROOM3Q8TF72 Y_RNA.441-201ENST00000384123 112 ntBASIC0.05□□□□□ -2.4
SHROOM3Q8TF72 Y_RNA.497-201ENST00000384447 98 ntBASIC0.05□□□□□ -2.4
SHROOM3Q8TF72 MIR617-201ENST00000385030 97 ntBASIC0.05□□□□□ -2.4
SHROOM3Q8TF72 RNU6-1061P-201ENST00000516530 99 ntBASIC0.05□□□□□ -2.4
SHROOM3Q8TF72 RNU6-182P-201ENST00000516970 105 ntBASIC0.05□□□□□ -2.4
SHROOM3Q8TF72 MIR8066-201ENST00000617280 78 ntBASIC0.05□□□□□ -2.4
SHROOM3Q8TF72 Y_RNA.32-201ENST00000362589 110 ntBASIC0.05□□□□□ -2.4
SHROOM3Q8TF72 SNORD114-31-201ENST00000363219 75 ntBASIC0.05□□□□□ -2.4
SHROOM3Q8TF72 Y_RNA.119-201ENST00000363301 96 ntBASIC0.05□□□□□ -2.4
SHROOM3Q8TF72 Y_RNA.344-201ENST00000365381 112 ntBASIC0.05□□□□□ -2.4
SHROOM3Q8TF72 SCARNA16.5-201ENST00000517114 183 ntBASIC0.05□□□□□ -2.4
SHROOM3Q8TF72 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.05□□□□□ -2.4
SHROOM3Q8TF72 RNU6-291P-201ENST00000384720 107 ntBASIC0.04□□□□□ -2.4
SHROOM3Q8TF72 HMGN2P22-201ENST00000427588 175 ntBASIC0.04□□□□□ -2.4
SHROOM3Q8TF72 AC069271.1-201ENST00000445577 156 ntBASIC0.04□□□□□ -2.4
SHROOM3Q8TF72 RNU6-1211P-201ENST00000459179 105 ntBASIC0.04□□□□□ -2.4
SHROOM3Q8TF72 MIR548AD-201ENST00000584780 82 ntBASIC0.04□□□□□ -2.4
SHROOM3Q8TF72 SNORA70.25-201ENST00000612741 95 ntBASIC0.04□□□□□ -2.4
SHROOM3Q8TF72 Y_RNA.35-201ENST00000362601 101 ntBASIC0.03□□□□□ -2.4
SHROOM3Q8TF72 Y_RNA.56-201ENST00000362798 112 ntBASIC0.03□□□□□ -2.4
SHROOM3Q8TF72 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
SHROOM3Q8TF72 Y_RNA.127-201ENST00000363386 109 ntBASIC0.03□□□□□ -2.4
SHROOM3Q8TF72 Y_RNA.323-201ENST00000365157 109 ntBASIC0.03□□□□□ -2.4
SHROOM3Q8TF72 MIR516B1-201ENST00000385211 90 ntBASIC0.03□□□□□ -2.4
SHROOM3Q8TF72 RNU6-1307P-201ENST00000391012 103 ntBASIC0.03□□□□□ -2.4
SHROOM3Q8TF72 MIR1468-201ENST00000410600 86 ntBASIC0.03□□□□□ -2.4
SHROOM3Q8TF72 Y_RNA.630-201ENST00000411370 108 ntBASIC0.03□□□□□ -2.4
SHROOM3Q8TF72 SUMO1P3-201ENST00000439961 304 ntBASIC0.03□□□□□ -2.4
SHROOM3Q8TF72 AC244505.6-201ENST00000452829 130 ntBASIC0.03□□□□□ -2.4
SHROOM3Q8TF72 RNU6-772P-201ENST00000516042 105 ntBASIC0.03□□□□□ -2.4
SHROOM3Q8TF72 MIR5706-201ENST00000579841 80 ntBASIC0.03□□□□□ -2.4
SHROOM3Q8TF72 MIR6828-201ENST00000636181 60 ntBASIC0.03□□□□□ -2.4
SHROOM3Q8TF72 Y_RNA.120-201ENST00000363304 110 ntBASIC0.03□□□□□ -2.41
SHROOM3Q8TF72 RNU6-209P-201ENST00000384118 107 ntBASIC0.03□□□□□ -2.41
SHROOM3Q8TF72 MIR593-201ENST00000384856 100 ntBASIC0.03□□□□□ -2.41
SHROOM3Q8TF72 MIR548I2-201ENST00000408348 149 ntBASIC0.03□□□□□ -2.41
SHROOM3Q8TF72 MIR548H2-201ENST00000408874 88 ntBASIC0.03□□□□□ -2.41
SHROOM3Q8TF72 snoU13.11-201ENST00000459219 104 ntBASIC0.03□□□□□ -2.41
SHROOM3Q8TF72 Y_RNA.660-201ENST00000516002 120 ntBASIC0.03□□□□□ -2.41
SHROOM3Q8TF72 RNU6-782P-201ENST00000516852 104 ntBASIC0.03□□□□□ -2.41
SHROOM3Q8TF72 MIR3163-201ENST00000581592 73 ntBASIC0.03□□□□□ -2.41
SHROOM3Q8TF72 AL162726.3-218ENST00000636401 95 ntBASIC0.03□□□□□ -2.41
SHROOM3Q8TF72 Y_RNA.328-201ENST00000365208 113 ntBASIC0.02□□□□□ -2.41
SHROOM3Q8TF72 SNORA75.1-201ENST00000391130 148 ntBASIC0.02□□□□□ -2.41
SHROOM3Q8TF72 RNU6-781P-201ENST00000516377 101 ntBASIC0.02□□□□□ -2.41
SHROOM3Q8TF72 MTND5P40-201ENST00000559945 246 ntBASIC0.02□□□□□ -2.41
SHROOM3Q8TF72 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.02□□□□□ -2.41
SHROOM3Q8TF72 MIR4677-201ENST00000584153 80 ntBASIC0.02□□□□□ -2.41
SHROOM3Q8TF72 MIR101-1-201ENST00000362265 75 ntBASIC0.01□□□□□ -2.41
SHROOM3Q8TF72 RNU6-1260P-201ENST00000362944 107 ntBASIC0.01□□□□□ -2.41
SHROOM3Q8TF72 Y_RNA.155-201ENST00000363632 101 ntBASIC0.01□□□□□ -2.41
SHROOM3Q8TF72 Y_RNA.488-201ENST00000384403 102 ntBASIC0.01□□□□□ -2.41
SHROOM3Q8TF72 RNU6-929P-201ENST00000384429 107 ntBASIC0.01□□□□□ -2.41
SHROOM3Q8TF72 RNU6-1018P-201ENST00000516577 106 ntBASIC0.01□□□□□ -2.41
SHROOM3Q8TF72 MIR548X2-201ENST00000579776 100 ntBASIC0.01□□□□□ -2.41
SHROOM3Q8TF72 AP001362.1-201ENST00000625165 124 ntBASIC0.01□□□□□ -2.41
SHROOM3Q8TF72 AL512310.12-203ENST00000640543 90 ntBASIC0.01□□□□□ -2.41
SHROOM3Q8TF72 SNORD115-24-201ENST00000363528 82 ntBASIC0.01□□□□□ -2.41
SHROOM3Q8TF72 RNU6-804P-201ENST00000384286 107 ntBASIC0.01□□□□□ -2.41
SHROOM3Q8TF72 Y_RNA.525-201ENST00000384570 113 ntBASIC0.01□□□□□ -2.41
SHROOM3Q8TF72 Y_RNA.528-201ENST00000384575 108 ntBASIC0.01□□□□□ -2.41
SHROOM3Q8TF72 SNORD110-201ENST00000408189 75 ntBASIC0.01□□□□□ -2.41
SHROOM3Q8TF72 RNU7-195P-201ENST00000458793 62 ntBASIC0.01□□□□□ -2.41
SHROOM3Q8TF72 RNU6-1234P-201ENST00000516877 103 ntBASIC0.01□□□□□ -2.41
SHROOM3Q8TF72 SCARNA11.2-201ENST00000517183 154 ntBASIC0.01□□□□□ -2.41
SHROOM3Q8TF72 Y_RNA.773-201ENST00000607168 90 ntBASIC0.01□□□□□ -2.41
SHROOM3Q8TF72 RNU6-235P-201ENST00000362644 107 ntBASIC0□□□□□ -2.41
SHROOM3Q8TF72 RNU6-363P-201ENST00000362895 105 ntBASIC0□□□□□ -2.41
SHROOM3Q8TF72 MIR214-201ENST00000385214 110 ntBASIC0□□□□□ -2.41
SHROOM3Q8TF72 MIR1263-201ENST00000408324 86 ntBASIC0□□□□□ -2.41
SHROOM3Q8TF72 SNORD63B-201ENST00000411005 70 ntBASIC0□□□□□ -2.41
SHROOM3Q8TF72 RPL39P34-201ENST00000477141 156 ntBASIC0□□□□□ -2.41
SHROOM3Q8TF72 AL442128.1-201ENST00000615151 90 ntBASIC0□□□□□ -2.41
SHROOM3Q8TF72 U6.100-201ENST00000636230 99 ntBASIC0□□□□□ -2.41
SHROOM3Q8TF72 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.01□□□□□ -2.41
SHROOM3Q8TF72 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.01□□□□□ -2.41
SHROOM3Q8TF72 SNORD41.1-201ENST00000391000 69 ntBASIC-0.01□□□□□ -2.41
SHROOM3Q8TF72 RNU6-269P-201ENST00000391077 97 ntBASIC-0.01□□□□□ -2.41
SHROOM3Q8TF72 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.01□□□□□ -2.41
SHROOM3Q8TF72 RNU6-394P-201ENST00000410735 107 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 282.4 ms