Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 SNORD111.1-201ENST00000516421 86 ntBASIC1.67□□□□□ -2.14
SH3RF3Q8TEJ3 AP003716.2-201ENST00000528260 108 ntBASIC1.67□□□□□ -2.14
SH3RF3Q8TEJ3 AC104996.3-201ENST00000590718 94 ntBASIC1.67□□□□□ -2.14
SH3RF3Q8TEJ3 RNA5SP48-201ENST00000363969 126 ntBASIC1.66□□□□□ -2.14
SH3RF3Q8TEJ3 RNU1-78P-201ENST00000391248 165 ntBASIC1.66□□□□□ -2.14
SH3RF3Q8TEJ3 MIR4536-1-201ENST00000583537 88 ntBASIC1.66□□□□□ -2.14
SH3RF3Q8TEJ3 AL157834.3-201ENST00000615543 103 ntBASIC1.66□□□□□ -2.14
SH3RF3Q8TEJ3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.65□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-540P-201ENST00000384622 101 ntBASIC1.65□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-1254P-201ENST00000391266 104 ntBASIC1.65□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-1165P-201ENST00000410119 107 ntBASIC1.65□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-322P-201ENST00000516010 103 ntBASIC1.65□□□□□ -2.15
SH3RF3Q8TEJ3 AL078603.1-201ENST00000603824 313 ntBASIC1.65□□□□□ -2.15
SH3RF3Q8TEJ3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SH3RF3Q8TEJ3 MIR6734-201ENST00000621166 68 ntBASIC1.65□□□□□ -2.15
SH3RF3Q8TEJ3 SNORA25.3-201ENST00000363205 127 ntBASIC1.64□□□□□ -2.15
SH3RF3Q8TEJ3 RNA5SP325-201ENST00000363756 130 ntBASIC1.64□□□□□ -2.15
SH3RF3Q8TEJ3 Y_RNA.340-201ENST00000365330 92 ntBASIC1.64□□□□□ -2.15
SH3RF3Q8TEJ3 Y_RNA.588-201ENST00000391254 102 ntBASIC1.64□□□□□ -2.15
SH3RF3Q8TEJ3 AL353770.2-201ENST00000620024 78 ntBASIC1.64□□□□□ -2.15
SH3RF3Q8TEJ3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
SH3RF3Q8TEJ3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
SH3RF3Q8TEJ3 MIRLET7F1-201ENST00000362202 87 ntBASIC1.63□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-957P-201ENST00000363652 99 ntBASIC1.63□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-392P-201ENST00000364926 101 ntBASIC1.63□□□□□ -2.15
SH3RF3Q8TEJ3 Y_RNA.491-201ENST00000384417 107 ntBASIC1.63□□□□□ -2.15
SH3RF3Q8TEJ3 Y_RNA.540-201ENST00000384638 111 ntBASIC1.63□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-205P-201ENST00000390858 107 ntBASIC1.63□□□□□ -2.15
SH3RF3Q8TEJ3 SNORD77.2-201ENST00000391045 68 ntBASIC1.63□□□□□ -2.15
SH3RF3Q8TEJ3 snoU13.17-201ENST00000458802 104 ntBASIC1.63□□□□□ -2.15
SH3RF3Q8TEJ3 MIR2113-201ENST00000459007 91 ntBASIC1.63□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-70P-201ENST00000516438 60 ntBASIC1.63□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-922P-201ENST00000516753 99 ntBASIC1.63□□□□□ -2.15
SH3RF3Q8TEJ3 SNORA77B-201ENST00000578179 125 ntBASIC1.63□□□□□ -2.15
SH3RF3Q8TEJ3 MIR4264-201ENST00000583520 66 ntBASIC1.63□□□□□ -2.15
SH3RF3Q8TEJ3 MIR6504-201ENST00000613520 61 ntBASIC1.63□□□□□ -2.15
SH3RF3Q8TEJ3 RNU5F-1-201ENST00000362507 117 ntBASIC1.62□□□□□ -2.15
SH3RF3Q8TEJ3 SNORD115-31-201ENST00000365318 82 ntBASIC1.62□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-396P-201ENST00000365369 105 ntBASIC1.62□□□□□ -2.15
SH3RF3Q8TEJ3 MIR513A1-201ENST00000385138 129 ntBASIC1.62□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.62□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-243P-201ENST00000391140 107 ntBASIC1.62□□□□□ -2.15
SH3RF3Q8TEJ3 RNA5SP220-201ENST00000516298 104 ntBASIC1.62□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-531P-201ENST00000516694 104 ntBASIC1.62□□□□□ -2.15
SH3RF3Q8TEJ3 SNORA25.16-201ENST00000516741 121 ntBASIC1.62□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-303P-201ENST00000517091 106 ntBASIC1.62□□□□□ -2.15
SH3RF3Q8TEJ3 MIR4491-201ENST00000581087 68 ntBASIC1.62□□□□□ -2.15
SH3RF3Q8TEJ3 SNORD92-201ENST00000585078 85 ntBASIC1.62□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-330P-201ENST00000363015 107 ntBASIC1.61□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-53P-201ENST00000365367 106 ntBASIC1.61□□□□□ -2.15
SH3RF3Q8TEJ3 RNA5SP259-201ENST00000365541 109 ntBASIC1.61□□□□□ -2.15
SH3RF3Q8TEJ3 MT-TN-201ENST00000387400 73 ntBASIC1.61□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-587P-201ENST00000391282 106 ntBASIC1.61□□□□□ -2.15
SH3RF3Q8TEJ3 MIR1185-1-201ENST00000408598 86 ntBASIC1.61□□□□□ -2.15
SH3RF3Q8TEJ3 MIR1276-201ENST00000408707 83 ntBASIC1.61□□□□□ -2.15
SH3RF3Q8TEJ3 SNORD63B-201ENST00000411005 70 ntBASIC1.61□□□□□ -2.15
SH3RF3Q8TEJ3 RNU1-123P-201ENST00000458950 160 ntBASIC1.61□□□□□ -2.15
SH3RF3Q8TEJ3 AC125388.1-201ENST00000459631 156 ntBASIC1.61□□□□□ -2.15
SH3RF3Q8TEJ3 RPL30P7-201ENST00000479312 323 ntBASIC1.61□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-871P-201ENST00000516122 100 ntBASIC1.61□□□□□ -2.15
SH3RF3Q8TEJ3 RNA5SP61-201ENST00000516453 100 ntBASIC1.61□□□□□ -2.15
SH3RF3Q8TEJ3 AL357312.1-201ENST00000603879 298 ntBASIC1.61□□□□□ -2.15
SH3RF3Q8TEJ3 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.61□□□□□ -2.15
SH3RF3Q8TEJ3 MIR8063-201ENST00000621930 81 ntBASIC1.61□□□□□ -2.15
SH3RF3Q8TEJ3 MIR6516-201ENST00000630554 81 ntBASIC1.61□□□□□ -2.15
SH3RF3Q8TEJ3 MIR1297-201ENST00000637311 77 ntBASIC1.61□□□□□ -2.15
SH3RF3Q8TEJ3 AL161722.3-201ENST00000605789 2983 ntBASIC1.61□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-208P-201ENST00000362431 107 ntBASIC1.6□□□□□ -2.15
SH3RF3Q8TEJ3 MT-TF-201ENST00000387314 71 ntBASIC1.6□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-380P-201ENST00000410207 107 ntBASIC1.6□□□□□ -2.15
SH3RF3Q8TEJ3 RNU7-62P-201ENST00000458856 62 ntBASIC1.6□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-1194P-201ENST00000516208 104 ntBASIC1.6□□□□□ -2.15
SH3RF3Q8TEJ3 AC015688.6-201ENST00000577737 104 ntBASIC1.6□□□□□ -2.15
SH3RF3Q8TEJ3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SH3RF3Q8TEJ3 Y_RNA.205-201ENST00000364128 113 ntBASIC1.59□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-654P-201ENST00000364373 107 ntBASIC1.59□□□□□ -2.15
SH3RF3Q8TEJ3 Y_RNA.264-201ENST00000364665 102 ntBASIC1.59□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-580P-201ENST00000365159 107 ntBASIC1.59□□□□□ -2.15
SH3RF3Q8TEJ3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SH3RF3Q8TEJ3 AL606490.4-201ENST00000423117 127 ntBASIC1.59□□□□□ -2.15
SH3RF3Q8TEJ3 AC079140.2-201ENST00000506193 142 ntBASIC1.59□□□□□ -2.15
SH3RF3Q8TEJ3 Y_RNA.681-201ENST00000516445 113 ntBASIC1.59□□□□□ -2.15
SH3RF3Q8TEJ3 RNU6-807P-201ENST00000516805 107 ntBASIC1.59□□□□□ -2.15
SH3RF3Q8TEJ3 Y_RNA.12-201ENST00000362393 112 ntBASIC1.58□□□□□ -2.16
SH3RF3Q8TEJ3 RNU6-649P-201ENST00000384463 107 ntBASIC1.58□□□□□ -2.16
SH3RF3Q8TEJ3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.58□□□□□ -2.16
SH3RF3Q8TEJ3 RNU6-1241P-201ENST00000384536 107 ntBASIC1.58□□□□□ -2.16
SH3RF3Q8TEJ3 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
SH3RF3Q8TEJ3 MIR548U-201ENST00000390728 81 ntBASIC1.58□□□□□ -2.16
SH3RF3Q8TEJ3 RNU6-466P-201ENST00000391224 103 ntBASIC1.58□□□□□ -2.16
SH3RF3Q8TEJ3 RNA5SP95-201ENST00000410319 137 ntBASIC1.58□□□□□ -2.16
SH3RF3Q8TEJ3 Y_RNA.596-201ENST00000410462 109 ntBASIC1.58□□□□□ -2.16
SH3RF3Q8TEJ3 AC015818.7-201ENST00000428754 109 ntBASIC1.58□□□□□ -2.16
SH3RF3Q8TEJ3 TRAJ51-201ENST00000504127 63 ntBASIC1.58□□□□□ -2.16
SH3RF3Q8TEJ3 RNU6-902P-201ENST00000517212 91 ntBASIC1.58□□□□□ -2.16
SH3RF3Q8TEJ3 MIR3660-201ENST00000584845 100 ntBASIC1.58□□□□□ -2.16
SH3RF3Q8TEJ3 U6.111-201ENST00000636093 83 ntBASIC1.58□□□□□ -2.16
SH3RF3Q8TEJ3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
SH3RF3Q8TEJ3 MIR377-201ENST00000362145 69 ntBASIC1.57□□□□□ -2.16
SH3RF3Q8TEJ3 Y_RNA.36-201ENST00000362602 112 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms