Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNU6-521P-201ENST00000516663 105 ntBASIC-0.03□□□□□ -2.41
C9orf40Q8IXQ3 MIR5706-201ENST00000579841 80 ntBASIC-0.03□□□□□ -2.41
C9orf40Q8IXQ3 MIR4768-201ENST00000585270 74 ntBASIC-0.03□□□□□ -2.41
C9orf40Q8IXQ3 SNORA70.25-201ENST00000612741 95 ntBASIC-0.03□□□□□ -2.41
C9orf40Q8IXQ3 AC073869.9-201ENST00000641610 120 ntBASIC-0.03□□□□□ -2.41
C9orf40Q8IXQ3 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
C9orf40Q8IXQ3 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.04□□□□□ -2.42
C9orf40Q8IXQ3 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.04□□□□□ -2.42
C9orf40Q8IXQ3 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.04□□□□□ -2.42
C9orf40Q8IXQ3 MIR1263-201ENST00000408324 86 ntBASIC-0.04□□□□□ -2.42
C9orf40Q8IXQ3 RNA5SP136-201ENST00000410906 107 ntBASIC-0.04□□□□□ -2.42
C9orf40Q8IXQ3 RNU6-782P-201ENST00000516852 104 ntBASIC-0.04□□□□□ -2.42
C9orf40Q8IXQ3 MIR5190-201ENST00000581537 80 ntBASIC-0.04□□□□□ -2.42
C9orf40Q8IXQ3 U7.6-201ENST00000610841 64 ntBASIC-0.04□□□□□ -2.42
C9orf40Q8IXQ3 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.05□□□□□ -2.42
C9orf40Q8IXQ3 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.05□□□□□ -2.42
C9orf40Q8IXQ3 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.05□□□□□ -2.42
C9orf40Q8IXQ3 MIR593-201ENST00000384856 100 ntBASIC-0.05□□□□□ -2.42
C9orf40Q8IXQ3 MIR501-201ENST00000390204 84 ntBASIC-0.05□□□□□ -2.42
C9orf40Q8IXQ3 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.06□□□□□ -2.42
C9orf40Q8IXQ3 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.06□□□□□ -2.42
C9orf40Q8IXQ3 RNU6-652P-201ENST00000365488 107 ntBASIC-0.06□□□□□ -2.42
C9orf40Q8IXQ3 SNORD38.2-201ENST00000384470 69 ntBASIC-0.06□□□□□ -2.42
C9orf40Q8IXQ3 MIR145-201ENST00000384967 88 ntBASIC-0.06□□□□□ -2.42
C9orf40Q8IXQ3 MIR892B-201ENST00000401279 77 ntBASIC-0.06□□□□□ -2.42
C9orf40Q8IXQ3 RNU6-850P-201ENST00000516934 103 ntBASIC-0.06□□□□□ -2.42
C9orf40Q8IXQ3 U7.2-201ENST00000607576 63 ntBASIC-0.06□□□□□ -2.42
C9orf40Q8IXQ3 FTX_2.1-201ENST00000618816 94 ntBASIC-0.06□□□□□ -2.42
C9orf40Q8IXQ3 MIR1255B1-201ENST00000636325 63 ntBASIC-0.06□□□□□ -2.42
C9orf40Q8IXQ3 MIR371B-201ENST00000638082 66 ntBASIC-0.06□□□□□ -2.42
C9orf40Q8IXQ3 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.07□□□□□ -2.42
C9orf40Q8IXQ3 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.07□□□□□ -2.42
C9orf40Q8IXQ3 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.07□□□□□ -2.42
C9orf40Q8IXQ3 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.07□□□□□ -2.42
C9orf40Q8IXQ3 RNU6-524P-201ENST00000384270 107 ntBASIC-0.07□□□□□ -2.42
C9orf40Q8IXQ3 RNU6-886P-201ENST00000384319 105 ntBASIC-0.07□□□□□ -2.42
C9orf40Q8IXQ3 MIR569-201ENST00000385228 96 ntBASIC-0.07□□□□□ -2.42
C9orf40Q8IXQ3 RNU7-106P-201ENST00000459514 67 ntBASIC-0.07□□□□□ -2.42
C9orf40Q8IXQ3 RNU7-13P-201ENST00000516413 62 ntBASIC-0.07□□□□□ -2.42
C9orf40Q8IXQ3 MIR4290-201ENST00000583807 95 ntBASIC-0.07□□□□□ -2.42
C9orf40Q8IXQ3 MIR4743-201ENST00000584576 69 ntBASIC-0.07□□□□□ -2.42
C9orf40Q8IXQ3 uc_338.28-201ENST00000612082 187 ntBASIC-0.07□□□□□ -2.42
C9orf40Q8IXQ3 RNU6-509P-201ENST00000363519 107 ntBASIC-0.08□□□□□ -2.42
C9orf40Q8IXQ3 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
C9orf40Q8IXQ3 MIR548H2-201ENST00000408874 88 ntBASIC-0.08□□□□□ -2.42
C9orf40Q8IXQ3 RNU6-735P-201ENST00000410612 107 ntBASIC-0.08□□□□□ -2.42
C9orf40Q8IXQ3 AL158147.1-201ENST00000443970 75 ntBASIC-0.08□□□□□ -2.42
C9orf40Q8IXQ3 AC141557.1-201ENST00000540982 400 ntBASIC-0.08□□□□□ -2.42
C9orf40Q8IXQ3 MTND5P40-201ENST00000559945 246 ntBASIC-0.08□□□□□ -2.42
C9orf40Q8IXQ3 MIR3920-201ENST00000581751 86 ntBASIC-0.08□□□□□ -2.42
C9orf40Q8IXQ3 MIR548AD-201ENST00000584780 82 ntBASIC-0.08□□□□□ -2.42
C9orf40Q8IXQ3 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.09□□□□□ -2.42
C9orf40Q8IXQ3 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.09□□□□□ -2.42
C9orf40Q8IXQ3 SNORD110-201ENST00000408189 75 ntBASIC-0.09□□□□□ -2.42
C9orf40Q8IXQ3 AC006210.1-201ENST00000424882 111 ntBASIC-0.09□□□□□ -2.42
C9orf40Q8IXQ3 AL109933.3-201ENST00000619095 188 ntBASIC-0.09□□□□□ -2.42
C9orf40Q8IXQ3 MIR516A2-201ENST00000384888 90 ntBASIC-0.1□□□□□ -2.43
C9orf40Q8IXQ3 MIR548D2-201ENST00000384955 97 ntBASIC-0.1□□□□□ -2.43
C9orf40Q8IXQ3 MIR516A1-201ENST00000385033 90 ntBASIC-0.1□□□□□ -2.43
C9orf40Q8IXQ3 SNORA7.5-201ENST00000410672 110 ntBASIC-0.1□□□□□ -2.43
C9orf40Q8IXQ3 RNU7-74P-201ENST00000459104 62 ntBASIC-0.1□□□□□ -2.43
C9orf40Q8IXQ3 RNU6-781P-201ENST00000516377 101 ntBASIC-0.1□□□□□ -2.43
C9orf40Q8IXQ3 MTND5P41-201ENST00000517498 206 ntBASIC-0.1□□□□□ -2.43
C9orf40Q8IXQ3 NAMPTP3-201ENST00000569273 224 ntBASIC-0.1□□□□□ -2.43
C9orf40Q8IXQ3 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.11□□□□□ -2.43
C9orf40Q8IXQ3 RNA5SP484-201ENST00000458857 111 ntBASIC-0.11□□□□□ -2.43
C9orf40Q8IXQ3 RNA5SP272-201ENST00000516095 111 ntBASIC-0.11□□□□□ -2.43
C9orf40Q8IXQ3 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.11□□□□□ -2.43
C9orf40Q8IXQ3 MIR4677-201ENST00000584153 80 ntBASIC-0.11□□□□□ -2.43
C9orf40Q8IXQ3 AL512310.12-203ENST00000640543 90 ntBASIC-0.11□□□□□ -2.43
C9orf40Q8IXQ3 RNA5SP457-201ENST00000363657 124 ntBASIC-0.12□□□□□ -2.43
C9orf40Q8IXQ3 AC090425.1-201ENST00000610007 140 ntBASIC-0.12□□□□□ -2.43
C9orf40Q8IXQ3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.12□□□□□ -2.43
C9orf40Q8IXQ3 RNU6-235P-201ENST00000362644 107 ntBASIC-0.13□□□□□ -2.43
C9orf40Q8IXQ3 RNU6-363P-201ENST00000362895 105 ntBASIC-0.13□□□□□ -2.43
C9orf40Q8IXQ3 RNU7-159P-201ENST00000459284 62 ntBASIC-0.13□□□□□ -2.43
C9orf40Q8IXQ3 RNU6-426P-201ENST00000516464 97 ntBASIC-0.13□□□□□ -2.43
C9orf40Q8IXQ3 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.14□□□□□ -2.43
C9orf40Q8IXQ3 RNU6-161P-201ENST00000363051 106 ntBASIC-0.14□□□□□ -2.43
C9orf40Q8IXQ3 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.14□□□□□ -2.43
C9orf40Q8IXQ3 RNY4P6-201ENST00000363667 96 ntBASIC-0.14□□□□□ -2.43
C9orf40Q8IXQ3 RNA5SP163-201ENST00000410304 99 ntBASIC-0.14□□□□□ -2.43
C9orf40Q8IXQ3 HMGN2P22-201ENST00000427588 175 ntBASIC-0.14□□□□□ -2.43
C9orf40Q8IXQ3 SPINT5P-201ENST00000448174 155 ntBASIC-0.14□□□□□ -2.43
C9orf40Q8IXQ3 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.14□□□□□ -2.43
C9orf40Q8IXQ3 MIR3925-201ENST00000584674 77 ntBASIC-0.14□□□□□ -2.43
C9orf40Q8IXQ3 AC025166.1-201ENST00000612411 163 ntBASIC-0.14□□□□□ -2.43
C9orf40Q8IXQ3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.15□□□□□ -2.43
C9orf40Q8IXQ3 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.15□□□□□ -2.43
C9orf40Q8IXQ3 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.15□□□□□ -2.43
C9orf40Q8IXQ3 SNORD115-44-201ENST00000365391 82 ntBASIC-0.15□□□□□ -2.43
C9orf40Q8IXQ3 RNU6-409P-201ENST00000384114 104 ntBASIC-0.15□□□□□ -2.43
C9orf40Q8IXQ3 RNU6-929P-201ENST00000384429 107 ntBASIC-0.15□□□□□ -2.43
C9orf40Q8IXQ3 SNORA75.1-201ENST00000391130 148 ntBASIC-0.15□□□□□ -2.43
C9orf40Q8IXQ3 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.15□□□□□ -2.43
C9orf40Q8IXQ3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.15□□□□□ -2.43
C9orf40Q8IXQ3 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.15□□□□□ -2.43
C9orf40Q8IXQ3 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.15□□□□□ -2.43
C9orf40Q8IXQ3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.15□□□□□ -2.43
C9orf40Q8IXQ3 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 327.9 ms