Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RNU1-92P-201ENST00000517017 135 ntBASIC1.32□□□□□ -2.2
VRK3Q8IV63 MIR4422-201ENST00000581938 83 ntBASIC1.32□□□□□ -2.2
VRK3Q8IV63 MIR4536-1-201ENST00000583537 88 ntBASIC1.32□□□□□ -2.2
VRK3Q8IV63 AC013244.2-201ENST00000603396 103 ntBASIC1.32□□□□□ -2.2
VRK3Q8IV63 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
VRK3Q8IV63 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
VRK3Q8IV63 RNU4-32P-201ENST00000363404 141 ntBASIC1.31□□□□□ -2.2
VRK3Q8IV63 RNU6-129P-201ENST00000391022 107 ntBASIC1.31□□□□□ -2.2
VRK3Q8IV63 SNORA75.2-201ENST00000391138 150 ntBASIC1.31□□□□□ -2.2
VRK3Q8IV63 SNORA75.3-201ENST00000391231 150 ntBASIC1.31□□□□□ -2.2
VRK3Q8IV63 RNU1-123P-201ENST00000458950 160 ntBASIC1.31□□□□□ -2.2
VRK3Q8IV63 AC004223.1-201ENST00000479840 271 ntBASIC1.31□□□□□ -2.2
VRK3Q8IV63 RNU6-902P-201ENST00000517212 91 ntBASIC1.31□□□□□ -2.2
VRK3Q8IV63 MIR4421-201ENST00000578133 69 ntBASIC1.31□□□□□ -2.2
VRK3Q8IV63 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
VRK3Q8IV63 AC023934.1-201ENST00000574529 2389 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 MIR337-201ENST00000362281 93 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 Y_RNA.13-201ENST00000362403 112 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 RNU6-403P-201ENST00000363163 104 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 RNU6-478P-201ENST00000363904 110 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 RNU6-776P-201ENST00000364403 104 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 RNU6-1022P-201ENST00000365049 104 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 RNU6-934P-201ENST00000365154 107 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 Y_RNA.536-201ENST00000384621 113 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 MIR125B2-201ENST00000385128 89 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 SNORD111-201ENST00000408139 94 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 MIR1257-201ENST00000408490 117 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 RNU6-321P-201ENST00000410912 106 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 TRAJ51-201ENST00000504127 63 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 SNORA31.2-201ENST00000516019 134 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 RNU6-65P-201ENST00000516332 98 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 AC068338.1-201ENST00000565567 176 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 MIR548H5-201ENST00000580314 60 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 MIR3064-201ENST00000581130 66 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 AC106800.4-201ENST00000614905 153 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 MIR7974-201ENST00000615835 79 ntBASIC1.3□□□□□ -2.2
VRK3Q8IV63 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
VRK3Q8IV63 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
VRK3Q8IV63 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
VRK3Q8IV63 Y_RNA.42-201ENST00000362660 108 ntBASIC1.29□□□□□ -2.2
VRK3Q8IV63 RNU6-1260P-201ENST00000362944 107 ntBASIC1.29□□□□□ -2.2
VRK3Q8IV63 RNU6-811P-201ENST00000384069 107 ntBASIC1.29□□□□□ -2.2
VRK3Q8IV63 MIR635-201ENST00000384830 98 ntBASIC1.29□□□□□ -2.2
VRK3Q8IV63 MIR1287-201ENST00000408492 90 ntBASIC1.29□□□□□ -2.2
VRK3Q8IV63 SNORD83.1-201ENST00000411362 77 ntBASIC1.29□□□□□ -2.2
VRK3Q8IV63 RNU7-21P-201ENST00000459430 62 ntBASIC1.29□□□□□ -2.2
VRK3Q8IV63 TRMT112P2-201ENST00000512910 132 ntBASIC1.29□□□□□ -2.2
VRK3Q8IV63 RN7SKP88-201ENST00000516847 250 ntBASIC1.29□□□□□ -2.2
VRK3Q8IV63 SNORD92-201ENST00000585078 85 ntBASIC1.29□□□□□ -2.2
VRK3Q8IV63 RNU7-10P-201ENST00000607194 63 ntBASIC1.29□□□□□ -2.2
VRK3Q8IV63 7SK.8-201ENST00000612110 250 ntBASIC1.29□□□□□ -2.2
VRK3Q8IV63 7SK.11-201ENST00000615477 250 ntBASIC1.29□□□□□ -2.2
VRK3Q8IV63 7SK.13-201ENST00000622040 250 ntBASIC1.29□□□□□ -2.2
VRK3Q8IV63 SNORA63.2-201ENST00000362603 126 ntBASIC1.28□□□□□ -2.2
VRK3Q8IV63 RNU6-132P-201ENST00000383863 107 ntBASIC1.28□□□□□ -2.2
VRK3Q8IV63 RNA5SP292-201ENST00000390974 118 ntBASIC1.28□□□□□ -2.2
VRK3Q8IV63 AC092628.1-201ENST00000436250 252 ntBASIC1.28□□□□□ -2.2
VRK3Q8IV63 AL450471.1-201ENST00000447509 127 ntBASIC1.28□□□□□ -2.2
VRK3Q8IV63 SNORA18.5-201ENST00000516616 101 ntBASIC1.28□□□□□ -2.2
VRK3Q8IV63 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.28□□□□□ -2.2
VRK3Q8IV63 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
VRK3Q8IV63 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
VRK3Q8IV63 MIRLET7A1-201ENST00000362295 80 ntBASIC1.27□□□□□ -2.21
VRK3Q8IV63 RNU6-369P-201ENST00000362515 102 ntBASIC1.27□□□□□ -2.21
VRK3Q8IV63 RNU6-957P-201ENST00000363652 99 ntBASIC1.27□□□□□ -2.21
VRK3Q8IV63 SNORA7.1-201ENST00000363750 139 ntBASIC1.27□□□□□ -2.21
VRK3Q8IV63 Y_RNA.330-201ENST00000365230 109 ntBASIC1.27□□□□□ -2.21
VRK3Q8IV63 MIR518E-201ENST00000385252 88 ntBASIC1.27□□□□□ -2.21
VRK3Q8IV63 MIR758-201ENST00000390227 88 ntBASIC1.27□□□□□ -2.21
VRK3Q8IV63 RNU6-466P-201ENST00000391224 103 ntBASIC1.27□□□□□ -2.21
VRK3Q8IV63 RPS26P5-201ENST00000418544 335 ntBASIC1.27□□□□□ -2.21
VRK3Q8IV63 MIR4796-201ENST00000580742 81 ntBASIC1.27□□□□□ -2.21
VRK3Q8IV63 AC104996.3-201ENST00000590718 94 ntBASIC1.27□□□□□ -2.21
VRK3Q8IV63 AL359821.1-201ENST00000605519 182 ntBASIC1.27□□□□□ -2.21
VRK3Q8IV63 AL161722.3-201ENST00000605789 2983 ntBASIC1.26□□□□□ -2.21
VRK3Q8IV63 MIR101-2-201ENST00000362195 79 ntBASIC1.26□□□□□ -2.21
VRK3Q8IV63 RNU6-1229P-201ENST00000364295 107 ntBASIC1.26□□□□□ -2.21
VRK3Q8IV63 AL591704.2-201ENST00000421658 181 ntBASIC1.26□□□□□ -2.21
VRK3Q8IV63 RNU7-195P-201ENST00000458793 62 ntBASIC1.26□□□□□ -2.21
VRK3Q8IV63 SNORD79.1-201ENST00000516069 84 ntBASIC1.26□□□□□ -2.21
VRK3Q8IV63 MIR4676-201ENST00000583078 72 ntBASIC1.26□□□□□ -2.21
VRK3Q8IV63 MIR3660-201ENST00000584845 100 ntBASIC1.26□□□□□ -2.21
VRK3Q8IV63 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.25□□□□□ -2.21
VRK3Q8IV63 RNU6-686P-201ENST00000364839 107 ntBASIC1.25□□□□□ -2.21
VRK3Q8IV63 SNORA80D-201ENST00000384488 135 ntBASIC1.25□□□□□ -2.21
VRK3Q8IV63 MIR520H-201ENST00000385126 88 ntBASIC1.25□□□□□ -2.21
VRK3Q8IV63 MIR548U-201ENST00000390728 81 ntBASIC1.25□□□□□ -2.21
VRK3Q8IV63 SNORA40.6-201ENST00000391153 128 ntBASIC1.25□□□□□ -2.21
VRK3Q8IV63 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.25□□□□□ -2.21
VRK3Q8IV63 Y_RNA.660-201ENST00000516002 120 ntBASIC1.25□□□□□ -2.21
VRK3Q8IV63 RNU6-448P-201ENST00000517052 107 ntBASIC1.25□□□□□ -2.21
VRK3Q8IV63 MIR4771-2-201ENST00000577758 74 ntBASIC1.25□□□□□ -2.21
VRK3Q8IV63 MIR4771-1-201ENST00000582617 74 ntBASIC1.25□□□□□ -2.21
VRK3Q8IV63 MTRNR2L2-201ENST00000604882 87 ntBASIC1.25□□□□□ -2.21
VRK3Q8IV63 AC145423.2-201ENST00000610631 239 ntBASIC1.25□□□□□ -2.21
VRK3Q8IV63 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.25□□□□□ -2.21
VRK3Q8IV63 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.25□□□□□ -2.21
VRK3Q8IV63 RNU6-1094P-201ENST00000362416 104 ntBASIC1.24□□□□□ -2.21
VRK3Q8IV63 Y_RNA.491-201ENST00000384417 107 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 267.2 ms