Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.56□□□□□ -2.32
ZC3HC1Q86WB0 RNA5SP121-201ENST00000516537 101 ntBASIC0.56□□□□□ -2.32
ZC3HC1Q86WB0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
ZC3HC1Q86WB0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
ZC3HC1Q86WB0 RNA5SP517-201ENST00000364724 117 ntBASIC0.55□□□□□ -2.32
ZC3HC1Q86WB0 MIR520E-201ENST00000384867 87 ntBASIC0.55□□□□□ -2.32
ZC3HC1Q86WB0 MIR1276-201ENST00000408707 83 ntBASIC0.55□□□□□ -2.32
ZC3HC1Q86WB0 Y_RNA.709-201ENST00000516952 92 ntBASIC0.55□□□□□ -2.32
ZC3HC1Q86WB0 RNA5SP47-201ENST00000517230 109 ntBASIC0.55□□□□□ -2.32
ZC3HC1Q86WB0 AC141557.1-201ENST00000540982 400 ntBASIC0.55□□□□□ -2.32
ZC3HC1Q86WB0 AC018659.1-201ENST00000551083 169 ntBASIC0.55□□□□□ -2.32
ZC3HC1Q86WB0 MIR4639-201ENST00000584938 69 ntBASIC0.55□□□□□ -2.32
ZC3HC1Q86WB0 AC096720.1-201ENST00000604441 183 ntBASIC0.55□□□□□ -2.32
ZC3HC1Q86WB0 AC244669.1-204ENST00000621564 178 ntBASIC0.55□□□□□ -2.32
ZC3HC1Q86WB0 SNORD115-24-201ENST00000363528 82 ntBASIC0.54□□□□□ -2.32
ZC3HC1Q86WB0 RNU6-1163P-201ENST00000364516 107 ntBASIC0.54□□□□□ -2.32
ZC3HC1Q86WB0 RNU6-1325P-201ENST00000364905 105 ntBASIC0.54□□□□□ -2.32
ZC3HC1Q86WB0 RNU6-945P-201ENST00000383947 107 ntBASIC0.54□□□□□ -2.32
ZC3HC1Q86WB0 MIR516A2-201ENST00000384888 90 ntBASIC0.54□□□□□ -2.32
ZC3HC1Q86WB0 MIR516A1-201ENST00000385033 90 ntBASIC0.54□□□□□ -2.32
ZC3HC1Q86WB0 AC097635.1-201ENST00000450678 155 ntBASIC0.54□□□□□ -2.32
ZC3HC1Q86WB0 RNU7-195P-201ENST00000458793 62 ntBASIC0.54□□□□□ -2.32
ZC3HC1Q86WB0 RNU4-54P-201ENST00000516428 129 ntBASIC0.54□□□□□ -2.32
ZC3HC1Q86WB0 MIR548AI-201ENST00000579940 88 ntBASIC0.54□□□□□ -2.32
ZC3HC1Q86WB0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
ZC3HC1Q86WB0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.53□□□□□ -2.32
ZC3HC1Q86WB0 MIR599-201ENST00000385069 95 ntBASIC0.53□□□□□ -2.32
ZC3HC1Q86WB0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
ZC3HC1Q86WB0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.53□□□□□ -2.32
ZC3HC1Q86WB0 SCARNA16.5-201ENST00000517114 183 ntBASIC0.53□□□□□ -2.32
ZC3HC1Q86WB0 AC092634.7-201ENST00000621022 103 ntBASIC0.53□□□□□ -2.32
ZC3HC1Q86WB0 MIR6828-201ENST00000636181 60 ntBASIC0.53□□□□□ -2.32
ZC3HC1Q86WB0 Y_RNA.163-201ENST00000363702 113 ntBASIC0.52□□□□□ -2.33
ZC3HC1Q86WB0 RNU6-1229P-201ENST00000364295 107 ntBASIC0.52□□□□□ -2.33
ZC3HC1Q86WB0 SNORD114-22-201ENST00000365423 72 ntBASIC0.52□□□□□ -2.33
ZC3HC1Q86WB0 SNORA8.2-201ENST00000384372 139 ntBASIC0.52□□□□□ -2.33
ZC3HC1Q86WB0 RNU6-106P-201ENST00000384405 107 ntBASIC0.52□□□□□ -2.33
ZC3HC1Q86WB0 RNU6-554P-201ENST00000410466 106 ntBASIC0.52□□□□□ -2.33
ZC3HC1Q86WB0 SNORA19.1-201ENST00000410656 129 ntBASIC0.52□□□□□ -2.33
ZC3HC1Q86WB0 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
ZC3HC1Q86WB0 Y_RNA.659-201ENST00000515994 113 ntBASIC0.52□□□□□ -2.33
ZC3HC1Q86WB0 Y_RNA.809-201ENST00000516058 95 ntBASIC0.52□□□□□ -2.33
ZC3HC1Q86WB0 RNU7-161P-201ENST00000517289 62 ntBASIC0.52□□□□□ -2.33
ZC3HC1Q86WB0 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.52□□□□□ -2.33
ZC3HC1Q86WB0 AC091304.10-201ENST00000641554 121 ntBASIC0.52□□□□□ -2.33
ZC3HC1Q86WB0 RNU6-1260P-201ENST00000362944 107 ntBASIC0.51□□□□□ -2.33
ZC3HC1Q86WB0 Y_RNA.78-201ENST00000362970 110 ntBASIC0.51□□□□□ -2.33
ZC3HC1Q86WB0 RNA5SP403-201ENST00000363598 108 ntBASIC0.51□□□□□ -2.33
ZC3HC1Q86WB0 RNA5SP499-201ENST00000363982 119 ntBASIC0.51□□□□□ -2.33
ZC3HC1Q86WB0 Y_RNA.221-201ENST00000364248 96 ntBASIC0.51□□□□□ -2.33
ZC3HC1Q86WB0 RNY4P18-201ENST00000391107 89 ntBASIC0.51□□□□□ -2.33
ZC3HC1Q86WB0 AC109327.2-201ENST00000448339 378 ntBASIC0.51□□□□□ -2.33
ZC3HC1Q86WB0 RNU6-904P-201ENST00000516206 101 ntBASIC0.51□□□□□ -2.33
ZC3HC1Q86WB0 RN7SKP12-201ENST00000516275 143 ntBASIC0.51□□□□□ -2.33
ZC3HC1Q86WB0 RNA5SP268-201ENST00000516828 124 ntBASIC0.51□□□□□ -2.33
ZC3HC1Q86WB0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.51□□□□□ -2.33
ZC3HC1Q86WB0 MIR4714-201ENST00000580728 77 ntBASIC0.51□□□□□ -2.33
ZC3HC1Q86WB0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
ZC3HC1Q86WB0 Y_RNA.57-201ENST00000362806 113 ntBASIC0.5□□□□□ -2.33
ZC3HC1Q86WB0 SNORD36A-201ENST00000362874 73 ntBASIC0.5□□□□□ -2.33
ZC3HC1Q86WB0 RNU4-36P-201ENST00000364294 144 ntBASIC0.5□□□□□ -2.33
ZC3HC1Q86WB0 Y_RNA.601-201ENST00000410500 113 ntBASIC0.5□□□□□ -2.33
ZC3HC1Q86WB0 RNU6-86P-201ENST00000606534 107 ntBASIC0.5□□□□□ -2.33
ZC3HC1Q86WB0 SNORD118-201ENST00000363593 134 ntBASIC0.49□□□□□ -2.33
ZC3HC1Q86WB0 RNU6-1244P-201ENST00000363614 108 ntBASIC0.49□□□□□ -2.33
ZC3HC1Q86WB0 SNORD45B-201ENST00000364617 72 ntBASIC0.49□□□□□ -2.33
ZC3HC1Q86WB0 RNU6-215P-201ENST00000365169 102 ntBASIC0.49□□□□□ -2.33
ZC3HC1Q86WB0 SNORD20-201ENST00000384550 80 ntBASIC0.49□□□□□ -2.33
ZC3HC1Q86WB0 RNU6-1254P-201ENST00000391266 104 ntBASIC0.49□□□□□ -2.33
ZC3HC1Q86WB0 MIR1302-5-201ENST00000408164 150 ntBASIC0.49□□□□□ -2.33
ZC3HC1Q86WB0 SNORA40.8-201ENST00000411034 126 ntBASIC0.49□□□□□ -2.33
ZC3HC1Q86WB0 RPS29P1-201ENST00000465274 159 ntBASIC0.49□□□□□ -2.33
ZC3HC1Q86WB0 SNORA25.18-201ENST00000607153 114 ntBASIC0.49□□□□□ -2.33
ZC3HC1Q86WB0 uc_338.28-201ENST00000612082 187 ntBASIC0.49□□□□□ -2.33
ZC3HC1Q86WB0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
ZC3HC1Q86WB0 Y_RNA.10-201ENST00000362371 110 ntBASIC0.48□□□□□ -2.33
ZC3HC1Q86WB0 Y_RNA.95-201ENST00000363079 95 ntBASIC0.48□□□□□ -2.33
ZC3HC1Q86WB0 RNU6-524P-201ENST00000384270 107 ntBASIC0.48□□□□□ -2.33
ZC3HC1Q86WB0 MIR518A1-201ENST00000385068 85 ntBASIC0.48□□□□□ -2.33
ZC3HC1Q86WB0 RNU6-537P-201ENST00000517277 103 ntBASIC0.48□□□□□ -2.33
ZC3HC1Q86WB0 MIR7107-201ENST00000611489 80 ntBASIC0.48□□□□□ -2.33
ZC3HC1Q86WB0 MIR181B2-201ENST00000385004 89 ntBASIC0.47□□□□□ -2.33
ZC3HC1Q86WB0 RNU7-104P-201ENST00000459398 79 ntBASIC0.47□□□□□ -2.33
ZC3HC1Q86WB0 RNA5SP227-201ENST00000516184 113 ntBASIC0.47□□□□□ -2.33
ZC3HC1Q86WB0 RNU6-795P-201ENST00000516323 103 ntBASIC0.47□□□□□ -2.33
ZC3HC1Q86WB0 MIR4777-201ENST00000583710 86 ntBASIC0.47□□□□□ -2.33
ZC3HC1Q86WB0 MIR4439-201ENST00000583746 80 ntBASIC0.47□□□□□ -2.33
ZC3HC1Q86WB0 MIR548Z-201ENST00000584743 97 ntBASIC0.47□□□□□ -2.33
ZC3HC1Q86WB0 MIR6504-201ENST00000613520 61 ntBASIC0.47□□□□□ -2.33
ZC3HC1Q86WB0 AC012531.4-201ENST00000616509 177 ntBASIC0.47□□□□□ -2.33
ZC3HC1Q86WB0 RNU6-1125P-201ENST00000363601 107 ntBASIC0.46□□□□□ -2.34
ZC3HC1Q86WB0 RNU6-726P-201ENST00000364680 107 ntBASIC0.46□□□□□ -2.34
ZC3HC1Q86WB0 Y_RNA.467-201ENST00000384297 102 ntBASIC0.46□□□□□ -2.34
ZC3HC1Q86WB0 RNU6-480P-201ENST00000384332 107 ntBASIC0.46□□□□□ -2.34
ZC3HC1Q86WB0 MIR590-201ENST00000385008 97 ntBASIC0.46□□□□□ -2.34
ZC3HC1Q86WB0 RNU6-243P-201ENST00000391140 107 ntBASIC0.46□□□□□ -2.34
ZC3HC1Q86WB0 AC098934.3-201ENST00000430450 190 ntBASIC0.46□□□□□ -2.34
ZC3HC1Q86WB0 SCARNA23-201ENST00000516060 130 ntBASIC0.46□□□□□ -2.34
ZC3HC1Q86WB0 MIR8070-201ENST00000616510 88 ntBASIC0.46□□□□□ -2.34
ZC3HC1Q86WB0 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms