Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 RNU6-957P-201ENST00000363652 99 ntBASIC1.52□□□□□ -2.17
LIMS2Q7Z4I7 RNU6-53P-201ENST00000365367 106 ntBASIC1.52□□□□□ -2.17
LIMS2Q7Z4I7 Y_RNA.532-201ENST00000384590 113 ntBASIC1.52□□□□□ -2.17
LIMS2Q7Z4I7 MIR518E-201ENST00000385252 88 ntBASIC1.52□□□□□ -2.17
LIMS2Q7Z4I7 TRAJ51-201ENST00000504127 63 ntBASIC1.52□□□□□ -2.17
LIMS2Q7Z4I7 MIR4498-201ENST00000577599 66 ntBASIC1.52□□□□□ -2.17
LIMS2Q7Z4I7 MIR3664-201ENST00000579074 99 ntBASIC1.52□□□□□ -2.17
LIMS2Q7Z4I7 Y_RNA.491-201ENST00000384417 107 ntBASIC1.51□□□□□ -2.17
LIMS2Q7Z4I7 RNU6-466P-201ENST00000391224 103 ntBASIC1.51□□□□□ -2.17
LIMS2Q7Z4I7 MIR934-201ENST00000401241 83 ntBASIC1.51□□□□□ -2.17
LIMS2Q7Z4I7 RNU6-1054P-201ENST00000411293 104 ntBASIC1.51□□□□□ -2.17
LIMS2Q7Z4I7 snoU13.9-201ENST00000458927 103 ntBASIC1.51□□□□□ -2.17
LIMS2Q7Z4I7 RNU7-185P-201ENST00000459215 60 ntBASIC1.51□□□□□ -2.17
LIMS2Q7Z4I7 AC008834.1-201ENST00000511612 175 ntBASIC1.51□□□□□ -2.17
LIMS2Q7Z4I7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.51□□□□□ -2.17
LIMS2Q7Z4I7 MIR3134-201ENST00000579433 74 ntBASIC1.51□□□□□ -2.17
LIMS2Q7Z4I7 AC013244.2-201ENST00000603396 103 ntBASIC1.51□□□□□ -2.17
LIMS2Q7Z4I7 MIR8063-201ENST00000621930 81 ntBASIC1.51□□□□□ -2.17
LIMS2Q7Z4I7 ZNF209P-201ENST00000593450 2304 ntBASIC1.5□□□□□ -2.17
LIMS2Q7Z4I7 SNORA25.9-201ENST00000365087 128 ntBASIC1.5□□□□□ -2.17
LIMS2Q7Z4I7 Y_RNA.536-201ENST00000384621 113 ntBASIC1.5□□□□□ -2.17
LIMS2Q7Z4I7 MIR548U-201ENST00000390728 81 ntBASIC1.5□□□□□ -2.17
LIMS2Q7Z4I7 RNU6-1108P-201ENST00000516308 104 ntBASIC1.5□□□□□ -2.17
LIMS2Q7Z4I7 snoU13.31-201ENST00000607291 104 ntBASIC1.5□□□□□ -2.17
LIMS2Q7Z4I7 MIR6082-201ENST00000613604 109 ntBASIC1.5□□□□□ -2.17
LIMS2Q7Z4I7 MIRLET7F1-201ENST00000362202 87 ntBASIC1.49□□□□□ -2.17
LIMS2Q7Z4I7 SNORD33-201ENST00000362761 85 ntBASIC1.49□□□□□ -2.17
LIMS2Q7Z4I7 Y_RNA.56-201ENST00000362798 112 ntBASIC1.49□□□□□ -2.17
LIMS2Q7Z4I7 RNU6-1260P-201ENST00000362944 107 ntBASIC1.49□□□□□ -2.17
LIMS2Q7Z4I7 Y_RNA.264-201ENST00000364665 102 ntBASIC1.49□□□□□ -2.17
LIMS2Q7Z4I7 MIR635-201ENST00000384830 98 ntBASIC1.49□□□□□ -2.17
LIMS2Q7Z4I7 MIR30A-201ENST00000385092 71 ntBASIC1.49□□□□□ -2.17
LIMS2Q7Z4I7 SNORD77.2-201ENST00000391045 68 ntBASIC1.49□□□□□ -2.17
LIMS2Q7Z4I7 SNORD90-201ENST00000391145 111 ntBASIC1.49□□□□□ -2.17
LIMS2Q7Z4I7 RNU6-380P-201ENST00000410207 107 ntBASIC1.49□□□□□ -2.17
LIMS2Q7Z4I7 RNU7-195P-201ENST00000458793 62 ntBASIC1.49□□□□□ -2.17
LIMS2Q7Z4I7 snoU13.21-201ENST00000459368 105 ntBASIC1.49□□□□□ -2.17
LIMS2Q7Z4I7 AC079140.2-201ENST00000506193 142 ntBASIC1.49□□□□□ -2.17
LIMS2Q7Z4I7 MIR4421-201ENST00000578133 69 ntBASIC1.49□□□□□ -2.17
LIMS2Q7Z4I7 MIR548H5-201ENST00000580314 60 ntBASIC1.49□□□□□ -2.17
LIMS2Q7Z4I7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.49□□□□□ -2.17
LIMS2Q7Z4I7 RNU6-403P-201ENST00000363163 104 ntBASIC1.48□□□□□ -2.17
LIMS2Q7Z4I7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.48□□□□□ -2.17
LIMS2Q7Z4I7 AC092628.1-201ENST00000436250 252 ntBASIC1.48□□□□□ -2.17
LIMS2Q7Z4I7 AC114801.3-201ENST00000510231 177 ntBASIC1.48□□□□□ -2.17
LIMS2Q7Z4I7 RNU6-765P-201ENST00000516916 99 ntBASIC1.48□□□□□ -2.17
LIMS2Q7Z4I7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.48□□□□□ -2.17
LIMS2Q7Z4I7 AC036111.3-201ENST00000526389 112 ntBASIC1.48□□□□□ -2.17
LIMS2Q7Z4I7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.48□□□□□ -2.17
LIMS2Q7Z4I7 RNU7-10P-201ENST00000607194 63 ntBASIC1.48□□□□□ -2.17
LIMS2Q7Z4I7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.48□□□□□ -2.17
LIMS2Q7Z4I7 AC023934.1-201ENST00000574529 2389 ntBASIC1.47□□□□□ -2.17
LIMS2Q7Z4I7 Y_RNA.13-201ENST00000362403 112 ntBASIC1.47□□□□□ -2.17
LIMS2Q7Z4I7 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
LIMS2Q7Z4I7 AC074348.1-201ENST00000426503 132 ntBASIC1.47□□□□□ -2.17
LIMS2Q7Z4I7 AL512310.8-201ENST00000550183 120 ntBASIC1.47□□□□□ -2.17
LIMS2Q7Z4I7 MTRNR2L2-201ENST00000604882 87 ntBASIC1.47□□□□□ -2.17
LIMS2Q7Z4I7 MIR1297-201ENST00000637311 77 ntBASIC1.47□□□□□ -2.17
LIMS2Q7Z4I7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.47□□□□□ -2.17
LIMS2Q7Z4I7 MIR101-2-201ENST00000362195 79 ntBASIC1.46□□□□□ -2.18
LIMS2Q7Z4I7 Y_RNA.42-201ENST00000362660 108 ntBASIC1.46□□□□□ -2.18
LIMS2Q7Z4I7 SNORD113.3-201ENST00000364630 78 ntBASIC1.46□□□□□ -2.18
LIMS2Q7Z4I7 AL606490.4-201ENST00000423117 127 ntBASIC1.46□□□□□ -2.18
LIMS2Q7Z4I7 RNA5SP61-201ENST00000516453 100 ntBASIC1.46□□□□□ -2.18
LIMS2Q7Z4I7 AC019176.1-201ENST00000518519 225 ntBASIC1.46□□□□□ -2.18
LIMS2Q7Z4I7 MIR3660-201ENST00000584845 100 ntBASIC1.46□□□□□ -2.18
LIMS2Q7Z4I7 RNU6-208P-201ENST00000362431 107 ntBASIC1.45□□□□□ -2.18
LIMS2Q7Z4I7 RNU6-411P-201ENST00000384451 107 ntBASIC1.45□□□□□ -2.18
LIMS2Q7Z4I7 RNU6-1065P-201ENST00000384513 106 ntBASIC1.45□□□□□ -2.18
LIMS2Q7Z4I7 MIR150-201ENST00000385048 84 ntBASIC1.45□□□□□ -2.18
LIMS2Q7Z4I7 MIR125B2-201ENST00000385128 89 ntBASIC1.45□□□□□ -2.18
LIMS2Q7Z4I7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
LIMS2Q7Z4I7 MIR1257-201ENST00000408490 117 ntBASIC1.45□□□□□ -2.18
LIMS2Q7Z4I7 AC015818.7-201ENST00000428754 109 ntBASIC1.45□□□□□ -2.18
LIMS2Q7Z4I7 snoU13.17-201ENST00000458802 104 ntBASIC1.45□□□□□ -2.18
LIMS2Q7Z4I7 Y_RNA.809-201ENST00000516058 95 ntBASIC1.45□□□□□ -2.18
LIMS2Q7Z4I7 SNORA44.1-201ENST00000517031 108 ntBASIC1.45□□□□□ -2.18
LIMS2Q7Z4I7 RNU6-303P-201ENST00000517091 106 ntBASIC1.45□□□□□ -2.18
LIMS2Q7Z4I7 TRDV1-202ENST00000621643 102 ntBASIC1.45□□□□□ -2.18
LIMS2Q7Z4I7 SNORA7.1-201ENST00000363750 139 ntBASIC1.44□□□□□ -2.18
LIMS2Q7Z4I7 RNU6-934P-201ENST00000365154 107 ntBASIC1.44□□□□□ -2.18
LIMS2Q7Z4I7 Y_RNA.363-201ENST00000365529 113 ntBASIC1.44□□□□□ -2.18
LIMS2Q7Z4I7 SNORD83.1-201ENST00000411362 77 ntBASIC1.44□□□□□ -2.18
LIMS2Q7Z4I7 Y_RNA.676-201ENST00000516393 96 ntBASIC1.44□□□□□ -2.18
LIMS2Q7Z4I7 RNU6-807P-201ENST00000516805 107 ntBASIC1.44□□□□□ -2.18
LIMS2Q7Z4I7 RNU6-448P-201ENST00000517052 107 ntBASIC1.44□□□□□ -2.18
LIMS2Q7Z4I7 MIR3198-2-201ENST00000577868 80 ntBASIC1.44□□□□□ -2.18
LIMS2Q7Z4I7 RNU6-590P-201ENST00000365039 107 ntBASIC1.43□□□□□ -2.18
LIMS2Q7Z4I7 SNORA75.2-201ENST00000391138 150 ntBASIC1.43□□□□□ -2.18
LIMS2Q7Z4I7 SNORA75.3-201ENST00000391231 150 ntBASIC1.43□□□□□ -2.18
LIMS2Q7Z4I7 AC097635.1-201ENST00000450678 155 ntBASIC1.43□□□□□ -2.18
LIMS2Q7Z4I7 RNU1-123P-201ENST00000458950 160 ntBASIC1.43□□□□□ -2.18
LIMS2Q7Z4I7 AC048334.1-201ENST00000477975 159 ntBASIC1.43□□□□□ -2.18
LIMS2Q7Z4I7 RNU6-687P-201ENST00000516443 89 ntBASIC1.43□□□□□ -2.18
LIMS2Q7Z4I7 RNU6-1015P-201ENST00000517121 99 ntBASIC1.43□□□□□ -2.18
LIMS2Q7Z4I7 MIR3937-201ENST00000580135 106 ntBASIC1.43□□□□□ -2.18
LIMS2Q7Z4I7 MIR4696-201ENST00000581431 70 ntBASIC1.43□□□□□ -2.18
LIMS2Q7Z4I7 RNU6-664P-201ENST00000362381 107 ntBASIC1.42□□□□□ -2.18
LIMS2Q7Z4I7 RNU6-1051P-201ENST00000365471 102 ntBASIC1.42□□□□□ -2.18
LIMS2Q7Z4I7 MIR758-201ENST00000390227 88 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms