Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
USP31Q70CQ4 RNU6-997P-201ENST00000384725 107 ntBASIC1.54□□□□□ -2.16
USP31Q70CQ4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.54□□□□□ -2.16
USP31Q70CQ4 MIR548J-201ENST00000408833 112 ntBASIC1.54□□□□□ -2.16
USP31Q70CQ4 RNU6-765P-201ENST00000516916 99 ntBASIC1.54□□□□□ -2.16
USP31Q70CQ4 RNU6-850P-201ENST00000516934 103 ntBASIC1.54□□□□□ -2.16
USP31Q70CQ4 MIR4804-201ENST00000581683 73 ntBASIC1.54□□□□□ -2.16
USP31Q70CQ4 SNORD92-201ENST00000585078 85 ntBASIC1.54□□□□□ -2.16
USP31Q70CQ4 AC006254.2-201ENST00000603259 279 ntBASIC1.54□□□□□ -2.16
USP31Q70CQ4 RNU7-10P-201ENST00000607194 63 ntBASIC1.54□□□□□ -2.16
USP31Q70CQ4 AC103810.7-201ENST00000607821 91 ntBASIC1.54□□□□□ -2.16
USP31Q70CQ4 RNU6-1131P-201ENST00000364955 107 ntBASIC1.53□□□□□ -2.16
USP31Q70CQ4 Y_RNA.342-201ENST00000365352 113 ntBASIC1.53□□□□□ -2.16
USP31Q70CQ4 Y_RNA.369-201ENST00000365568 117 ntBASIC1.53□□□□□ -2.16
USP31Q70CQ4 MIR520F-201ENST00000384824 87 ntBASIC1.53□□□□□ -2.16
USP31Q70CQ4 RNU6-162P-201ENST00000516228 103 ntBASIC1.53□□□□□ -2.16
USP31Q70CQ4 MIR8066-201ENST00000617280 78 ntBASIC1.53□□□□□ -2.16
USP31Q70CQ4 Y_RNA.57-201ENST00000362806 113 ntBASIC1.52□□□□□ -2.17
USP31Q70CQ4 MIR635-201ENST00000384830 98 ntBASIC1.52□□□□□ -2.17
USP31Q70CQ4 MIR200A-201ENST00000384875 90 ntBASIC1.52□□□□□ -2.17
USP31Q70CQ4 Y_RNA.697-201ENST00000516776 113 ntBASIC1.52□□□□□ -2.17
USP31Q70CQ4 MIR548H5-201ENST00000580314 60 ntBASIC1.52□□□□□ -2.17
USP31Q70CQ4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
USP31Q70CQ4 RNU6-1244P-201ENST00000363614 108 ntBASIC1.51□□□□□ -2.17
USP31Q70CQ4 MIR19B1-201ENST00000384829 87 ntBASIC1.51□□□□□ -2.17
USP31Q70CQ4 MIR598-201ENST00000384868 97 ntBASIC1.51□□□□□ -2.17
USP31Q70CQ4 MIR942-201ENST00000401111 86 ntBASIC1.51□□□□□ -2.17
USP31Q70CQ4 MIR1827-201ENST00000408549 66 ntBASIC1.51□□□□□ -2.17
USP31Q70CQ4 SNRPGP12-201ENST00000449481 213 ntBASIC1.51□□□□□ -2.17
USP31Q70CQ4 RNU7-102P-201ENST00000458948 62 ntBASIC1.51□□□□□ -2.17
USP31Q70CQ4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
USP31Q70CQ4 SNORD58A-201ENST00000383875 65 ntBASIC1.5□□□□□ -2.17
USP31Q70CQ4 MIR181B2-201ENST00000385004 89 ntBASIC1.5□□□□□ -2.17
USP31Q70CQ4 SNORD89-201ENST00000390981 114 ntBASIC1.5□□□□□ -2.17
USP31Q70CQ4 RNU7-56P-201ENST00000458744 62 ntBASIC1.5□□□□□ -2.17
USP31Q70CQ4 Y_RNA.56-201ENST00000362798 112 ntBASIC1.49□□□□□ -2.17
USP31Q70CQ4 MIR488-201ENST00000365739 83 ntBASIC1.49□□□□□ -2.17
USP31Q70CQ4 U7.7-201ENST00000459276 60 ntBASIC1.49□□□□□ -2.17
USP31Q70CQ4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.49□□□□□ -2.17
USP31Q70CQ4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.49□□□□□ -2.17
USP31Q70CQ4 MIR373-201ENST00000362273 69 ntBASIC1.48□□□□□ -2.17
USP31Q70CQ4 Y_RNA.42-201ENST00000362660 108 ntBASIC1.48□□□□□ -2.17
USP31Q70CQ4 SNORD116-10-201ENST00000363791 102 ntBASIC1.48□□□□□ -2.17
USP31Q70CQ4 Y_RNA.290-201ENST00000364879 114 ntBASIC1.48□□□□□ -2.17
USP31Q70CQ4 AC087343.1-201ENST00000477341 475 ntBASIC1.48□□□□□ -2.17
USP31Q70CQ4 RNU6-1110P-201ENST00000516462 101 ntBASIC1.48□□□□□ -2.17
USP31Q70CQ4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
USP31Q70CQ4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
USP31Q70CQ4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
USP31Q70CQ4 SNORD100-201ENST00000408573 76 ntBASIC1.47□□□□□ -2.17
USP31Q70CQ4 RNA5SP404-201ENST00000517118 132 ntBASIC1.47□□□□□ -2.17
USP31Q70CQ4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.47□□□□□ -2.17
USP31Q70CQ4 MIR4295-201ENST00000585286 85 ntBASIC1.47□□□□□ -2.17
USP31Q70CQ4 RNU6-369P-201ENST00000362515 102 ntBASIC1.47□□□□□ -2.17
USP31Q70CQ4 RNU6-294P-201ENST00000364999 102 ntBASIC1.47□□□□□ -2.17
USP31Q70CQ4 MIR618-201ENST00000385287 98 ntBASIC1.47□□□□□ -2.17
USP31Q70CQ4 SNORD114-24-201ENST00000365029 72 ntBASIC1.46□□□□□ -2.18
USP31Q70CQ4 RNU6-49P-201ENST00000384256 107 ntBASIC1.46□□□□□ -2.18
USP31Q70CQ4 Y_RNA.536-201ENST00000384621 113 ntBASIC1.46□□□□□ -2.18
USP31Q70CQ4 RNU6-939P-201ENST00000384634 107 ntBASIC1.46□□□□□ -2.18
USP31Q70CQ4 RNY1P7-201ENST00000384743 110 ntBASIC1.46□□□□□ -2.18
USP31Q70CQ4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.46□□□□□ -2.18
USP31Q70CQ4 RNU6-535P-201ENST00000384722 107 ntBASIC1.45□□□□□ -2.18
USP31Q70CQ4 RNU6-243P-201ENST00000391140 107 ntBASIC1.45□□□□□ -2.18
USP31Q70CQ4 SNORD124-201ENST00000459577 104 ntBASIC1.45□□□□□ -2.18
USP31Q70CQ4 RNU6-844P-201ENST00000517175 102 ntBASIC1.45□□□□□ -2.18
USP31Q70CQ4 AP003327.1-201ENST00000529684 127 ntBASIC1.45□□□□□ -2.18
USP31Q70CQ4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.44□□□□□ -2.18
USP31Q70CQ4 RNU1-124P-201ENST00000363861 145 ntBASIC1.44□□□□□ -2.18
USP31Q70CQ4 Y_RNA.190-201ENST00000363964 101 ntBASIC1.44□□□□□ -2.18
USP31Q70CQ4 RNU6-1254P-201ENST00000391266 104 ntBASIC1.44□□□□□ -2.18
USP31Q70CQ4 RNU6-448P-201ENST00000517052 107 ntBASIC1.44□□□□□ -2.18
USP31Q70CQ4 AL513043.2-201ENST00000573941 143 ntBASIC1.44□□□□□ -2.18
USP31Q70CQ4 AC025627.3-201ENST00000582078 182 ntBASIC1.44□□□□□ -2.18
USP31Q70CQ4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.43□□□□□ -2.18
USP31Q70CQ4 MIR516A2-201ENST00000384888 90 ntBASIC1.43□□□□□ -2.18
USP31Q70CQ4 MIR516A1-201ENST00000385033 90 ntBASIC1.43□□□□□ -2.18
USP31Q70CQ4 MIR520H-201ENST00000385126 88 ntBASIC1.43□□□□□ -2.18
USP31Q70CQ4 SNORD63B-201ENST00000411005 70 ntBASIC1.43□□□□□ -2.18
USP31Q70CQ4 RNU6-1134P-201ENST00000365156 101 ntBASIC1.42□□□□□ -2.18
USP31Q70CQ4 MIR150-201ENST00000385048 84 ntBASIC1.42□□□□□ -2.18
USP31Q70CQ4 SNORD105-201ENST00000386910 85 ntBASIC1.42□□□□□ -2.18
USP31Q70CQ4 AC026421.1-201ENST00000519101 163 ntBASIC1.42□□□□□ -2.18
USP31Q70CQ4 AC138907.6-201ENST00000568401 126 ntBASIC1.42□□□□□ -2.18
USP31Q70CQ4 AC138869.1-201ENST00000568623 124 ntBASIC1.42□□□□□ -2.18
USP31Q70CQ4 AC008608.1-201ENST00000603910 127 ntBASIC1.42□□□□□ -2.18
USP31Q70CQ4 AC025521.1-201ENST00000621624 286 ntBASIC1.42□□□□□ -2.18
USP31Q70CQ4 SNORD114-21-201ENST00000606412 72 ntBASIC1.41□□□□□ -2.18
USP31Q70CQ4 RNU4-38P-201ENST00000364472 129 ntBASIC1.4□□□□□ -2.19
USP31Q70CQ4 Y_RNA.558-201ENST00000384685 113 ntBASIC1.4□□□□□ -2.19
USP31Q70CQ4 AC092628.1-201ENST00000436250 252 ntBASIC1.4□□□□□ -2.19
USP31Q70CQ4 TRAJ51-201ENST00000504127 63 ntBASIC1.4□□□□□ -2.19
USP31Q70CQ4 Y_RNA.205-201ENST00000364128 113 ntBASIC1.39□□□□□ -2.19
USP31Q70CQ4 RNA5SP117-201ENST00000365294 118 ntBASIC1.39□□□□□ -2.19
USP31Q70CQ4 SNORD116-22-201ENST00000384430 92 ntBASIC1.39□□□□□ -2.19
USP31Q70CQ4 Y_RNA.174-201ENST00000363781 105 ntBASIC1.38□□□□□ -2.19
USP31Q70CQ4 MIR532-201ENST00000385025 91 ntBASIC1.38□□□□□ -2.19
USP31Q70CQ4 RNU7-106P-201ENST00000459514 67 ntBASIC1.38□□□□□ -2.19
USP31Q70CQ4 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.38□□□□□ -2.19
USP31Q70CQ4 Y_RNA.374-201ENST00000365606 101 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 259.5 ms