Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 SNORD58A-201ENST00000383875 65 ntBASIC1.42□□□□□ -2.18
RUFY4Q6ZNE9 RNU7-56P-201ENST00000458744 62 ntBASIC1.42□□□□□ -2.18
RUFY4Q6ZNE9 Y_RNA.290-201ENST00000364879 114 ntBASIC1.41□□□□□ -2.18
RUFY4Q6ZNE9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
RUFY4Q6ZNE9 RNU1-119P-201ENST00000391122 165 ntBASIC1.41□□□□□ -2.18
RUFY4Q6ZNE9 BX276092.1-201ENST00000427368 251 ntBASIC1.41□□□□□ -2.18
RUFY4Q6ZNE9 AC019288.1-201ENST00000557918 224 ntBASIC1.41□□□□□ -2.18
RUFY4Q6ZNE9 AC006254.2-201ENST00000603259 279 ntBASIC1.41□□□□□ -2.18
RUFY4Q6ZNE9 AC013244.2-201ENST00000603396 103 ntBASIC1.41□□□□□ -2.18
RUFY4Q6ZNE9 AC103810.7-201ENST00000607821 91 ntBASIC1.41□□□□□ -2.18
RUFY4Q6ZNE9 RNU6-1131P-201ENST00000364955 107 ntBASIC1.4□□□□□ -2.19
RUFY4Q6ZNE9 MIR519A1-201ENST00000385257 85 ntBASIC1.4□□□□□ -2.19
RUFY4Q6ZNE9 AC015818.7-201ENST00000428754 109 ntBASIC1.4□□□□□ -2.19
RUFY4Q6ZNE9 AC087499.7-201ENST00000441958 109 ntBASIC1.4□□□□□ -2.19
RUFY4Q6ZNE9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.4□□□□□ -2.19
RUFY4Q6ZNE9 Y_RNA.57-201ENST00000362806 113 ntBASIC1.39□□□□□ -2.19
RUFY4Q6ZNE9 MIR635-201ENST00000384830 98 ntBASIC1.39□□□□□ -2.19
RUFY4Q6ZNE9 MIR618-201ENST00000385287 98 ntBASIC1.39□□□□□ -2.19
RUFY4Q6ZNE9 SNORD100-201ENST00000408573 76 ntBASIC1.39□□□□□ -2.19
RUFY4Q6ZNE9 RNU7-102P-201ENST00000458948 62 ntBASIC1.39□□□□□ -2.19
RUFY4Q6ZNE9 RNA5SP404-201ENST00000517118 132 ntBASIC1.39□□□□□ -2.19
RUFY4Q6ZNE9 RNU6-844P-201ENST00000517175 102 ntBASIC1.39□□□□□ -2.19
RUFY4Q6ZNE9 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
RUFY4Q6ZNE9 MIR181B2-201ENST00000385004 89 ntBASIC1.38□□□□□ -2.19
RUFY4Q6ZNE9 MIR150-201ENST00000385048 84 ntBASIC1.38□□□□□ -2.19
RUFY4Q6ZNE9 Y_RNA.697-201ENST00000516776 113 ntBASIC1.38□□□□□ -2.19
RUFY4Q6ZNE9 MIR26B-201ENST00000362251 77 ntBASIC1.37□□□□□ -2.19
RUFY4Q6ZNE9 SNORD114-27-201ENST00000363766 70 ntBASIC1.37□□□□□ -2.19
RUFY4Q6ZNE9 SNORD114-24-201ENST00000365029 72 ntBASIC1.37□□□□□ -2.19
RUFY4Q6ZNE9 MIR520F-201ENST00000384824 87 ntBASIC1.37□□□□□ -2.19
RUFY4Q6ZNE9 RNA5SP480-201ENST00000516840 109 ntBASIC1.37□□□□□ -2.19
RUFY4Q6ZNE9 MIR6515-201ENST00000619843 57 ntBASIC1.37□□□□□ -2.19
RUFY4Q6ZNE9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
RUFY4Q6ZNE9 RNU6-294P-201ENST00000364999 102 ntBASIC1.36□□□□□ -2.19
RUFY4Q6ZNE9 RNU6-49P-201ENST00000384256 107 ntBASIC1.36□□□□□ -2.19
RUFY4Q6ZNE9 Y_RNA.536-201ENST00000384621 113 ntBASIC1.36□□□□□ -2.19
RUFY4Q6ZNE9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
RUFY4Q6ZNE9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.36□□□□□ -2.19
RUFY4Q6ZNE9 Y_RNA.558-201ENST00000384685 113 ntBASIC1.35□□□□□ -2.19
RUFY4Q6ZNE9 RNU6-1254P-201ENST00000391266 104 ntBASIC1.35□□□□□ -2.19
RUFY4Q6ZNE9 RNU6-162P-201ENST00000516228 103 ntBASIC1.35□□□□□ -2.19
RUFY4Q6ZNE9 RNU6-448P-201ENST00000517052 107 ntBASIC1.35□□□□□ -2.19
RUFY4Q6ZNE9 AL513043.2-201ENST00000573941 143 ntBASIC1.35□□□□□ -2.19
RUFY4Q6ZNE9 AC025627.3-201ENST00000582078 182 ntBASIC1.35□□□□□ -2.19
RUFY4Q6ZNE9 MIR942-201ENST00000401111 86 ntBASIC1.34□□□□□ -2.19
RUFY4Q6ZNE9 SNORD63B-201ENST00000411005 70 ntBASIC1.34□□□□□ -2.19
RUFY4Q6ZNE9 RNU6-1223P-201ENST00000517124 104 ntBASIC1.34□□□□□ -2.19
RUFY4Q6ZNE9 AC026421.1-201ENST00000519101 163 ntBASIC1.34□□□□□ -2.19
RUFY4Q6ZNE9 AC138907.6-201ENST00000568401 126 ntBASIC1.34□□□□□ -2.19
RUFY4Q6ZNE9 AC138869.1-201ENST00000568623 124 ntBASIC1.34□□□□□ -2.19
RUFY4Q6ZNE9 RNU1-93P-201ENST00000364704 169 ntBASIC1.33□□□□□ -2.2
RUFY4Q6ZNE9 SNORD89-201ENST00000390981 114 ntBASIC1.33□□□□□ -2.2
RUFY4Q6ZNE9 AC022709.1-201ENST00000615967 87 ntBASIC1.33□□□□□ -2.2
RUFY4Q6ZNE9 AC025521.1-201ENST00000621624 286 ntBASIC1.33□□□□□ -2.2
RUFY4Q6ZNE9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.33□□□□□ -2.2
RUFY4Q6ZNE9 Y_RNA.174-201ENST00000363781 105 ntBASIC1.32□□□□□ -2.2
RUFY4Q6ZNE9 Y_RNA.540-201ENST00000384638 111 ntBASIC1.32□□□□□ -2.2
RUFY4Q6ZNE9 RNY1P7-201ENST00000384743 110 ntBASIC1.32□□□□□ -2.2
RUFY4Q6ZNE9 SNORD105-201ENST00000386910 85 ntBASIC1.32□□□□□ -2.2
RUFY4Q6ZNE9 RNU6-243P-201ENST00000391140 107 ntBASIC1.32□□□□□ -2.2
RUFY4Q6ZNE9 AC092628.1-201ENST00000436250 252 ntBASIC1.32□□□□□ -2.2
RUFY4Q6ZNE9 SNORD124-201ENST00000459577 104 ntBASIC1.32□□□□□ -2.2
RUFY4Q6ZNE9 AC008608.1-201ENST00000603910 127 ntBASIC1.32□□□□□ -2.2
RUFY4Q6ZNE9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.32□□□□□ -2.2
RUFY4Q6ZNE9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
RUFY4Q6ZNE9 SNORD36A-201ENST00000362874 73 ntBASIC1.31□□□□□ -2.2
RUFY4Q6ZNE9 RNU6-291P-201ENST00000384720 107 ntBASIC1.31□□□□□ -2.2
RUFY4Q6ZNE9 RNU6-535P-201ENST00000384722 107 ntBASIC1.31□□□□□ -2.2
RUFY4Q6ZNE9 AC097635.1-201ENST00000450678 155 ntBASIC1.31□□□□□ -2.2
RUFY4Q6ZNE9 Y_RNA.648-201ENST00000459455 110 ntBASIC1.31□□□□□ -2.2
RUFY4Q6ZNE9 AC087343.1-201ENST00000477341 475 ntBASIC1.31□□□□□ -2.2
RUFY4Q6ZNE9 TRAJ51-201ENST00000504127 63 ntBASIC1.31□□□□□ -2.2
RUFY4Q6ZNE9 MIR6767-201ENST00000637302 66 ntBASIC1.31□□□□□ -2.2
RUFY4Q6ZNE9 RNU6-1260P-201ENST00000362944 107 ntBASIC1.3□□□□□ -2.2
RUFY4Q6ZNE9 Y_RNA.190-201ENST00000363964 101 ntBASIC1.3□□□□□ -2.2
RUFY4Q6ZNE9 MIR520E-201ENST00000384867 87 ntBASIC1.3□□□□□ -2.2
RUFY4Q6ZNE9 MIR516A2-201ENST00000384888 90 ntBASIC1.3□□□□□ -2.2
RUFY4Q6ZNE9 MIR516A1-201ENST00000385033 90 ntBASIC1.3□□□□□ -2.2
RUFY4Q6ZNE9 MIR520H-201ENST00000385126 88 ntBASIC1.3□□□□□ -2.2
RUFY4Q6ZNE9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.3□□□□□ -2.2
RUFY4Q6ZNE9 MIR151B-201ENST00000584249 96 ntBASIC1.3□□□□□ -2.2
RUFY4Q6ZNE9 MIR4295-201ENST00000585286 85 ntBASIC1.3□□□□□ -2.2
RUFY4Q6ZNE9 MIR6788-201ENST00000618842 66 ntBASIC1.3□□□□□ -2.2
RUFY4Q6ZNE9 SNORD114-26-201ENST00000363543 72 ntBASIC1.29□□□□□ -2.2
RUFY4Q6ZNE9 SNORD116-22-201ENST00000384430 92 ntBASIC1.29□□□□□ -2.2
RUFY4Q6ZNE9 RPS29P1-201ENST00000465274 159 ntBASIC1.29□□□□□ -2.2
RUFY4Q6ZNE9 RNA5SP255-201ENST00000516370 107 ntBASIC1.29□□□□□ -2.2
RUFY4Q6ZNE9 RNU6-939P-201ENST00000384634 107 ntBASIC1.28□□□□□ -2.2
RUFY4Q6ZNE9 AL161932.1-201ENST00000437408 146 ntBASIC1.28□□□□□ -2.2
RUFY4Q6ZNE9 RNU7-106P-201ENST00000459514 67 ntBASIC1.28□□□□□ -2.2
RUFY4Q6ZNE9 RNU6-135P-201ENST00000516769 101 ntBASIC1.28□□□□□ -2.2
RUFY4Q6ZNE9 MIR598-201ENST00000384868 97 ntBASIC1.27□□□□□ -2.21
RUFY4Q6ZNE9 AC244505.6-201ENST00000452829 130 ntBASIC1.27□□□□□ -2.21
RUFY4Q6ZNE9 Y_RNA.809-201ENST00000516058 95 ntBASIC1.27□□□□□ -2.21
RUFY4Q6ZNE9 Y_RNA.36-201ENST00000362602 112 ntBASIC1.26□□□□□ -2.21
RUFY4Q6ZNE9 RNU6-1134P-201ENST00000365156 101 ntBASIC1.26□□□□□ -2.21
RUFY4Q6ZNE9 MIR1302-4-201ENST00000408701 150 ntBASIC1.26□□□□□ -2.21
RUFY4Q6ZNE9 AC002350.1-201ENST00000490759 375 ntBASIC1.26□□□□□ -2.21
RUFY4Q6ZNE9 uc_338.16-201ENST00000621804 95 ntBASIC1.26□□□□□ -2.21
RUFY4Q6ZNE9 MIR1285-1-201ENST00000408593 84 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms