Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.55□□□□□ -2.5
TRIM40Q6P9F5 MIR548AZ-201ENST00000616567 95 ntBASIC-0.55□□□□□ -2.5
TRIM40Q6P9F5 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.55□□□□□ -2.5
TRIM40Q6P9F5 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.55□□□□□ -2.5
TRIM40Q6P9F5 MIR101-1-201ENST00000362265 75 ntBASIC-0.56□□□□□ -2.5
TRIM40Q6P9F5 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.56□□□□□ -2.5
TRIM40Q6P9F5 SNORA63-201ENST00000363450 132 ntBASIC-0.56□□□□□ -2.5
TRIM40Q6P9F5 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.56□□□□□ -2.5
TRIM40Q6P9F5 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.56□□□□□ -2.5
TRIM40Q6P9F5 U8.6-201ENST00000364939 135 ntBASIC-0.56□□□□□ -2.5
TRIM40Q6P9F5 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.56□□□□□ -2.5
TRIM40Q6P9F5 MIR34C-201ENST00000384831 77 ntBASIC-0.56□□□□□ -2.5
TRIM40Q6P9F5 MTCYBP9-201ENST00000431021 303 ntBASIC-0.56□□□□□ -2.5
TRIM40Q6P9F5 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.56□□□□□ -2.5
TRIM40Q6P9F5 RNU7-188P-201ENST00000517063 64 ntBASIC-0.56□□□□□ -2.5
TRIM40Q6P9F5 uc_338.10-201ENST00000621872 182 ntBASIC-0.56□□□□□ -2.5
TRIM40Q6P9F5 MIR4788-201ENST00000639104 80 ntBASIC-0.56□□□□□ -2.5
TRIM40Q6P9F5 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.57□□□□□ -2.5
TRIM40Q6P9F5 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.57□□□□□ -2.5
TRIM40Q6P9F5 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.57□□□□□ -2.5
TRIM40Q6P9F5 MIR181B2-201ENST00000385004 89 ntBASIC-0.57□□□□□ -2.5
TRIM40Q6P9F5 MIR196A2-201ENST00000385189 110 ntBASIC-0.57□□□□□ -2.5
TRIM40Q6P9F5 RNU6-239P-201ENST00000390990 99 ntBASIC-0.57□□□□□ -2.5
TRIM40Q6P9F5 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.57□□□□□ -2.5
TRIM40Q6P9F5 RNU6-111P-201ENST00000517179 105 ntBASIC-0.57□□□□□ -2.5
TRIM40Q6P9F5 YWHAEP2-201ENST00000580066 112 ntBASIC-0.57□□□□□ -2.5
TRIM40Q6P9F5 MIR4493-201ENST00000584016 73 ntBASIC-0.57□□□□□ -2.5
TRIM40Q6P9F5 AC087741.2-201ENST00000619415 172 ntBASIC-0.57□□□□□ -2.5
TRIM40Q6P9F5 MIR655-201ENST00000362159 97 ntBASIC-0.58□□□□□ -2.5
TRIM40Q6P9F5 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.58□□□□□ -2.5
TRIM40Q6P9F5 RNY1P11-201ENST00000363759 113 ntBASIC-0.58□□□□□ -2.5
TRIM40Q6P9F5 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.58□□□□□ -2.5
TRIM40Q6P9F5 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.58□□□□□ -2.5
TRIM40Q6P9F5 MIR516A2-201ENST00000384888 90 ntBASIC-0.58□□□□□ -2.5
TRIM40Q6P9F5 MIR516A1-201ENST00000385033 90 ntBASIC-0.58□□□□□ -2.5
TRIM40Q6P9F5 SNORD37.2-201ENST00000391075 66 ntBASIC-0.58□□□□□ -2.5
TRIM40Q6P9F5 MIR1302-3-201ENST00000408128 138 ntBASIC-0.58□□□□□ -2.5
TRIM40Q6P9F5 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.58□□□□□ -2.5
TRIM40Q6P9F5 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.58□□□□□ -2.5
TRIM40Q6P9F5 AC108081.1-201ENST00000604358 221 ntBASIC-0.58□□□□□ -2.5
TRIM40Q6P9F5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.59□□□□□ -2.5
TRIM40Q6P9F5 RNU4-84P-201ENST00000364200 139 ntBASIC-0.59□□□□□ -2.5
TRIM40Q6P9F5 RNA5SP205-201ENST00000364653 136 ntBASIC-0.59□□□□□ -2.5
TRIM40Q6P9F5 RNU6-35P-201ENST00000384530 107 ntBASIC-0.59□□□□□ -2.5
TRIM40Q6P9F5 RNA5SP451-201ENST00000410588 110 ntBASIC-0.59□□□□□ -2.5
TRIM40Q6P9F5 RNU7-121P-201ENST00000516604 62 ntBASIC-0.59□□□□□ -2.5
TRIM40Q6P9F5 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.59□□□□□ -2.5
TRIM40Q6P9F5 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.59□□□□□ -2.5
TRIM40Q6P9F5 AC062037.2-201ENST00000610137 73 ntBASIC-0.59□□□□□ -2.5
TRIM40Q6P9F5 MIR3658-201ENST00000636291 56 ntBASIC-0.59□□□□□ -2.5
TRIM40Q6P9F5 RNA5SP98-201ENST00000363158 137 ntBASIC-0.6□□□□□ -2.51
TRIM40Q6P9F5 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.6□□□□□ -2.51
TRIM40Q6P9F5 SNORD114-29-201ENST00000364819 70 ntBASIC-0.6□□□□□ -2.51
TRIM40Q6P9F5 SNORD38.2-201ENST00000384470 69 ntBASIC-0.6□□□□□ -2.51
TRIM40Q6P9F5 SNORD115-19-201ENST00000363098 82 ntBASIC-0.61□□□□□ -2.51
TRIM40Q6P9F5 SNORD115-18-201ENST00000363293 82 ntBASIC-0.61□□□□□ -2.51
TRIM40Q6P9F5 SNORD115-17-201ENST00000364612 82 ntBASIC-0.61□□□□□ -2.51
TRIM40Q6P9F5 SNORA20.1-201ENST00000364790 130 ntBASIC-0.61□□□□□ -2.51
TRIM40Q6P9F5 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.61□□□□□ -2.51
TRIM40Q6P9F5 MIR568-201ENST00000385036 95 ntBASIC-0.61□□□□□ -2.51
TRIM40Q6P9F5 MIR2113-201ENST00000459007 91 ntBASIC-0.61□□□□□ -2.51
TRIM40Q6P9F5 RNU7-6P-201ENST00000516845 62 ntBASIC-0.61□□□□□ -2.51
TRIM40Q6P9F5 MIR4460-201ENST00000577862 86 ntBASIC-0.61□□□□□ -2.51
TRIM40Q6P9F5 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.62□□□□□ -2.51
TRIM40Q6P9F5 RNU6-284P-201ENST00000411105 106 ntBASIC-0.62□□□□□ -2.51
TRIM40Q6P9F5 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.62□□□□□ -2.51
TRIM40Q6P9F5 RNU6-521P-201ENST00000516663 105 ntBASIC-0.62□□□□□ -2.51
TRIM40Q6P9F5 SNORA51.5-201ENST00000384126 131 ntBASIC-0.63□□□□□ -2.51
TRIM40Q6P9F5 RPS29P8-201ENST00000445109 171 ntBASIC-0.63□□□□□ -2.51
TRIM40Q6P9F5 RNA5SP395-201ENST00000516567 118 ntBASIC-0.63□□□□□ -2.51
TRIM40Q6P9F5 AC022559.1-201ENST00000520905 205 ntBASIC-0.63□□□□□ -2.51
TRIM40Q6P9F5 MIR548AE1-201ENST00000583292 70 ntBASIC-0.63□□□□□ -2.51
TRIM40Q6P9F5 AC096720.1-201ENST00000604441 183 ntBASIC-0.63□□□□□ -2.51
TRIM40Q6P9F5 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.63□□□□□ -2.51
TRIM40Q6P9F5 AL590491.3-201ENST00000610731 82 ntBASIC-0.63□□□□□ -2.51
TRIM40Q6P9F5 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.64□□□□□ -2.51
TRIM40Q6P9F5 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.64□□□□□ -2.51
TRIM40Q6P9F5 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.64□□□□□ -2.51
TRIM40Q6P9F5 RNU6-287P-201ENST00000516230 98 ntBASIC-0.64□□□□□ -2.51
TRIM40Q6P9F5 MIR3163-201ENST00000581592 73 ntBASIC-0.64□□□□□ -2.51
TRIM40Q6P9F5 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.65□□□□□ -2.51
TRIM40Q6P9F5 RNU6-154P-201ENST00000384306 106 ntBASIC-0.65□□□□□ -2.51
TRIM40Q6P9F5 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.65□□□□□ -2.51
TRIM40Q6P9F5 MT-TY-201ENST00000387409 66 ntBASIC-0.65□□□□□ -2.51
TRIM40Q6P9F5 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.65□□□□□ -2.51
TRIM40Q6P9F5 RNU6-175P-201ENST00000516896 107 ntBASIC-0.65□□□□□ -2.51
TRIM40Q6P9F5 TRDV1-202ENST00000621643 102 ntBASIC-0.65□□□□□ -2.51
TRIM40Q6P9F5 MIR539-201ENST00000365690 78 ntBASIC-0.66□□□□□ -2.52
TRIM40Q6P9F5 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.66□□□□□ -2.52
TRIM40Q6P9F5 MIR604-201ENST00000384880 94 ntBASIC-0.66□□□□□ -2.52
TRIM40Q6P9F5 MT-TI-201ENST00000387365 69 ntBASIC-0.66□□□□□ -2.52
TRIM40Q6P9F5 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.66□□□□□ -2.52
TRIM40Q6P9F5 AC072026.1-201ENST00000605023 201 ntBASIC-0.66□□□□□ -2.52
TRIM40Q6P9F5 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.66□□□□□ -2.52
TRIM40Q6P9F5 AL391099.1-201ENST00000624635 187 ntBASIC-0.66□□□□□ -2.52
TRIM40Q6P9F5 SNORD114-11-201ENST00000363738 75 ntBASIC-0.67□□□□□ -2.52
TRIM40Q6P9F5 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.67□□□□□ -2.52
TRIM40Q6P9F5 RNU6-243P-201ENST00000391140 107 ntBASIC-0.67□□□□□ -2.52
TRIM40Q6P9F5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.67□□□□□ -2.52
TRIM40Q6P9F5 AC021753.1-201ENST00000635724 168 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms