Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SNORD36A-201ENST00000362874 73 ntBASIC1.01□□□□□ -2.25
ZNF549Q6P9A3 SNORA25-201ENST00000384384 134 ntBASIC1.01□□□□□ -2.25
ZNF549Q6P9A3 SNORA72.6-201ENST00000384520 129 ntBASIC1.01□□□□□ -2.25
ZNF549Q6P9A3 RNU6-1152P-201ENST00000384576 107 ntBASIC1.01□□□□□ -2.25
ZNF549Q6P9A3 SNORA26.2-201ENST00000390922 122 ntBASIC1.01□□□□□ -2.25
ZNF549Q6P9A3 SNORD100-201ENST00000408573 76 ntBASIC1.01□□□□□ -2.25
ZNF549Q6P9A3 RNU6-592P-201ENST00000411333 103 ntBASIC1.01□□□□□ -2.25
ZNF549Q6P9A3 RNU7-106P-201ENST00000459514 67 ntBASIC1.01□□□□□ -2.25
ZNF549Q6P9A3 RNU6-765P-201ENST00000516916 99 ntBASIC1.01□□□□□ -2.25
ZNF549Q6P9A3 MIR4295-201ENST00000585286 85 ntBASIC1.01□□□□□ -2.25
ZNF549Q6P9A3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.01□□□□□ -2.25
ZNF549Q6P9A3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
ZNF549Q6P9A3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1□□□□□ -2.25
ZNF549Q6P9A3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
ZNF549Q6P9A3 MIR494-201ENST00000349529 81 ntBASIC1□□□□□ -2.25
ZNF549Q6P9A3 Y_RNA.226-201ENST00000364337 114 ntBASIC1□□□□□ -2.25
ZNF549Q6P9A3 SNORD116-22-201ENST00000384430 92 ntBASIC1□□□□□ -2.25
ZNF549Q6P9A3 MIR516A2-201ENST00000384888 90 ntBASIC1□□□□□ -2.25
ZNF549Q6P9A3 MIR499A-201ENST00000384903 122 ntBASIC1□□□□□ -2.25
ZNF549Q6P9A3 MIR516A1-201ENST00000385033 90 ntBASIC1□□□□□ -2.25
ZNF549Q6P9A3 RNU7-56P-201ENST00000458744 62 ntBASIC1□□□□□ -2.25
ZNF549Q6P9A3 TRAJ51-201ENST00000504127 63 ntBASIC1□□□□□ -2.25
ZNF549Q6P9A3 RNU7-156P-201ENST00000517214 74 ntBASIC1□□□□□ -2.25
ZNF549Q6P9A3 MIR4804-201ENST00000581683 73 ntBASIC1□□□□□ -2.25
ZNF549Q6P9A3 AC008608.1-201ENST00000603910 127 ntBASIC1□□□□□ -2.25
ZNF549Q6P9A3 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
ZNF549Q6P9A3 Y_RNA.73-201ENST00000362910 113 ntBASIC0.99□□□□□ -2.25
ZNF549Q6P9A3 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
ZNF549Q6P9A3 RNU6-820P-201ENST00000384273 107 ntBASIC0.99□□□□□ -2.25
ZNF549Q6P9A3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
ZNF549Q6P9A3 MIR1827-201ENST00000408549 66 ntBASIC0.99□□□□□ -2.25
ZNF549Q6P9A3 MIR1276-201ENST00000408707 83 ntBASIC0.99□□□□□ -2.25
ZNF549Q6P9A3 Y_RNA.609-201ENST00000410669 89 ntBASIC0.99□□□□□ -2.25
ZNF549Q6P9A3 RNU7-85P-201ENST00000458851 63 ntBASIC0.99□□□□□ -2.25
ZNF549Q6P9A3 AC087343.1-201ENST00000477341 475 ntBASIC0.99□□□□□ -2.25
ZNF549Q6P9A3 RNA5SP102-201ENST00000516865 106 ntBASIC0.99□□□□□ -2.25
ZNF549Q6P9A3 MIR6504-201ENST00000613520 61 ntBASIC0.99□□□□□ -2.25
ZNF549Q6P9A3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.99□□□□□ -2.25
ZNF549Q6P9A3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
ZNF549Q6P9A3 RNY1P4-201ENST00000384595 115 ntBASIC0.98□□□□□ -2.25
ZNF549Q6P9A3 MIR19B1-201ENST00000384829 87 ntBASIC0.98□□□□□ -2.25
ZNF549Q6P9A3 MIR519A1-201ENST00000385257 85 ntBASIC0.98□□□□□ -2.25
ZNF549Q6P9A3 MIR1287-201ENST00000408492 90 ntBASIC0.98□□□□□ -2.25
ZNF549Q6P9A3 SNORD63B-201ENST00000411005 70 ntBASIC0.98□□□□□ -2.25
ZNF549Q6P9A3 RNU7-102P-201ENST00000458948 62 ntBASIC0.98□□□□□ -2.25
ZNF549Q6P9A3 RNU6-448P-201ENST00000517052 107 ntBASIC0.98□□□□□ -2.25
ZNF549Q6P9A3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.98□□□□□ -2.25
ZNF549Q6P9A3 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.98□□□□□ -2.25
ZNF549Q6P9A3 RNU6-633P-201ENST00000362612 103 ntBASIC0.97□□□□□ -2.25
ZNF549Q6P9A3 Y_RNA.56-201ENST00000362798 112 ntBASIC0.97□□□□□ -2.25
ZNF549Q6P9A3 SNORD115-27-201ENST00000364430 82 ntBASIC0.97□□□□□ -2.25
ZNF549Q6P9A3 RNA5SP173-201ENST00000364857 136 ntBASIC0.97□□□□□ -2.25
ZNF549Q6P9A3 Y_RNA.536-201ENST00000384621 113 ntBASIC0.97□□□□□ -2.25
ZNF549Q6P9A3 MIR938-201ENST00000401216 83 ntBASIC0.97□□□□□ -2.25
ZNF549Q6P9A3 AL161932.1-201ENST00000437408 146 ntBASIC0.97□□□□□ -2.25
ZNF549Q6P9A3 SNORD4B-201ENST00000459083 72 ntBASIC0.97□□□□□ -2.25
ZNF549Q6P9A3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
ZNF549Q6P9A3 RNA5SP245-201ENST00000364239 121 ntBASIC0.96□□□□□ -2.26
ZNF549Q6P9A3 RNU6-979P-201ENST00000383896 107 ntBASIC0.96□□□□□ -2.26
ZNF549Q6P9A3 RNU6-291P-201ENST00000384720 107 ntBASIC0.96□□□□□ -2.26
ZNF549Q6P9A3 RNU6-1254P-201ENST00000391266 104 ntBASIC0.96□□□□□ -2.26
ZNF549Q6P9A3 AC092628.1-201ENST00000436250 252 ntBASIC0.96□□□□□ -2.26
ZNF549Q6P9A3 snoU13.11-201ENST00000459219 104 ntBASIC0.96□□□□□ -2.26
ZNF549Q6P9A3 Y_RNA.648-201ENST00000459455 110 ntBASIC0.96□□□□□ -2.26
ZNF549Q6P9A3 AC022137.1-201ENST00000483735 151 ntBASIC0.96□□□□□ -2.26
ZNF549Q6P9A3 RMST_2.1-201ENST00000617263 136 ntBASIC0.96□□□□□ -2.26
ZNF549Q6P9A3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
ZNF549Q6P9A3 RNU6-509P-201ENST00000363519 107 ntBASIC0.95□□□□□ -2.26
ZNF549Q6P9A3 Y_RNA.191-201ENST00000363972 113 ntBASIC0.95□□□□□ -2.26
ZNF549Q6P9A3 RNY1P1-201ENST00000364372 112 ntBASIC0.95□□□□□ -2.26
ZNF549Q6P9A3 RNU6-573P-201ENST00000383938 106 ntBASIC0.95□□□□□ -2.26
ZNF549Q6P9A3 MIR222-201ENST00000384992 110 ntBASIC0.95□□□□□ -2.26
ZNF549Q6P9A3 RNU6-994P-201ENST00000410507 111 ntBASIC0.95□□□□□ -2.26
ZNF549Q6P9A3 RNU7-195P-201ENST00000458793 62 ntBASIC0.95□□□□□ -2.26
ZNF549Q6P9A3 RNU6-75P-201ENST00000515944 104 ntBASIC0.95□□□□□ -2.26
ZNF549Q6P9A3 RNU6-977P-201ENST00000516411 103 ntBASIC0.95□□□□□ -2.26
ZNF549Q6P9A3 RNA5SP404-201ENST00000517118 132 ntBASIC0.95□□□□□ -2.26
ZNF549Q6P9A3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.95□□□□□ -2.26
ZNF549Q6P9A3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
ZNF549Q6P9A3 MIR1-1-201ENST00000362147 71 ntBASIC0.94□□□□□ -2.26
ZNF549Q6P9A3 MIR101-2-201ENST00000362195 79 ntBASIC0.94□□□□□ -2.26
ZNF549Q6P9A3 RNU6-364P-201ENST00000384387 107 ntBASIC0.94□□□□□ -2.26
ZNF549Q6P9A3 MIR635-201ENST00000384830 98 ntBASIC0.94□□□□□ -2.26
ZNF549Q6P9A3 MIR100-201ENST00000385259 80 ntBASIC0.94□□□□□ -2.26
ZNF549Q6P9A3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.94□□□□□ -2.26
ZNF549Q6P9A3 Y_RNA.697-201ENST00000516776 113 ntBASIC0.94□□□□□ -2.26
ZNF549Q6P9A3 AP003327.1-201ENST00000529684 127 ntBASIC0.94□□□□□ -2.26
ZNF549Q6P9A3 MIR548H5-201ENST00000580314 60 ntBASIC0.94□□□□□ -2.26
ZNF549Q6P9A3 MIR5588-201ENST00000581890 63 ntBASIC0.94□□□□□ -2.26
ZNF549Q6P9A3 MIR548BB-201ENST00000626714 66 ntBASIC0.94□□□□□ -2.26
ZNF549Q6P9A3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
ZNF549Q6P9A3 RNU6-787P-201ENST00000384032 107 ntBASIC0.93□□□□□ -2.26
ZNF549Q6P9A3 SNORD124-201ENST00000459577 104 ntBASIC0.93□□□□□ -2.26
ZNF549Q6P9A3 OR2A41P-201ENST00000473586 105 ntBASIC0.93□□□□□ -2.26
ZNF549Q6P9A3 IGLL4P-201ENST00000614590 133 ntBASIC0.93□□□□□ -2.26
ZNF549Q6P9A3 uc_338.16-201ENST00000621804 95 ntBASIC0.93□□□□□ -2.26
ZNF549Q6P9A3 AC006160.2-201ENST00000637708 154 ntBASIC0.93□□□□□ -2.26
ZNF549Q6P9A3 RNU6-1260P-201ENST00000362944 107 ntBASIC0.92□□□□□ -2.26
ZNF549Q6P9A3 RNU6-957P-201ENST00000363652 99 ntBASIC0.92□□□□□ -2.26
ZNF549Q6P9A3 RNU1-124P-201ENST00000363861 145 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms