Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC106800.4-201ENST00000614905 153 ntBASIC1.25□□□□□ -2.21
SLC44A4Q53GD3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
SLC44A4Q53GD3 Y_RNA.119-201ENST00000363301 96 ntBASIC1.24□□□□□ -2.21
SLC44A4Q53GD3 SNORD113.3-201ENST00000364630 78 ntBASIC1.24□□□□□ -2.21
SLC44A4Q53GD3 SNORD58A-201ENST00000383875 65 ntBASIC1.24□□□□□ -2.21
SLC44A4Q53GD3 RNU6-820P-201ENST00000384273 107 ntBASIC1.24□□□□□ -2.21
SLC44A4Q53GD3 MIR1255A-201ENST00000408338 113 ntBASIC1.24□□□□□ -2.21
SLC44A4Q53GD3 MIR548J-201ENST00000408833 112 ntBASIC1.24□□□□□ -2.21
SLC44A4Q53GD3 SNORD83.1-201ENST00000411362 77 ntBASIC1.24□□□□□ -2.21
SLC44A4Q53GD3 SNORD124-201ENST00000459577 104 ntBASIC1.24□□□□□ -2.21
SLC44A4Q53GD3 RNU6-638P-201ENST00000516582 104 ntBASIC1.24□□□□□ -2.21
SLC44A4Q53GD3 MIR4491-201ENST00000581087 68 ntBASIC1.24□□□□□ -2.21
SLC44A4Q53GD3 MIR151B-201ENST00000584249 96 ntBASIC1.24□□□□□ -2.21
SLC44A4Q53GD3 MIR4295-201ENST00000585286 85 ntBASIC1.24□□□□□ -2.21
SLC44A4Q53GD3 PVT1_3.1-201ENST00000620853 95 ntBASIC1.24□□□□□ -2.21
SLC44A4Q53GD3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SLC44A4Q53GD3 RNU6-1125P-201ENST00000363601 107 ntBASIC1.23□□□□□ -2.21
SLC44A4Q53GD3 Y_RNA.173-201ENST00000363776 113 ntBASIC1.23□□□□□ -2.21
SLC44A4Q53GD3 RNU6-1124P-201ENST00000384169 107 ntBASIC1.23□□□□□ -2.21
SLC44A4Q53GD3 SNORD38.2-201ENST00000384470 69 ntBASIC1.23□□□□□ -2.21
SLC44A4Q53GD3 MT-TF-201ENST00000387314 71 ntBASIC1.23□□□□□ -2.21
SLC44A4Q53GD3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.23□□□□□ -2.21
SLC44A4Q53GD3 SNORD93-201ENST00000408813 74 ntBASIC1.23□□□□□ -2.21
SLC44A4Q53GD3 BX276092.1-201ENST00000427368 251 ntBASIC1.23□□□□□ -2.21
SLC44A4Q53GD3 AC087343.1-201ENST00000477341 475 ntBASIC1.23□□□□□ -2.21
SLC44A4Q53GD3 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.23□□□□□ -2.21
SLC44A4Q53GD3 MIR6767-201ENST00000637302 66 ntBASIC1.23□□□□□ -2.21
SLC44A4Q53GD3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
SLC44A4Q53GD3 RNU6-1244P-201ENST00000363614 108 ntBASIC1.22□□□□□ -2.21
SLC44A4Q53GD3 Y_RNA.313-201ENST00000365095 103 ntBASIC1.22□□□□□ -2.21
SLC44A4Q53GD3 RNU1-36P-201ENST00000365130 165 ntBASIC1.22□□□□□ -2.21
SLC44A4Q53GD3 RNU6-979P-201ENST00000383896 107 ntBASIC1.22□□□□□ -2.21
SLC44A4Q53GD3 MIR598-201ENST00000384868 97 ntBASIC1.22□□□□□ -2.21
SLC44A4Q53GD3 MIR181B2-201ENST00000385004 89 ntBASIC1.22□□□□□ -2.21
SLC44A4Q53GD3 RNU4-83P-201ENST00000410863 133 ntBASIC1.22□□□□□ -2.21
SLC44A4Q53GD3 MIR18B-201ENST00000454574 71 ntBASIC1.22□□□□□ -2.21
SLC44A4Q53GD3 SNORA25.16-201ENST00000516741 121 ntBASIC1.22□□□□□ -2.21
SLC44A4Q53GD3 AC023934.1-201ENST00000574529 2389 ntBASIC1.21□□□□□ -2.22
SLC44A4Q53GD3 HSBP1P2-201ENST00000299671 229 ntBASIC1.21□□□□□ -2.22
SLC44A4Q53GD3 Y_RNA.96-201ENST00000363092 109 ntBASIC1.21□□□□□ -2.22
SLC44A4Q53GD3 RNU6-403P-201ENST00000363163 104 ntBASIC1.21□□□□□ -2.22
SLC44A4Q53GD3 Y_RNA.219-201ENST00000364232 113 ntBASIC1.21□□□□□ -2.22
SLC44A4Q53GD3 SNORD115-27-201ENST00000364430 82 ntBASIC1.21□□□□□ -2.22
SLC44A4Q53GD3 MIR19B1-201ENST00000384829 87 ntBASIC1.21□□□□□ -2.22
SLC44A4Q53GD3 Y_RNA.588-201ENST00000391254 102 ntBASIC1.21□□□□□ -2.22
SLC44A4Q53GD3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.21□□□□□ -2.22
SLC44A4Q53GD3 RNU6-994P-201ENST00000410507 111 ntBASIC1.21□□□□□ -2.22
SLC44A4Q53GD3 Y_RNA.620-201ENST00000411009 88 ntBASIC1.21□□□□□ -2.22
SLC44A4Q53GD3 RNU7-185P-201ENST00000459215 60 ntBASIC1.21□□□□□ -2.22
SLC44A4Q53GD3 Y_RNA.685-201ENST00000516532 108 ntBASIC1.21□□□□□ -2.22
SLC44A4Q53GD3 RNU6-531P-201ENST00000516694 104 ntBASIC1.21□□□□□ -2.22
SLC44A4Q53GD3 RNY1P1-201ENST00000364372 112 ntBASIC1.2□□□□□ -2.22
SLC44A4Q53GD3 RNU6-934P-201ENST00000365154 107 ntBASIC1.2□□□□□ -2.22
SLC44A4Q53GD3 SNORA72.6-201ENST00000384520 129 ntBASIC1.2□□□□□ -2.22
SLC44A4Q53GD3 SNORD111-201ENST00000408139 94 ntBASIC1.2□□□□□ -2.22
SLC44A4Q53GD3 MIR5588-201ENST00000581890 63 ntBASIC1.2□□□□□ -2.22
SLC44A4Q53GD3 AC025521.1-201ENST00000621624 286 ntBASIC1.2□□□□□ -2.22
SLC44A4Q53GD3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
SLC44A4Q53GD3 RNU6-1276P-201ENST00000365372 104 ntBASIC1.19□□□□□ -2.22
SLC44A4Q53GD3 RNY1P4-201ENST00000384595 115 ntBASIC1.19□□□□□ -2.22
SLC44A4Q53GD3 MIR618-201ENST00000385287 98 ntBASIC1.19□□□□□ -2.22
SLC44A4Q53GD3 RNU6-850P-201ENST00000516934 103 ntBASIC1.19□□□□□ -2.22
SLC44A4Q53GD3 AL513043.2-201ENST00000573941 143 ntBASIC1.19□□□□□ -2.22
SLC44A4Q53GD3 MIR4668-201ENST00000582284 70 ntBASIC1.19□□□□□ -2.22
SLC44A4Q53GD3 MIR6779-201ENST00000617283 64 ntBASIC1.19□□□□□ -2.22
SLC44A4Q53GD3 Y_RNA.36-201ENST00000362602 112 ntBASIC1.18□□□□□ -2.22
SLC44A4Q53GD3 SNORD116-10-201ENST00000363791 102 ntBASIC1.18□□□□□ -2.22
SLC44A4Q53GD3 RNU1-124P-201ENST00000363861 145 ntBASIC1.18□□□□□ -2.22
SLC44A4Q53GD3 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
SLC44A4Q53GD3 MIR4771-2-201ENST00000577758 74 ntBASIC1.18□□□□□ -2.22
SLC44A4Q53GD3 MIR4771-1-201ENST00000582617 74 ntBASIC1.18□□□□□ -2.22
SLC44A4Q53GD3 AC006160.2-201ENST00000637708 154 ntBASIC1.18□□□□□ -2.22
SLC44A4Q53GD3 MIR942-201ENST00000401111 86 ntBASIC1.17□□□□□ -2.22
SLC44A4Q53GD3 SNRPGP12-201ENST00000449481 213 ntBASIC1.17□□□□□ -2.22
SLC44A4Q53GD3 AC013244.2-201ENST00000603396 103 ntBASIC1.17□□□□□ -2.22
SLC44A4Q53GD3 IGLL4P-201ENST00000614590 133 ntBASIC1.17□□□□□ -2.22
SLC44A4Q53GD3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.17□□□□□ -2.22
SLC44A4Q53GD3 Y_RNA.13-201ENST00000362403 112 ntBASIC1.16□□□□□ -2.22
SLC44A4Q53GD3 RNA5SP325-201ENST00000363756 130 ntBASIC1.16□□□□□ -2.22
SLC44A4Q53GD3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SLC44A4Q53GD3 RNU6-480P-201ENST00000384332 107 ntBASIC1.16□□□□□ -2.22
SLC44A4Q53GD3 SNORD116-22-201ENST00000384430 92 ntBASIC1.16□□□□□ -2.22
SLC44A4Q53GD3 MIR1257-201ENST00000408490 117 ntBASIC1.16□□□□□ -2.22
SLC44A4Q53GD3 Y_RNA.609-201ENST00000410669 89 ntBASIC1.16□□□□□ -2.22
SLC44A4Q53GD3 RNU7-171P-201ENST00000459581 62 ntBASIC1.16□□□□□ -2.22
SLC44A4Q53GD3 MIR4666B-201ENST00000578142 81 ntBASIC1.16□□□□□ -2.22
SLC44A4Q53GD3 MIR548BB-201ENST00000626714 66 ntBASIC1.16□□□□□ -2.22
SLC44A4Q53GD3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SLC44A4Q53GD3 Y_RNA.57-201ENST00000362806 113 ntBASIC1.15□□□□□ -2.23
SLC44A4Q53GD3 MIR8066-201ENST00000617280 78 ntBASIC1.15□□□□□ -2.23
SLC44A4Q53GD3 RNU6-369P-201ENST00000362515 102 ntBASIC1.14□□□□□ -2.23
SLC44A4Q53GD3 RNU4-58P-201ENST00000363192 141 ntBASIC1.14□□□□□ -2.23
SLC44A4Q53GD3 Y_RNA.221-201ENST00000364248 96 ntBASIC1.14□□□□□ -2.23
SLC44A4Q53GD3 Y_RNA.244-201ENST00000364484 109 ntBASIC1.14□□□□□ -2.23
SLC44A4Q53GD3 MIR516A2-201ENST00000384888 90 ntBASIC1.14□□□□□ -2.23
SLC44A4Q53GD3 MIR516A1-201ENST00000385033 90 ntBASIC1.14□□□□□ -2.23
SLC44A4Q53GD3 MIR125B2-201ENST00000385128 89 ntBASIC1.14□□□□□ -2.23
SLC44A4Q53GD3 SNORD89-201ENST00000390981 114 ntBASIC1.14□□□□□ -2.23
SLC44A4Q53GD3 RPS26P5-201ENST00000418544 335 ntBASIC1.14□□□□□ -2.23
SLC44A4Q53GD3 RNU6-509P-201ENST00000363519 107 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms