Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SF3B3Q15393 RNU6-1194P-201ENST00000516208 104 ntBASIC1.18□□□□□ -2.22
SF3B3Q15393 MIR4676-201ENST00000583078 72 ntBASIC1.18□□□□□ -2.22
SF3B3Q15393 AC103810.7-201ENST00000607821 91 ntBASIC1.18□□□□□ -2.22
SF3B3Q15393 MIR6082-201ENST00000613604 109 ntBASIC1.18□□□□□ -2.22
SF3B3Q15393 MIR8066-201ENST00000617280 78 ntBASIC1.18□□□□□ -2.22
SF3B3Q15393 MIR6515-201ENST00000619843 57 ntBASIC1.18□□□□□ -2.22
SF3B3Q15393 AC027335.2-201ENST00000624030 375 ntBASIC1.18□□□□□ -2.22
SF3B3Q15393 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
SF3B3Q15393 SNORA72.6-201ENST00000384520 129 ntBASIC1.17□□□□□ -2.22
SF3B3Q15393 BX276092.1-201ENST00000427368 251 ntBASIC1.17□□□□□ -2.22
SF3B3Q15393 RNU6-162P-201ENST00000516228 103 ntBASIC1.17□□□□□ -2.22
SF3B3Q15393 RNU6-844P-201ENST00000517175 102 ntBASIC1.17□□□□□ -2.22
SF3B3Q15393 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.17□□□□□ -2.22
SF3B3Q15393 Y_RNA.13-201ENST00000362403 112 ntBASIC1.16□□□□□ -2.22
SF3B3Q15393 Y_RNA.42-201ENST00000362660 108 ntBASIC1.16□□□□□ -2.22
SF3B3Q15393 SNORD58A-201ENST00000383875 65 ntBASIC1.16□□□□□ -2.22
SF3B3Q15393 RNU6-994P-201ENST00000410507 111 ntBASIC1.16□□□□□ -2.22
SF3B3Q15393 RNU6-765P-201ENST00000516916 99 ntBASIC1.16□□□□□ -2.22
SF3B3Q15393 RNU6-850P-201ENST00000516934 103 ntBASIC1.16□□□□□ -2.22
SF3B3Q15393 RNU7-156P-201ENST00000517214 74 ntBASIC1.16□□□□□ -2.22
SF3B3Q15393 AC006254.2-201ENST00000603259 279 ntBASIC1.16□□□□□ -2.22
SF3B3Q15393 PVT1_3.1-201ENST00000620853 95 ntBASIC1.16□□□□□ -2.22
SF3B3Q15393 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.16□□□□□ -2.22
SF3B3Q15393 RNU1-124P-201ENST00000363861 145 ntBASIC1.15□□□□□ -2.23
SF3B3Q15393 RNU6-294P-201ENST00000364999 102 ntBASIC1.15□□□□□ -2.23
SF3B3Q15393 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SF3B3Q15393 MIR19B1-201ENST00000384829 87 ntBASIC1.15□□□□□ -2.23
SF3B3Q15393 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.15□□□□□ -2.23
SF3B3Q15393 CYP3A137P-201ENST00000562436 69 ntBASIC1.15□□□□□ -2.23
SF3B3Q15393 MIR5000-201ENST00000577717 103 ntBASIC1.15□□□□□ -2.23
SF3B3Q15393 MIR4804-201ENST00000581683 73 ntBASIC1.15□□□□□ -2.23
SF3B3Q15393 SNORD92-201ENST00000585078 85 ntBASIC1.15□□□□□ -2.23
SF3B3Q15393 MIR4679-1-201ENST00000637619 75 ntBASIC1.15□□□□□ -2.23
SF3B3Q15393 RNU6-1125P-201ENST00000363601 107 ntBASIC1.14□□□□□ -2.23
SF3B3Q15393 RNU6-480P-201ENST00000384332 107 ntBASIC1.14□□□□□ -2.23
SF3B3Q15393 MIR181B2-201ENST00000385004 89 ntBASIC1.14□□□□□ -2.23
SF3B3Q15393 MIR1827-201ENST00000408549 66 ntBASIC1.14□□□□□ -2.23
SF3B3Q15393 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.14□□□□□ -2.23
SF3B3Q15393 AC013244.2-201ENST00000603396 103 ntBASIC1.14□□□□□ -2.23
SF3B3Q15393 SNORD116-10-201ENST00000363791 102 ntBASIC1.13□□□□□ -2.23
SF3B3Q15393 Y_RNA.190-201ENST00000363964 101 ntBASIC1.13□□□□□ -2.23
SF3B3Q15393 MIR938-201ENST00000401216 83 ntBASIC1.13□□□□□ -2.23
SF3B3Q15393 SNORD100-201ENST00000408573 76 ntBASIC1.13□□□□□ -2.23
SF3B3Q15393 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.13□□□□□ -2.23
SF3B3Q15393 RNU7-56P-201ENST00000458744 62 ntBASIC1.13□□□□□ -2.23
SF3B3Q15393 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.13□□□□□ -2.23
SF3B3Q15393 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
SF3B3Q15393 MIR1-1-201ENST00000362147 71 ntBASIC1.12□□□□□ -2.23
SF3B3Q15393 MIR100-201ENST00000385259 80 ntBASIC1.12□□□□□ -2.23
SF3B3Q15393 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
SF3B3Q15393 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.12□□□□□ -2.23
SF3B3Q15393 RNU7-102P-201ENST00000458948 62 ntBASIC1.12□□□□□ -2.23
SF3B3Q15393 RNA5SP436-201ENST00000516020 115 ntBASIC1.12□□□□□ -2.23
SF3B3Q15393 RNU6-977P-201ENST00000516411 103 ntBASIC1.12□□□□□ -2.23
SF3B3Q15393 AC026421.1-201ENST00000519101 163 ntBASIC1.12□□□□□ -2.23
SF3B3Q15393 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.12□□□□□ -2.23
SF3B3Q15393 AL513043.2-201ENST00000573941 143 ntBASIC1.12□□□□□ -2.23
SF3B3Q15393 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SF3B3Q15393 Y_RNA.57-201ENST00000362806 113 ntBASIC1.11□□□□□ -2.23
SF3B3Q15393 RNU6-364P-201ENST00000384387 107 ntBASIC1.11□□□□□ -2.23
SF3B3Q15393 AC067940.1-201ENST00000458411 300 ntBASIC1.11□□□□□ -2.23
SF3B3Q15393 AC025521.1-201ENST00000621624 286 ntBASIC1.11□□□□□ -2.23
SF3B3Q15393 Y_RNA.56-201ENST00000362798 112 ntBASIC1.1□□□□□ -2.23
SF3B3Q15393 Y_RNA.558-201ENST00000384685 113 ntBASIC1.1□□□□□ -2.23
SF3B3Q15393 MIR4698-201ENST00000577795 80 ntBASIC1.1□□□□□ -2.23
SF3B3Q15393 AC008608.1-201ENST00000603910 127 ntBASIC1.1□□□□□ -2.23
SF3B3Q15393 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SF3B3Q15393 MIR101-2-201ENST00000362195 79 ntBASIC1.09□□□□□ -2.23
SF3B3Q15393 AP003327.1-201ENST00000529684 127 ntBASIC1.09□□□□□ -2.23
SF3B3Q15393 Y_RNA.536-201ENST00000384621 113 ntBASIC1.08□□□□□ -2.24
SF3B3Q15393 MIR520F-201ENST00000384824 87 ntBASIC1.08□□□□□ -2.24
SF3B3Q15393 MIR598-201ENST00000384868 97 ntBASIC1.08□□□□□ -2.24
SF3B3Q15393 MIR200A-201ENST00000384875 90 ntBASIC1.08□□□□□ -2.24
SF3B3Q15393 MIR516A2-201ENST00000384888 90 ntBASIC1.08□□□□□ -2.24
SF3B3Q15393 MIR516A1-201ENST00000385033 90 ntBASIC1.08□□□□□ -2.24
SF3B3Q15393 RNU1-119P-201ENST00000391122 165 ntBASIC1.08□□□□□ -2.24
SF3B3Q15393 SNORD63B-201ENST00000411005 70 ntBASIC1.08□□□□□ -2.24
SF3B3Q15393 FABP5P4-201ENST00000437203 171 ntBASIC1.08□□□□□ -2.24
SF3B3Q15393 RNU7-106P-201ENST00000459514 67 ntBASIC1.08□□□□□ -2.24
SF3B3Q15393 SNORD124-201ENST00000459577 104 ntBASIC1.08□□□□□ -2.24
SF3B3Q15393 TRAJ51-201ENST00000504127 63 ntBASIC1.08□□□□□ -2.24
SF3B3Q15393 Y_RNA.697-201ENST00000516776 113 ntBASIC1.08□□□□□ -2.24
SF3B3Q15393 RNU6-448P-201ENST00000517052 107 ntBASIC1.08□□□□□ -2.24
SF3B3Q15393 MIR548H5-201ENST00000580314 60 ntBASIC1.08□□□□□ -2.24
SF3B3Q15393 AC103810.9-201ENST00000606688 112 ntBASIC1.08□□□□□ -2.24
SF3B3Q15393 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.08□□□□□ -2.24
SF3B3Q15393 SNORD36A-201ENST00000362874 73 ntBASIC1.07□□□□□ -2.24
SF3B3Q15393 MIR635-201ENST00000384830 98 ntBASIC1.07□□□□□ -2.24
SF3B3Q15393 MIR519A1-201ENST00000385257 85 ntBASIC1.07□□□□□ -2.24
SF3B3Q15393 RNU6-1254P-201ENST00000391266 104 ntBASIC1.07□□□□□ -2.24
SF3B3Q15393 RNU6-1110P-201ENST00000516462 101 ntBASIC1.07□□□□□ -2.24
SF3B3Q15393 RNU7-10P-201ENST00000607194 63 ntBASIC1.07□□□□□ -2.24
SF3B3Q15393 SNORD73B-201ENST00000364394 72 ntBASIC1.06□□□□□ -2.24
SF3B3Q15393 RNU6-291P-201ENST00000384720 107 ntBASIC1.06□□□□□ -2.24
SF3B3Q15393 AC092628.1-201ENST00000436250 252 ntBASIC1.06□□□□□ -2.24
SF3B3Q15393 U7.7-201ENST00000459276 60 ntBASIC1.06□□□□□ -2.24
SF3B3Q15393 RNU6-762P-201ENST00000517107 102 ntBASIC1.06□□□□□ -2.24
SF3B3Q15393 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.06□□□□□ -2.24
SF3B3Q15393 RNU6-1134P-201ENST00000365156 101 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms