Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 RNU6-170P-201ENST00000362832 104 ntBASIC1.11□□□□□ -2.23
SSRP1Q08945 Y_RNA.95-201ENST00000363079 95 ntBASIC1.11□□□□□ -2.23
SSRP1Q08945 Y_RNA.174-201ENST00000363781 105 ntBASIC1.11□□□□□ -2.23
SSRP1Q08945 RNU6-1163P-201ENST00000364516 107 ntBASIC1.11□□□□□ -2.23
SSRP1Q08945 Y_RNA.567-201ENST00000384736 106 ntBASIC1.11□□□□□ -2.23
SSRP1Q08945 MIR635-201ENST00000384830 98 ntBASIC1.11□□□□□ -2.23
SSRP1Q08945 AC011195.1-201ENST00000578177 177 ntBASIC1.11□□□□□ -2.23
SSRP1Q08945 AC103810.9-201ENST00000606688 112 ntBASIC1.11□□□□□ -2.23
SSRP1Q08945 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
SSRP1Q08945 RNA5SP117-201ENST00000365294 118 ntBASIC1.1□□□□□ -2.23
SSRP1Q08945 Y_RNA.540-201ENST00000384638 111 ntBASIC1.1□□□□□ -2.23
SSRP1Q08945 Y_RNA.544-201ENST00000384650 113 ntBASIC1.1□□□□□ -2.23
SSRP1Q08945 AC244098.3-201ENST00000424803 96 ntBASIC1.1□□□□□ -2.23
SSRP1Q08945 AC109327.2-201ENST00000448339 378 ntBASIC1.1□□□□□ -2.23
SSRP1Q08945 MIR3612-201ENST00000579753 87 ntBASIC1.1□□□□□ -2.23
SSRP1Q08945 RNU6-153P-201ENST00000364422 104 ntBASIC1.09□□□□□ -2.23
SSRP1Q08945 Y_RNA.342-201ENST00000365352 113 ntBASIC1.09□□□□□ -2.23
SSRP1Q08945 MIR7-2-201ENST00000384970 110 ntBASIC1.09□□□□□ -2.23
SSRP1Q08945 AC092628.1-201ENST00000436250 252 ntBASIC1.09□□□□□ -2.23
SSRP1Q08945 MIR6515-201ENST00000619843 57 ntBASIC1.09□□□□□ -2.23
SSRP1Q08945 uc_338.16-201ENST00000621804 95 ntBASIC1.09□□□□□ -2.23
SSRP1Q08945 AC091304.10-201ENST00000641554 121 ntBASIC1.09□□□□□ -2.23
SSRP1Q08945 Y_RNA.32-201ENST00000362589 110 ntBASIC1.08□□□□□ -2.24
SSRP1Q08945 RNU6-32P-201ENST00000383948 107 ntBASIC1.08□□□□□ -2.24
SSRP1Q08945 RNU6-13P-201ENST00000384248 107 ntBASIC1.08□□□□□ -2.24
SSRP1Q08945 RNU6-12P-201ENST00000384604 107 ntBASIC1.08□□□□□ -2.24
SSRP1Q08945 RNU6-41P-201ENST00000384741 107 ntBASIC1.08□□□□□ -2.24
SSRP1Q08945 MIR608-201ENST00000384820 100 ntBASIC1.08□□□□□ -2.24
SSRP1Q08945 RNU6-795P-201ENST00000516323 103 ntBASIC1.08□□□□□ -2.24
SSRP1Q08945 AC138907.6-201ENST00000568401 126 ntBASIC1.08□□□□□ -2.24
SSRP1Q08945 AC138869.1-201ENST00000568623 124 ntBASIC1.08□□□□□ -2.24
SSRP1Q08945 MIR151B-201ENST00000584249 96 ntBASIC1.08□□□□□ -2.24
SSRP1Q08945 AC012531.4-201ENST00000616509 177 ntBASIC1.08□□□□□ -2.24
SSRP1Q08945 MIR6788-201ENST00000618842 66 ntBASIC1.08□□□□□ -2.24
SSRP1Q08945 MIR548J-201ENST00000408833 112 ntBASIC1.07□□□□□ -2.24
SSRP1Q08945 TRAJ51-201ENST00000504127 63 ntBASIC1.07□□□□□ -2.24
SSRP1Q08945 RNU6-109P-201ENST00000516364 107 ntBASIC1.07□□□□□ -2.24
SSRP1Q08945 RNU6-184P-201ENST00000516514 107 ntBASIC1.07□□□□□ -2.24
SSRP1Q08945 SNORA31.14-201ENST00000516728 116 ntBASIC1.07□□□□□ -2.24
SSRP1Q08945 RNU6-1223P-201ENST00000517124 104 ntBASIC1.07□□□□□ -2.24
SSRP1Q08945 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.07□□□□□ -2.24
SSRP1Q08945 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.06□□□□□ -2.24
SSRP1Q08945 Y_RNA.57-201ENST00000362806 113 ntBASIC1.06□□□□□ -2.24
SSRP1Q08945 Y_RNA.93-201ENST00000363066 109 ntBASIC1.06□□□□□ -2.24
SSRP1Q08945 Y_RNA.107-201ENST00000363190 121 ntBASIC1.06□□□□□ -2.24
SSRP1Q08945 RNU6-1244P-201ENST00000363614 108 ntBASIC1.06□□□□□ -2.24
SSRP1Q08945 RNU4-45P-201ENST00000365469 141 ntBASIC1.06□□□□□ -2.24
SSRP1Q08945 SNORD63B-201ENST00000411005 70 ntBASIC1.06□□□□□ -2.24
SSRP1Q08945 RNA5SP480-201ENST00000516840 109 ntBASIC1.06□□□□□ -2.24
SSRP1Q08945 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.06□□□□□ -2.24
SSRP1Q08945 MIR4777-201ENST00000583710 86 ntBASIC1.06□□□□□ -2.24
SSRP1Q08945 RNU6-86P-201ENST00000606534 107 ntBASIC1.06□□□□□ -2.24
SSRP1Q08945 Y_RNA.96-201ENST00000363092 109 ntBASIC1.05□□□□□ -2.24
SSRP1Q08945 RNU6-1125P-201ENST00000363601 107 ntBASIC1.05□□□□□ -2.24
SSRP1Q08945 RNU6-480P-201ENST00000384332 107 ntBASIC1.05□□□□□ -2.24
SSRP1Q08945 MIR532-201ENST00000385025 91 ntBASIC1.05□□□□□ -2.24
SSRP1Q08945 MIR519A1-201ENST00000385257 85 ntBASIC1.05□□□□□ -2.24
SSRP1Q08945 ACA64.5-201ENST00000516207 127 ntBASIC1.05□□□□□ -2.24
SSRP1Q08945 RNU6-469P-201ENST00000516253 101 ntBASIC1.05□□□□□ -2.24
SSRP1Q08945 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.05□□□□□ -2.24
SSRP1Q08945 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
SSRP1Q08945 RNA5SP245-201ENST00000364239 121 ntBASIC1.04□□□□□ -2.24
SSRP1Q08945 Y_RNA.467-201ENST00000384297 102 ntBASIC1.04□□□□□ -2.24
SSRP1Q08945 Y_RNA.495-201ENST00000384435 112 ntBASIC1.04□□□□□ -2.24
SSRP1Q08945 RNU6-813P-201ENST00000384691 107 ntBASIC1.04□□□□□ -2.24
SSRP1Q08945 RNU6-135P-201ENST00000516769 101 ntBASIC1.04□□□□□ -2.24
SSRP1Q08945 RNU6-158P-201ENST00000517104 100 ntBASIC1.04□□□□□ -2.24
SSRP1Q08945 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.03□□□□□ -2.24
SSRP1Q08945 AC097635.1-201ENST00000450678 155 ntBASIC1.03□□□□□ -2.24
SSRP1Q08945 MIR548Z-201ENST00000584743 97 ntBASIC1.03□□□□□ -2.24
SSRP1Q08945 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.03□□□□□ -2.24
SSRP1Q08945 PVT1_3.1-201ENST00000620853 95 ntBASIC1.03□□□□□ -2.24
SSRP1Q08945 MIR18A-201ENST00000362310 71 ntBASIC1.02□□□□□ -2.25
SSRP1Q08945 MIR516A2-201ENST00000384888 90 ntBASIC1.02□□□□□ -2.25
SSRP1Q08945 MIR516A1-201ENST00000385033 90 ntBASIC1.02□□□□□ -2.25
SSRP1Q08945 RNA5SP222-201ENST00000411039 105 ntBASIC1.02□□□□□ -2.25
SSRP1Q08945 AC244505.6-201ENST00000452829 130 ntBASIC1.02□□□□□ -2.25
SSRP1Q08945 Y_RNA.705-201ENST00000516862 110 ntBASIC1.02□□□□□ -2.25
SSRP1Q08945 AC211469.2-201ENST00000605461 205 ntBASIC1.02□□□□□ -2.25
SSRP1Q08945 AP001318.4-201ENST00000616637 121 ntBASIC1.02□□□□□ -2.25
SSRP1Q08945 RNU7-106P-201ENST00000459514 67 ntBASIC1.01□□□□□ -2.25
SSRP1Q08945 MIR6857-201ENST00000613267 93 ntBASIC1.01□□□□□ -2.25
SSRP1Q08945 MIR2052-201ENST00000636055 55 ntBASIC1.01□□□□□ -2.25
SSRP1Q08945 MIR598-201ENST00000384868 97 ntBASIC1□□□□□ -2.25
SSRP1Q08945 MIR181B2-201ENST00000385004 89 ntBASIC1□□□□□ -2.25
SSRP1Q08945 MIR644A-201ENST00000385262 94 ntBASIC1□□□□□ -2.25
SSRP1Q08945 RNU6-1254P-201ENST00000391266 104 ntBASIC1□□□□□ -2.25
SSRP1Q08945 RNU7-195P-201ENST00000458793 62 ntBASIC1□□□□□ -2.25
SSRP1Q08945 Y_RNA.809-201ENST00000516058 95 ntBASIC1□□□□□ -2.25
SSRP1Q08945 MIR4698-201ENST00000577795 80 ntBASIC1□□□□□ -2.25
SSRP1Q08945 RNU6-1187P-201ENST00000364771 110 ntBASIC0.99□□□□□ -2.25
SSRP1Q08945 MIR599-201ENST00000385069 95 ntBASIC0.99□□□□□ -2.25
SSRP1Q08945 RNU6-972P-201ENST00000391208 107 ntBASIC0.99□□□□□ -2.25
SSRP1Q08945 MTATP8P2-201ENST00000435212 202 ntBASIC0.99□□□□□ -2.25
SSRP1Q08945 SNORA40.13-201ENST00000516379 120 ntBASIC0.99□□□□□ -2.25
SSRP1Q08945 MIR3678-201ENST00000578455 94 ntBASIC0.99□□□□□ -2.25
SSRP1Q08945 MIR3973-201ENST00000579824 107 ntBASIC0.99□□□□□ -2.25
SSRP1Q08945 AC103810.7-201ENST00000607821 91 ntBASIC0.99□□□□□ -2.25
SSRP1Q08945 MIR373-201ENST00000362273 69 ntBASIC0.98□□□□□ -2.25
SSRP1Q08945 RNU6-1260P-201ENST00000362944 107 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms