Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 RNU7-6P-201ENST00000516845 62 ntBASIC0.05□□□□□ -2.4
LIG4P49917 MIR548AG2-201ENST00000581228 64 ntBASIC0.05□□□□□ -2.4
LIG4P49917 MIR3925-201ENST00000584674 77 ntBASIC0.05□□□□□ -2.4
LIG4P49917 AC104408.1-201ENST00000605241 170 ntBASIC0.05□□□□□ -2.4
LIG4P49917 uc_338.28-201ENST00000612082 187 ntBASIC0.05□□□□□ -2.4
LIG4P49917 Y_RNA.170-201ENST00000363746 110 ntBASIC0.04□□□□□ -2.4
LIG4P49917 Y_RNA.221-201ENST00000364248 96 ntBASIC0.04□□□□□ -2.4
LIG4P49917 Y_RNA.247-201ENST00000364500 92 ntBASIC0.04□□□□□ -2.4
LIG4P49917 RNU6-865P-201ENST00000364772 107 ntBASIC0.04□□□□□ -2.4
LIG4P49917 Y_RNA.360-201ENST00000365512 102 ntBASIC0.04□□□□□ -2.4
LIG4P49917 RNU6-1201P-201ENST00000384227 107 ntBASIC0.04□□□□□ -2.4
LIG4P49917 MIR635-201ENST00000384830 98 ntBASIC0.04□□□□□ -2.4
LIG4P49917 SNORD63B-201ENST00000411005 70 ntBASIC0.04□□□□□ -2.4
LIG4P49917 RNU6-521P-201ENST00000516663 105 ntBASIC0.04□□□□□ -2.4
LIG4P49917 AP001328.1-201ENST00000528550 176 ntBASIC0.04□□□□□ -2.4
LIG4P49917 MIR4290-201ENST00000583807 95 ntBASIC0.04□□□□□ -2.4
LIG4P49917 MIR4768-201ENST00000585270 74 ntBASIC0.04□□□□□ -2.4
LIG4P49917 MIR499B-201ENST00000636498 73 ntBASIC0.04□□□□□ -2.4
LIG4P49917 Y_RNA.35-201ENST00000362601 101 ntBASIC0.03□□□□□ -2.4
LIG4P49917 RNA5SP257-201ENST00000363023 116 ntBASIC0.03□□□□□ -2.4
LIG4P49917 Y_RNA.198-201ENST00000364013 98 ntBASIC0.03□□□□□ -2.4
LIG4P49917 MIR513C-201ENST00000401352 84 ntBASIC0.03□□□□□ -2.4
LIG4P49917 MIR548I2-201ENST00000408348 149 ntBASIC0.03□□□□□ -2.4
LIG4P49917 AL158147.1-201ENST00000443970 75 ntBASIC0.03□□□□□ -2.4
LIG4P49917 RNU6-1265P-201ENST00000516342 103 ntBASIC0.03□□□□□ -2.4
LIG4P49917 RNU6-426P-201ENST00000516464 97 ntBASIC0.03□□□□□ -2.4
LIG4P49917 RNU6-182P-201ENST00000516970 105 ntBASIC0.03□□□□□ -2.4
LIG4P49917 MIR3920-201ENST00000581751 86 ntBASIC0.03□□□□□ -2.4
LIG4P49917 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.03□□□□□ -2.4
LIG4P49917 MIR371B-201ENST00000638082 66 ntBASIC0.03□□□□□ -2.4
LIG4P49917 Y_RNA.30-201ENST00000362572 97 ntBASIC0.02□□□□□ -2.41
LIG4P49917 Y_RNA.323-201ENST00000365157 109 ntBASIC0.02□□□□□ -2.41
LIG4P49917 HMGN2P22-201ENST00000427588 175 ntBASIC0.02□□□□□ -2.41
LIG4P49917 RNU6-1212P-201ENST00000517023 104 ntBASIC0.02□□□□□ -2.41
LIG4P49917 MIR548AD-201ENST00000584780 82 ntBASIC0.02□□□□□ -2.41
LIG4P49917 RNU6-170P-201ENST00000362832 104 ntBASIC0.01□□□□□ -2.41
LIG4P49917 RNU6-1260P-201ENST00000362944 107 ntBASIC0.01□□□□□ -2.41
LIG4P49917 RNU6-647P-201ENST00000364243 107 ntBASIC0.01□□□□□ -2.41
LIG4P49917 Y_RNA.344-201ENST00000365381 112 ntBASIC0.01□□□□□ -2.41
LIG4P49917 RNU6-571P-201ENST00000384128 107 ntBASIC0.01□□□□□ -2.41
LIG4P49917 Y_RNA.506-201ENST00000384494 102 ntBASIC0.01□□□□□ -2.41
LIG4P49917 MIR643-201ENST00000385267 97 ntBASIC0.01□□□□□ -2.41
LIG4P49917 MIR1263-201ENST00000408324 86 ntBASIC0.01□□□□□ -2.41
LIG4P49917 Y_RNA.630-201ENST00000411370 108 ntBASIC0.01□□□□□ -2.41
LIG4P49917 AC093423.1-201ENST00000440817 142 ntBASIC0.01□□□□□ -2.41
LIG4P49917 RNU7-200P-201ENST00000516105 62 ntBASIC0.01□□□□□ -2.41
LIG4P49917 RNU6-850P-201ENST00000516934 103 ntBASIC0.01□□□□□ -2.41
LIG4P49917 RNU6-255P-201ENST00000516957 105 ntBASIC0.01□□□□□ -2.41
LIG4P49917 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
LIG4P49917 MIR3163-201ENST00000581592 73 ntBASIC0.01□□□□□ -2.41
LIG4P49917 U7.2-201ENST00000607576 63 ntBASIC0.01□□□□□ -2.41
LIG4P49917 AC090425.1-201ENST00000610007 140 ntBASIC0.01□□□□□ -2.41
LIG4P49917 AC067863.3-201ENST00000624172 122 ntBASIC0.01□□□□□ -2.41
LIG4P49917 SNORD114-5-201ENST00000362928 70 ntBASIC0□□□□□ -2.41
LIG4P49917 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
LIG4P49917 Y_RNA.555-201ENST00000384673 110 ntBASIC0□□□□□ -2.41
LIG4P49917 MIR145-201ENST00000384967 88 ntBASIC0□□□□□ -2.41
LIG4P49917 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0□□□□□ -2.41
LIG4P49917 MTND4LP9-201ENST00000427694 174 ntBASIC0□□□□□ -2.41
LIG4P49917 RNU6-782P-201ENST00000516852 104 ntBASIC0□□□□□ -2.41
LIG4P49917 RNU6-794P-201ENST00000517261 64 ntBASIC0□□□□□ -2.41
LIG4P49917 MIR4677-201ENST00000584153 80 ntBASIC0□□□□□ -2.41
LIG4P49917 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.01□□□□□ -2.41
LIG4P49917 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.01□□□□□ -2.41
LIG4P49917 MIR516A2-201ENST00000384888 90 ntBASIC-0.01□□□□□ -2.41
LIG4P49917 MIR548D2-201ENST00000384955 97 ntBASIC-0.01□□□□□ -2.41
LIG4P49917 MIR516A1-201ENST00000385033 90 ntBASIC-0.01□□□□□ -2.41
LIG4P49917 RNA5SP136-201ENST00000410906 107 ntBASIC-0.01□□□□□ -2.41
LIG4P49917 AL161932.1-201ENST00000437408 146 ntBASIC-0.01□□□□□ -2.41
LIG4P49917 RNA5SP484-201ENST00000458857 111 ntBASIC-0.01□□□□□ -2.41
LIG4P49917 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.01□□□□□ -2.41
LIG4P49917 MIR5706-201ENST00000579841 80 ntBASIC-0.01□□□□□ -2.41
LIG4P49917 MIR5190-201ENST00000581537 80 ntBASIC-0.01□□□□□ -2.41
LIG4P49917 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.02□□□□□ -2.41
LIG4P49917 RNU6-235P-201ENST00000362644 107 ntBASIC-0.02□□□□□ -2.41
LIG4P49917 SNORD36A-201ENST00000362874 73 ntBASIC-0.02□□□□□ -2.41
LIG4P49917 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.02□□□□□ -2.41
LIG4P49917 SNORD58C-201ENST00000365223 64 ntBASIC-0.02□□□□□ -2.41
LIG4P49917 RNU6-524P-201ENST00000384270 107 ntBASIC-0.02□□□□□ -2.41
LIG4P49917 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.02□□□□□ -2.41
LIG4P49917 MIR610-201ENST00000385139 96 ntBASIC-0.02□□□□□ -2.41
LIG4P49917 RNU6-363P-201ENST00000362895 105 ntBASIC-0.03□□□□□ -2.41
LIG4P49917 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.03□□□□□ -2.41
LIG4P49917 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.03□□□□□ -2.41
LIG4P49917 MIR519E-201ENST00000385075 84 ntBASIC-0.03□□□□□ -2.41
LIG4P49917 RNU6-257P-201ENST00000410238 98 ntBASIC-0.03□□□□□ -2.41
LIG4P49917 RNU6-346P-201ENST00000516288 111 ntBASIC-0.03□□□□□ -2.41
LIG4P49917 MTND5P40-201ENST00000559945 246 ntBASIC-0.03□□□□□ -2.41
LIG4P49917 MIR3613-201ENST00000579844 87 ntBASIC-0.03□□□□□ -2.41
LIG4P49917 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.03□□□□□ -2.41
LIG4P49917 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.04□□□□□ -2.42
LIG4P49917 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.04□□□□□ -2.42
LIG4P49917 RNU1-141P-201ENST00000364623 158 ntBASIC-0.04□□□□□ -2.42
LIG4P49917 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.04□□□□□ -2.42
LIG4P49917 MIR593-201ENST00000384856 100 ntBASIC-0.04□□□□□ -2.42
LIG4P49917 SNORA7.5-201ENST00000410672 110 ntBASIC-0.04□□□□□ -2.42
LIG4P49917 RNU7-165P-201ENST00000458864 60 ntBASIC-0.04□□□□□ -2.42
LIG4P49917 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.04□□□□□ -2.42
LIG4P49917 RNU6-180P-201ENST00000516697 61 ntBASIC-0.04□□□□□ -2.42
LIG4P49917 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 218.4 ms