Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RNU4-84P-201ENST00000364200 139 ntBASIC-0.56□□□□□ -2.5
CASP4P49662 AC093423.1-201ENST00000440817 142 ntBASIC-0.56□□□□□ -2.5
CASP4P49662 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.56□□□□□ -2.5
CASP4P49662 MIR548AG2-201ENST00000581228 64 ntBASIC-0.56□□□□□ -2.5
CASP4P49662 RN7SL660P-201ENST00000614852 299 ntBASIC-0.56□□□□□ -2.5
CASP4P49662 AC087741.2-201ENST00000619415 172 ntBASIC-0.56□□□□□ -2.5
CASP4P49662 uc_338.10-201ENST00000621872 182 ntBASIC-0.56□□□□□ -2.5
CASP4P49662 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.57□□□□□ -2.5
CASP4P49662 RNA5SP275-201ENST00000363936 118 ntBASIC-0.57□□□□□ -2.5
CASP4P49662 U8.6-201ENST00000364939 135 ntBASIC-0.57□□□□□ -2.5
CASP4P49662 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.57□□□□□ -2.5
CASP4P49662 RNU7-188P-201ENST00000517063 64 ntBASIC-0.57□□□□□ -2.5
CASP4P49662 AC108081.1-201ENST00000604358 221 ntBASIC-0.57□□□□□ -2.5
CASP4P49662 MIR6507-201ENST00000613630 70 ntBASIC-0.57□□□□□ -2.5
CASP4P49662 MIR3658-201ENST00000636291 56 ntBASIC-0.57□□□□□ -2.5
CASP4P49662 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.58□□□□□ -2.5
CASP4P49662 SNORD115-19-201ENST00000363098 82 ntBASIC-0.58□□□□□ -2.5
CASP4P49662 SNORD115-18-201ENST00000363293 82 ntBASIC-0.58□□□□□ -2.5
CASP4P49662 SNORD114-28-201ENST00000363610 72 ntBASIC-0.58□□□□□ -2.5
CASP4P49662 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.58□□□□□ -2.5
CASP4P49662 SNORD115-17-201ENST00000364612 82 ntBASIC-0.58□□□□□ -2.5
CASP4P49662 MIR516A2-201ENST00000384888 90 ntBASIC-0.58□□□□□ -2.5
CASP4P49662 MIR181B2-201ENST00000385004 89 ntBASIC-0.58□□□□□ -2.5
CASP4P49662 MIR516A1-201ENST00000385033 90 ntBASIC-0.58□□□□□ -2.5
CASP4P49662 MIR568-201ENST00000385036 95 ntBASIC-0.58□□□□□ -2.5
CASP4P49662 AC096531.1-201ENST00000419107 107 ntBASIC-0.58□□□□□ -2.5
CASP4P49662 YWHAEP2-201ENST00000580066 112 ntBASIC-0.58□□□□□ -2.5
CASP4P49662 MIR4788-201ENST00000639104 80 ntBASIC-0.58□□□□□ -2.5
CASP4P49662 RNY1P11-201ENST00000363759 113 ntBASIC-0.59□□□□□ -2.5
CASP4P49662 SNORD114-29-201ENST00000364819 70 ntBASIC-0.59□□□□□ -2.5
CASP4P49662 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.59□□□□□ -2.5
CASP4P49662 SNORD126-201ENST00000459475 77 ntBASIC-0.59□□□□□ -2.5
CASP4P49662 RNU7-6P-201ENST00000516845 62 ntBASIC-0.59□□□□□ -2.5
CASP4P49662 MIR4460-201ENST00000577862 86 ntBASIC-0.59□□□□□ -2.5
CASP4P49662 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.59□□□□□ -2.5
CASP4P49662 MIR3163-201ENST00000581592 73 ntBASIC-0.59□□□□□ -2.5
CASP4P49662 MIR655-201ENST00000362159 97 ntBASIC-0.6□□□□□ -2.51
CASP4P49662 RNA5SP98-201ENST00000363158 137 ntBASIC-0.6□□□□□ -2.51
CASP4P49662 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.6□□□□□ -2.51
CASP4P49662 MIR2113-201ENST00000459007 91 ntBASIC-0.6□□□□□ -2.51
CASP4P49662 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.6□□□□□ -2.51
CASP4P49662 RNU6-521P-201ENST00000516663 105 ntBASIC-0.6□□□□□ -2.51
CASP4P49662 AC072026.1-201ENST00000605023 201 ntBASIC-0.6□□□□□ -2.51
CASP4P49662 U4.1-201ENST00000620349 87 ntBASIC-0.6□□□□□ -2.51
CASP4P49662 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.61□□□□□ -2.51
CASP4P49662 RNA5SP205-201ENST00000364653 136 ntBASIC-0.61□□□□□ -2.51
CASP4P49662 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.61□□□□□ -2.51
CASP4P49662 SNORA51.5-201ENST00000384126 131 ntBASIC-0.62□□□□□ -2.51
CASP4P49662 AC022559.1-201ENST00000520905 205 ntBASIC-0.62□□□□□ -2.51
CASP4P49662 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.63□□□□□ -2.51
CASP4P49662 AL118496.2-201ENST00000448300 230 ntBASIC-0.63□□□□□ -2.51
CASP4P49662 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.64□□□□□ -2.51
CASP4P49662 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.64□□□□□ -2.51
CASP4P49662 RNU6-243P-201ENST00000391140 107 ntBASIC-0.64□□□□□ -2.51
CASP4P49662 RNU6-287P-201ENST00000516230 98 ntBASIC-0.64□□□□□ -2.51
CASP4P49662 AC130289.1-201ENST00000577321 73 ntBASIC-0.64□□□□□ -2.51
CASP4P49662 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.64□□□□□ -2.51
CASP4P49662 AL590491.3-201ENST00000610731 82 ntBASIC-0.64□□□□□ -2.51
CASP4P49662 TRDV1-202ENST00000621643 102 ntBASIC-0.64□□□□□ -2.51
CASP4P49662 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.65□□□□□ -2.51
CASP4P49662 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.65□□□□□ -2.51
CASP4P49662 RNU6-154P-201ENST00000384306 106 ntBASIC-0.65□□□□□ -2.51
CASP4P49662 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.65□□□□□ -2.51
CASP4P49662 MT-TY-201ENST00000387409 66 ntBASIC-0.65□□□□□ -2.51
CASP4P49662 MIR759-201ENST00000390224 91 ntBASIC-0.65□□□□□ -2.51
CASP4P49662 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.65□□□□□ -2.51
CASP4P49662 RNU6-327P-201ENST00000516270 127 ntBASIC-0.65□□□□□ -2.51
CASP4P49662 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.65□□□□□ -2.51
CASP4P49662 MIR548AE1-201ENST00000583292 70 ntBASIC-0.65□□□□□ -2.51
CASP4P49662 MIR8064-201ENST00000612863 90 ntBASIC-0.65□□□□□ -2.51
CASP4P49662 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.66□□□□□ -2.52
CASP4P49662 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.66□□□□□ -2.52
CASP4P49662 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.66□□□□□ -2.52
CASP4P49662 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.66□□□□□ -2.52
CASP4P49662 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.66□□□□□ -2.52
CASP4P49662 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.66□□□□□ -2.52
CASP4P49662 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.66□□□□□ -2.52
CASP4P49662 AC021753.1-201ENST00000635724 168 ntBASIC-0.66□□□□□ -2.52
CASP4P49662 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.67□□□□□ -2.52
CASP4P49662 MIR539-201ENST00000365690 78 ntBASIC-0.67□□□□□ -2.52
CASP4P49662 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.67□□□□□ -2.52
CASP4P49662 MT-TI-201ENST00000387365 69 ntBASIC-0.67□□□□□ -2.52
CASP4P49662 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.67□□□□□ -2.52
CASP4P49662 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.67□□□□□ -2.52
CASP4P49662 RNU6-175P-201ENST00000516896 107 ntBASIC-0.67□□□□□ -2.52
CASP4P49662 MIR3121-201ENST00000579680 77 ntBASIC-0.67□□□□□ -2.52
CASP4P49662 AP001180.6-201ENST00000584918 159 ntBASIC-0.67□□□□□ -2.52
CASP4P49662 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.67□□□□□ -2.52
CASP4P49662 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.67□□□□□ -2.52
CASP4P49662 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.68□□□□□ -2.52
CASP4P49662 SNORD36A-201ENST00000362874 73 ntBASIC-0.68□□□□□ -2.52
CASP4P49662 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.68□□□□□ -2.52
CASP4P49662 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.68□□□□□ -2.52
CASP4P49662 MIR4802-201ENST00000581881 80 ntBASIC-0.68□□□□□ -2.52
CASP4P49662 U6.100-201ENST00000636230 99 ntBASIC-0.68□□□□□ -2.52
CASP4P49662 MIR1255B1-201ENST00000636325 63 ntBASIC-0.68□□□□□ -2.52
CASP4P49662 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.69□□□□□ -2.52
CASP4P49662 RNU4-11P-201ENST00000365287 132 ntBASIC-0.69□□□□□ -2.52
CASP4P49662 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.69□□□□□ -2.52
CASP4P49662 SNORA32.3-201ENST00000384772 121 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms