Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 Y_RNA.163-201ENST00000363702 113 ntBASIC0.57□□□□□ -2.32
HOXA1P49639 RNU6-106P-201ENST00000384405 107 ntBASIC0.57□□□□□ -2.32
HOXA1P49639 SNORD38.2-201ENST00000384470 69 ntBASIC0.57□□□□□ -2.32
HOXA1P49639 AC109327.2-201ENST00000448339 378 ntBASIC0.57□□□□□ -2.32
HOXA1P49639 RNU6-469P-201ENST00000516253 101 ntBASIC0.57□□□□□ -2.32
HOXA1P49639 RNU6-795P-201ENST00000516323 103 ntBASIC0.57□□□□□ -2.32
HOXA1P49639 RNA5SP94-201ENST00000516917 108 ntBASIC0.57□□□□□ -2.32
HOXA1P49639 MIR548H5-201ENST00000580314 60 ntBASIC0.57□□□□□ -2.32
HOXA1P49639 RNU6-90P-201ENST00000606352 106 ntBASIC0.57□□□□□ -2.32
HOXA1P49639 Y_RNA.174-201ENST00000363781 105 ntBASIC0.56□□□□□ -2.32
HOXA1P49639 Y_RNA.221-201ENST00000364248 96 ntBASIC0.56□□□□□ -2.32
HOXA1P49639 RNU6-1163P-201ENST00000364516 107 ntBASIC0.56□□□□□ -2.32
HOXA1P49639 RNU6-215P-201ENST00000365169 102 ntBASIC0.56□□□□□ -2.32
HOXA1P49639 RNU6-571P-201ENST00000384128 107 ntBASIC0.56□□□□□ -2.32
HOXA1P49639 MIR1287-201ENST00000408492 90 ntBASIC0.56□□□□□ -2.32
HOXA1P49639 MIR1276-201ENST00000408707 83 ntBASIC0.56□□□□□ -2.32
HOXA1P49639 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.56□□□□□ -2.32
HOXA1P49639 AL078603.1-201ENST00000603824 313 ntBASIC0.56□□□□□ -2.32
HOXA1P49639 AL590095.2-201ENST00000604136 117 ntBASIC0.56□□□□□ -2.32
HOXA1P49639 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
HOXA1P49639 MIR450A1-201ENST00000362262 91 ntBASIC0.55□□□□□ -2.32
HOXA1P49639 Y_RNA.57-201ENST00000362806 113 ntBASIC0.55□□□□□ -2.32
HOXA1P49639 SNORD115-24-201ENST00000363528 82 ntBASIC0.55□□□□□ -2.32
HOXA1P49639 Y_RNA.173-201ENST00000363776 113 ntBASIC0.55□□□□□ -2.32
HOXA1P49639 RNU1-93P-201ENST00000364704 169 ntBASIC0.55□□□□□ -2.32
HOXA1P49639 RNA5SP517-201ENST00000364724 117 ntBASIC0.55□□□□□ -2.32
HOXA1P49639 Y_RNA.377-201ENST00000365644 108 ntBASIC0.55□□□□□ -2.32
HOXA1P49639 Y_RNA.467-201ENST00000384297 102 ntBASIC0.55□□□□□ -2.32
HOXA1P49639 RNU6-110P-201ENST00000384508 104 ntBASIC0.55□□□□□ -2.32
HOXA1P49639 MIR599-201ENST00000385069 95 ntBASIC0.55□□□□□ -2.32
HOXA1P49639 RNU6-109P-201ENST00000516364 107 ntBASIC0.55□□□□□ -2.32
HOXA1P49639 RNU6-184P-201ENST00000516514 107 ntBASIC0.55□□□□□ -2.32
HOXA1P49639 RNU6-86P-201ENST00000606534 107 ntBASIC0.55□□□□□ -2.32
HOXA1P49639 MIR6835-201ENST00000621552 64 ntBASIC0.55□□□□□ -2.32
HOXA1P49639 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.55□□□□□ -2.32
HOXA1P49639 MIR373-201ENST00000362273 69 ntBASIC0.54□□□□□ -2.32
HOXA1P49639 Y_RNA.226-201ENST00000364337 114 ntBASIC0.54□□□□□ -2.32
HOXA1P49639 Y_RNA.342-201ENST00000365352 113 ntBASIC0.54□□□□□ -2.32
HOXA1P49639 RNU6-945P-201ENST00000383947 107 ntBASIC0.54□□□□□ -2.32
HOXA1P49639 RNU6-44P-201ENST00000384045 107 ntBASIC0.54□□□□□ -2.32
HOXA1P49639 MIR590-201ENST00000385008 97 ntBASIC0.54□□□□□ -2.32
HOXA1P49639 AL161932.1-201ENST00000437408 146 ntBASIC0.54□□□□□ -2.32
HOXA1P49639 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.54□□□□□ -2.32
HOXA1P49639 AC138907.6-201ENST00000568401 126 ntBASIC0.54□□□□□ -2.32
HOXA1P49639 AC138869.1-201ENST00000568623 124 ntBASIC0.54□□□□□ -2.32
HOXA1P49639 MIR4452-201ENST00000583004 71 ntBASIC0.54□□□□□ -2.32
HOXA1P49639 SNORA25.18-201ENST00000607153 114 ntBASIC0.54□□□□□ -2.32
HOXA1P49639 AC012531.4-201ENST00000616509 177 ntBASIC0.54□□□□□ -2.32
HOXA1P49639 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
HOXA1P49639 AC244669.1-204ENST00000621564 178 ntBASIC0.54□□□□□ -2.32
HOXA1P49639 SNORD28-201ENST00000384706 75 ntBASIC0.53□□□□□ -2.32
HOXA1P49639 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.53□□□□□ -2.32
HOXA1P49639 AC244505.6-201ENST00000452829 130 ntBASIC0.53□□□□□ -2.32
HOXA1P49639 Y_RNA.809-201ENST00000516058 95 ntBASIC0.53□□□□□ -2.32
HOXA1P49639 RNU6-904P-201ENST00000516206 101 ntBASIC0.53□□□□□ -2.32
HOXA1P49639 RNU4-54P-201ENST00000516428 129 ntBASIC0.53□□□□□ -2.32
HOXA1P49639 RNU7-161P-201ENST00000517289 62 ntBASIC0.53□□□□□ -2.32
HOXA1P49639 AC096720.1-201ENST00000604441 183 ntBASIC0.53□□□□□ -2.32
HOXA1P49639 RNU6-1229P-201ENST00000364295 107 ntBASIC0.52□□□□□ -2.33
HOXA1P49639 SNORD114-22-201ENST00000365423 72 ntBASIC0.52□□□□□ -2.33
HOXA1P49639 SNORA51.5-201ENST00000384126 131 ntBASIC0.52□□□□□ -2.33
HOXA1P49639 RNU6-524P-201ENST00000384270 107 ntBASIC0.52□□□□□ -2.33
HOXA1P49639 MIR181B2-201ENST00000385004 89 ntBASIC0.52□□□□□ -2.33
HOXA1P49639 MIR1302-5-201ENST00000408164 150 ntBASIC0.52□□□□□ -2.33
HOXA1P49639 RNU7-104P-201ENST00000459398 79 ntBASIC0.52□□□□□ -2.33
HOXA1P49639 RNA5SP47-201ENST00000517230 109 ntBASIC0.52□□□□□ -2.33
HOXA1P49639 AC092634.7-201ENST00000621022 103 ntBASIC0.52□□□□□ -2.33
HOXA1P49639 MIR6734-201ENST00000621166 68 ntBASIC0.52□□□□□ -2.33
HOXA1P49639 MIR6767-201ENST00000637302 66 ntBASIC0.52□□□□□ -2.33
HOXA1P49639 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
HOXA1P49639 RNU6-1244P-201ENST00000363614 108 ntBASIC0.51□□□□□ -2.33
HOXA1P49639 RNU4-36P-201ENST00000364294 144 ntBASIC0.51□□□□□ -2.33
HOXA1P49639 RNU6-716P-201ENST00000365621 103 ntBASIC0.51□□□□□ -2.33
HOXA1P49639 RNU6-756P-201ENST00000383997 107 ntBASIC0.51□□□□□ -2.33
HOXA1P49639 SNORA8.2-201ENST00000384372 139 ntBASIC0.51□□□□□ -2.33
HOXA1P49639 MIR508-201ENST00000384857 115 ntBASIC0.51□□□□□ -2.33
HOXA1P49639 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
HOXA1P49639 AL035461.1-201ENST00000421490 332 ntBASIC0.51□□□□□ -2.33
HOXA1P49639 AC097635.1-201ENST00000450678 155 ntBASIC0.51□□□□□ -2.33
HOXA1P49639 RNA5SP220-201ENST00000516298 104 ntBASIC0.51□□□□□ -2.33
HOXA1P49639 MIR4777-201ENST00000583710 86 ntBASIC0.51□□□□□ -2.33
HOXA1P49639 RNU7-10P-201ENST00000607194 63 ntBASIC0.51□□□□□ -2.33
HOXA1P49639 AC025521.1-201ENST00000621624 286 ntBASIC0.51□□□□□ -2.33
HOXA1P49639 Y_RNA.95-201ENST00000363079 95 ntBASIC0.5□□□□□ -2.33
HOXA1P49639 RNU4-45P-201ENST00000365469 141 ntBASIC0.5□□□□□ -2.33
HOXA1P49639 RNU6-919P-201ENST00000516731 104 ntBASIC0.5□□□□□ -2.33
HOXA1P49639 RNA5SP268-201ENST00000516828 124 ntBASIC0.5□□□□□ -2.33
HOXA1P49639 RNU6-537P-201ENST00000517277 103 ntBASIC0.5□□□□□ -2.33
HOXA1P49639 CYP3A137P-201ENST00000562436 69 ntBASIC0.5□□□□□ -2.33
HOXA1P49639 MIR4639-201ENST00000584938 69 ntBASIC0.5□□□□□ -2.33
HOXA1P49639 MIR96-201ENST00000362288 78 ntBASIC0.49□□□□□ -2.33
HOXA1P49639 SNORD36A-201ENST00000362874 73 ntBASIC0.49□□□□□ -2.33
HOXA1P49639 SNORD45B-201ENST00000364617 72 ntBASIC0.49□□□□□ -2.33
HOXA1P49639 MIR520E-201ENST00000384867 87 ntBASIC0.49□□□□□ -2.33
HOXA1P49639 Y_RNA.601-201ENST00000410500 113 ntBASIC0.49□□□□□ -2.33
HOXA1P49639 RPS29P1-201ENST00000465274 159 ntBASIC0.49□□□□□ -2.33
HOXA1P49639 SNORA68.3-201ENST00000515906 83 ntBASIC0.49□□□□□ -2.33
HOXA1P49639 SCARNA23-201ENST00000516060 130 ntBASIC0.49□□□□□ -2.33
HOXA1P49639 RNA5SP227-201ENST00000516184 113 ntBASIC0.49□□□□□ -2.33
HOXA1P49639 SCARNA16.5-201ENST00000517114 183 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 239.2 ms