Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 MIR1468-201ENST00000410600 86 ntBASIC-0.58□□□□□ -2.5
BRCA1P38398 MIR3149-201ENST00000584629 83 ntBASIC-0.58□□□□□ -2.5
BRCA1P38398 MIR216B-201ENST00000390186 82 ntBASIC-0.58□□□□□ -2.5
BRCA1P38398 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.58□□□□□ -2.5
BRCA1P38398 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.58□□□□□ -2.5
BRCA1P38398 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.58□□□□□ -2.5
BRCA1P38398 MIR3121-201ENST00000579680 77 ntBASIC-0.58□□□□□ -2.5
BRCA1P38398 MIR4308-201ENST00000580634 81 ntBASIC-0.58□□□□□ -2.5
BRCA1P38398 RNU6-170P-201ENST00000362832 104 ntBASIC-0.59□□□□□ -2.5
BRCA1P38398 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.59□□□□□ -2.5
BRCA1P38398 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.59□□□□□ -2.5
BRCA1P38398 RNU6-287P-201ENST00000516230 98 ntBASIC-0.59□□□□□ -2.5
BRCA1P38398 RNY4P20-201ENST00000516678 93 ntBASIC-0.59□□□□□ -2.5
BRCA1P38398 AL590491.3-201ENST00000610731 82 ntBASIC-0.59□□□□□ -2.5
BRCA1P38398 MIR148A-201ENST00000362215 68 ntBASIC-0.6□□□□□ -2.51
BRCA1P38398 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.6□□□□□ -2.51
BRCA1P38398 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.6□□□□□ -2.51
BRCA1P38398 U8.6-201ENST00000364939 135 ntBASIC-0.6□□□□□ -2.51
BRCA1P38398 SNORD77B-201ENST00000391112 67 ntBASIC-0.6□□□□□ -2.51
BRCA1P38398 RNU6-243P-201ENST00000391140 107 ntBASIC-0.6□□□□□ -2.51
BRCA1P38398 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.6□□□□□ -2.51
BRCA1P38398 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.6□□□□□ -2.51
BRCA1P38398 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.6□□□□□ -2.51
BRCA1P38398 RNU6-850P-201ENST00000516934 103 ntBASIC-0.6□□□□□ -2.51
BRCA1P38398 U6.104-201ENST00000637979 90 ntBASIC-0.6□□□□□ -2.51
BRCA1P38398 RNA5SP205-201ENST00000364653 136 ntBASIC-0.61□□□□□ -2.51
BRCA1P38398 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.61□□□□□ -2.51
BRCA1P38398 SNORD38.2-201ENST00000384470 69 ntBASIC-0.61□□□□□ -2.51
BRCA1P38398 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.61□□□□□ -2.51
BRCA1P38398 SNORD75.1-201ENST00000408373 60 ntBASIC-0.61□□□□□ -2.51
BRCA1P38398 RNA5SP67-201ENST00000516422 131 ntBASIC-0.61□□□□□ -2.51
BRCA1P38398 MIR4432-201ENST00000581823 84 ntBASIC-0.61□□□□□ -2.51
BRCA1P38398 AC044792.1-201ENST00000593294 196 ntBASIC-0.61□□□□□ -2.51
BRCA1P38398 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.61□□□□□ -2.51
BRCA1P38398 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.61□□□□□ -2.51
BRCA1P38398 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.61□□□□□ -2.51
BRCA1P38398 RNU6-312P-201ENST00000364629 107 ntBASIC-0.61□□□□□ -2.51
BRCA1P38398 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.61□□□□□ -2.51
BRCA1P38398 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.61□□□□□ -2.51
BRCA1P38398 AL603914.1-201ENST00000401964 204 ntBASIC-0.61□□□□□ -2.51
BRCA1P38398 RNU6-738P-201ENST00000384531 106 ntBASIC-0.62□□□□□ -2.51
BRCA1P38398 RNU6-735P-201ENST00000410612 107 ntBASIC-0.62□□□□□ -2.51
BRCA1P38398 RN7SKP19-201ENST00000516016 252 ntBASIC-0.62□□□□□ -2.51
BRCA1P38398 MIR548AG2-201ENST00000581228 64 ntBASIC-0.62□□□□□ -2.51
BRCA1P38398 AC087741.2-201ENST00000619415 172 ntBASIC-0.62□□□□□ -2.51
BRCA1P38398 U6.100-201ENST00000636230 99 ntBASIC-0.62□□□□□ -2.51
BRCA1P38398 RNU6-275P-201ENST00000364910 107 ntBASIC-0.63□□□□□ -2.51
BRCA1P38398 SNORD58.1-201ENST00000391313 66 ntBASIC-0.63□□□□□ -2.51
BRCA1P38398 RNU2-38P-201ENST00000410856 79 ntBASIC-0.63□□□□□ -2.51
BRCA1P38398 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.63□□□□□ -2.51
BRCA1P38398 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.63□□□□□ -2.51
BRCA1P38398 AC008737.2-201ENST00000599446 118 ntBASIC-0.63□□□□□ -2.51
BRCA1P38398 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.63□□□□□ -2.51
BRCA1P38398 MTCYBP6-201ENST00000441810 138 ntBASIC-0.63□□□□□ -2.51
BRCA1P38398 MIR2113-201ENST00000459007 91 ntBASIC-0.63□□□□□ -2.51
BRCA1P38398 AC093726.3-201ENST00000637588 150 ntBASIC-0.63□□□□□ -2.51
BRCA1P38398 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.64□□□□□ -2.51
BRCA1P38398 RNU6-524P-201ENST00000384270 107 ntBASIC-0.64□□□□□ -2.51
BRCA1P38398 RNU6-455P-201ENST00000384681 107 ntBASIC-0.64□□□□□ -2.51
BRCA1P38398 MIR606-201ENST00000384851 96 ntBASIC-0.64□□□□□ -2.51
BRCA1P38398 MTATP6P23-201ENST00000440153 476 ntBASIC-0.64□□□□□ -2.51
BRCA1P38398 RNU4-71P-201ENST00000516258 113 ntBASIC-0.64□□□□□ -2.51
BRCA1P38398 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.64□□□□□ -2.51
BRCA1P38398 MIR4280-201ENST00000582178 76 ntBASIC-0.64□□□□□ -2.51
BRCA1P38398 AC108081.1-201ENST00000604358 221 ntBASIC-0.64□□□□□ -2.51
BRCA1P38398 RNU6-797P-201ENST00000363101 109 ntBASIC-0.65□□□□□ -2.51
BRCA1P38398 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.65□□□□□ -2.51
BRCA1P38398 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.65□□□□□ -2.51
BRCA1P38398 RNU6-154P-201ENST00000384306 106 ntBASIC-0.65□□□□□ -2.51
BRCA1P38398 RNU6-901P-201ENST00000384593 106 ntBASIC-0.65□□□□□ -2.51
BRCA1P38398 MT-TI-201ENST00000387365 69 ntBASIC-0.65□□□□□ -2.51
BRCA1P38398 SNORD57-201ENST00000448188 72 ntBASIC-0.65□□□□□ -2.51
BRCA1P38398 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.65□□□□□ -2.51
BRCA1P38398 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.65□□□□□ -2.51
BRCA1P38398 AP000676.1-201ENST00000533307 52 ntBASIC-0.65□□□□□ -2.51
BRCA1P38398 MIR4436A-201ENST00000585278 85 ntBASIC-0.65□□□□□ -2.51
BRCA1P38398 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.65□□□□□ -2.51
BRCA1P38398 MIR539-201ENST00000365690 78 ntBASIC-0.65□□□□□ -2.51
BRCA1P38398 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.65□□□□□ -2.51
BRCA1P38398 SNORA75.5-201ENST00000391291 81 ntBASIC-0.65□□□□□ -2.51
BRCA1P38398 RNU6-284P-201ENST00000411105 106 ntBASIC-0.65□□□□□ -2.51
BRCA1P38398 RNY1P9-201ENST00000532431 109 ntBASIC-0.65□□□□□ -2.51
BRCA1P38398 RNU6-90P-201ENST00000606352 106 ntBASIC-0.65□□□□□ -2.51
BRCA1P38398 AL512310.12-203ENST00000640543 90 ntBASIC-0.65□□□□□ -2.51
BRCA1P38398 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.66□□□□□ -2.52
BRCA1P38398 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.66□□□□□ -2.52
BRCA1P38398 MIR759-201ENST00000390224 91 ntBASIC-0.66□□□□□ -2.52
BRCA1P38398 RNU6-918P-201ENST00000391219 106 ntBASIC-0.66□□□□□ -2.52
BRCA1P38398 SNORD115-19-201ENST00000363098 82 ntBASIC-0.67□□□□□ -2.52
BRCA1P38398 SNORD115-18-201ENST00000363293 82 ntBASIC-0.67□□□□□ -2.52
BRCA1P38398 SNORD115-17-201ENST00000364612 82 ntBASIC-0.67□□□□□ -2.52
BRCA1P38398 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.67□□□□□ -2.52
BRCA1P38398 SNORD115-44-201ENST00000365391 82 ntBASIC-0.67□□□□□ -2.52
BRCA1P38398 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.67□□□□□ -2.52
BRCA1P38398 RNU6-521P-201ENST00000516663 105 ntBASIC-0.67□□□□□ -2.52
BRCA1P38398 SNORD114-14-201ENST00000362723 75 ntBASIC-0.67□□□□□ -2.52
BRCA1P38398 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.67□□□□□ -2.52
BRCA1P38398 SNORD114-4-201ENST00000363962 75 ntBASIC-0.67□□□□□ -2.52
BRCA1P38398 MIR601-201ENST00000385256 79 ntBASIC-0.67□□□□□ -2.52
BRCA1P38398 MIR4460-201ENST00000577862 86 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 265 ms