Protein–RNA interactions for Protein: P35498

SCN1A, Sodium channel protein type 1 subunit alpha, humanhuman

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1AP35498 RNU7-13P-201ENST00000516413 62 ntBASIC-0.18□□□□□ -2.44
SCN1AP35498 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.18□□□□□ -2.44
SCN1AP35498 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.18□□□□□ -2.44
SCN1AP35498 MTND5P40-201ENST00000559945 246 ntBASIC-0.18□□□□□ -2.44
SCN1AP35498 AC069503.3-201ENST00000618674 145 ntBASIC-0.18□□□□□ -2.44
SCN1AP35498 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.19□□□□□ -2.44
SCN1AP35498 RNU6-379P-201ENST00000363813 104 ntBASIC-0.19□□□□□ -2.44
SCN1AP35498 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.19□□□□□ -2.44
SCN1AP35498 RNA5SP25-201ENST00000410815 110 ntBASIC-0.19□□□□□ -2.44
SCN1AP35498 AC087741.2-201ENST00000619415 172 ntBASIC-0.19□□□□□ -2.44
SCN1AP35498 RNU6-151P-201ENST00000364158 107 ntBASIC-0.2□□□□□ -2.44
SCN1AP35498 RNU6-302P-201ENST00000365249 107 ntBASIC-0.2□□□□□ -2.44
SCN1AP35498 SNORD14C-201ENST00000365382 88 ntBASIC-0.2□□□□□ -2.44
SCN1AP35498 MIR759-201ENST00000390224 91 ntBASIC-0.2□□□□□ -2.44
SCN1AP35498 AC084368.1-201ENST00000620935 65 ntBASIC-0.2□□□□□ -2.44
SCN1AP35498 RNU6-161P-201ENST00000363051 106 ntBASIC-0.2□□□□□ -2.44
SCN1AP35498 SNORA18.1-201ENST00000363418 128 ntBASIC-0.2□□□□□ -2.44
SCN1AP35498 SNORD95.1-201ENST00000364099 68 ntBASIC-0.2□□□□□ -2.44
SCN1AP35498 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.2□□□□□ -2.44
SCN1AP35498 RNU7-121P-201ENST00000516604 62 ntBASIC-0.2□□□□□ -2.44
SCN1AP35498 MIR4493-201ENST00000584016 73 ntBASIC-0.2□□□□□ -2.44
SCN1AP35498 uc_338.10-201ENST00000621872 182 ntBASIC-0.2□□□□□ -2.44
SCN1AP35498 MIR599-201ENST00000385069 95 ntBASIC-0.21□□□□□ -2.44
SCN1AP35498 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.21□□□□□ -2.44
SCN1AP35498 AC104692.1-201ENST00000472406 90 ntBASIC-0.21□□□□□ -2.44
SCN1AP35498 RNU6-180P-201ENST00000516697 61 ntBASIC-0.21□□□□□ -2.44
SCN1AP35498 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.21□□□□□ -2.44
SCN1AP35498 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.21□□□□□ -2.44
SCN1AP35498 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.21□□□□□ -2.44
SCN1AP35498 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.21□□□□□ -2.44
SCN1AP35498 RNU6-460P-201ENST00000391158 108 ntBASIC-0.21□□□□□ -2.44
SCN1AP35498 SNORD63B-201ENST00000411005 70 ntBASIC-0.21□□□□□ -2.44
SCN1AP35498 Z95118.1-201ENST00000421372 247 ntBASIC-0.21□□□□□ -2.44
SCN1AP35498 RNU7-195P-201ENST00000458793 62 ntBASIC-0.21□□□□□ -2.44
SCN1AP35498 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.21□□□□□ -2.44
SCN1AP35498 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.21□□□□□ -2.44
SCN1AP35498 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.21□□□□□ -2.44
SCN1AP35498 AP001362.1-201ENST00000625165 124 ntBASIC-0.21□□□□□ -2.44
SCN1AP35498 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.22□□□□□ -2.44
SCN1AP35498 RPS29P8-201ENST00000445109 171 ntBASIC-0.22□□□□□ -2.44
SCN1AP35498 RNU7-74P-201ENST00000459104 62 ntBASIC-0.22□□□□□ -2.44
SCN1AP35498 IGLVI-20-201ENST00000519296 130 ntBASIC-0.22□□□□□ -2.44
SCN1AP35498 U7.6-201ENST00000610841 64 ntBASIC-0.22□□□□□ -2.44
SCN1AP35498 RNU6-170P-201ENST00000362832 104 ntBASIC-0.23□□□□□ -2.45
SCN1AP35498 RNU6-682P-201ENST00000363843 106 ntBASIC-0.23□□□□□ -2.45
SCN1AP35498 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.23□□□□□ -2.45
SCN1AP35498 RNU6-243P-201ENST00000391140 107 ntBASIC-0.23□□□□□ -2.45
SCN1AP35498 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.23□□□□□ -2.45
SCN1AP35498 SNORD36A-201ENST00000362874 73 ntBASIC-0.23□□□□□ -2.45
SCN1AP35498 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.23□□□□□ -2.45
SCN1AP35498 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.23□□□□□ -2.45
SCN1AP35498 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.23□□□□□ -2.45
SCN1AP35498 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.23□□□□□ -2.45
SCN1AP35498 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.23□□□□□ -2.45
SCN1AP35498 MIR4752-201ENST00000579672 72 ntBASIC-0.23□□□□□ -2.45
SCN1AP35498 AC108676.2-201ENST00000605225 163 ntBASIC-0.23□□□□□ -2.45
SCN1AP35498 RNA5SP98-201ENST00000363158 137 ntBASIC-0.24□□□□□ -2.45
SCN1AP35498 RNU6-647P-201ENST00000364243 107 ntBASIC-0.24□□□□□ -2.45
SCN1AP35498 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.24□□□□□ -2.45
SCN1AP35498 RNU6-571P-201ENST00000384128 107 ntBASIC-0.24□□□□□ -2.45
SCN1AP35498 AC006210.1-201ENST00000424882 111 ntBASIC-0.24□□□□□ -2.45
SCN1AP35498 SNORD4A-201ENST00000459174 72 ntBASIC-0.24□□□□□ -2.45
SCN1AP35498 NAMPTP3-201ENST00000569273 224 ntBASIC-0.24□□□□□ -2.45
SCN1AP35498 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.25□□□□□ -2.45
SCN1AP35498 MIR519A1-201ENST00000385257 85 ntBASIC-0.25□□□□□ -2.45
SCN1AP35498 AL162726.3-218ENST00000636401 95 ntBASIC-0.25□□□□□ -2.45
SCN1AP35498 MIR371B-201ENST00000638082 66 ntBASIC-0.25□□□□□ -2.45
SCN1AP35498 SNORD114-31-201ENST00000363219 75 ntBASIC-0.25□□□□□ -2.45
SCN1AP35498 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.25□□□□□ -2.45
SCN1AP35498 SNORD114-15-201ENST00000364687 72 ntBASIC-0.25□□□□□ -2.45
SCN1AP35498 RNU6V-201ENST00000384105 107 ntBASIC-0.25□□□□□ -2.45
SCN1AP35498 RNU6-850P-201ENST00000516934 103 ntBASIC-0.25□□□□□ -2.45
SCN1AP35498 SNORA81.3-201ENST00000517283 198 ntBASIC-0.25□□□□□ -2.45
SCN1AP35498 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.25□□□□□ -2.45
SCN1AP35498 MIR4473-201ENST00000583731 91 ntBASIC-0.25□□□□□ -2.45
SCN1AP35498 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.26□□□□□ -2.45
SCN1AP35498 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.26□□□□□ -2.45
SCN1AP35498 RNY4P3-201ENST00000365254 95 ntBASIC-0.26□□□□□ -2.45
SCN1AP35498 MIR106A-201ENST00000384870 81 ntBASIC-0.26□□□□□ -2.45
SCN1AP35498 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.26□□□□□ -2.45
SCN1AP35498 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.26□□□□□ -2.45
SCN1AP35498 U6.100-201ENST00000636230 99 ntBASIC-0.26□□□□□ -2.45
SCN1AP35498 MIR1255B1-201ENST00000636325 63 ntBASIC-0.26□□□□□ -2.45
SCN1AP35498 AL512310.12-203ENST00000640543 90 ntBASIC-0.26□□□□□ -2.45
SCN1AP35498 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.26□□□□□ -2.45
SCN1AP35498 SNORD2-201ENST00000459163 69 ntBASIC-0.26□□□□□ -2.45
SCN1AP35498 MIR3163-201ENST00000581592 73 ntBASIC-0.26□□□□□ -2.45
SCN1AP35498 MIR3920-201ENST00000581751 86 ntBASIC-0.26□□□□□ -2.45
SCN1AP35498 MIR4503-201ENST00000582187 83 ntBASIC-0.26□□□□□ -2.45
SCN1AP35498 MIR3666-201ENST00000607845 111 ntBASIC-0.26□□□□□ -2.45
SCN1AP35498 MIR20A-201ENST00000362279 71 ntBASIC-0.27□□□□□ -2.45
SCN1AP35498 RNA5SP403-201ENST00000363598 108 ntBASIC-0.27□□□□□ -2.45
SCN1AP35498 MIR216B-201ENST00000390186 82 ntBASIC-0.27□□□□□ -2.45
SCN1AP35498 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.27□□□□□ -2.45
SCN1AP35498 RNU6-664P-201ENST00000362381 107 ntBASIC-0.28□□□□□ -2.45
SCN1AP35498 RNU6-363P-201ENST00000362895 105 ntBASIC-0.28□□□□□ -2.45
SCN1AP35498 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.28□□□□□ -2.45
SCN1AP35498 SNORD37.2-201ENST00000391075 66 ntBASIC-0.28□□□□□ -2.45
SCN1AP35498 RNA5SP300-201ENST00000391197 107 ntBASIC-0.28□□□□□ -2.45
SCN1AP35498 AC074198.2-201ENST00000508153 258 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 312.7 ms