Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 MIR548D2-201ENST00000384955 97 ntBASIC0.35□□□□□ -2.35
COL5A1P20908 MIR548A1-201ENST00000385041 97 ntBASIC0.35□□□□□ -2.35
COL5A1P20908 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.35□□□□□ -2.35
COL5A1P20908 RNU6-789P-201ENST00000517105 102 ntBASIC0.35□□□□□ -2.35
COL5A1P20908 AC007012.1-201ENST00000567192 175 ntBASIC0.35□□□□□ -2.35
COL5A1P20908 MIR3914-2-201ENST00000637339 95 ntBASIC0.35□□□□□ -2.35
COL5A1P20908 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.34□□□□□ -2.35
COL5A1P20908 RNU6-1099P-201ENST00000363533 107 ntBASIC0.34□□□□□ -2.35
COL5A1P20908 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
COL5A1P20908 RNU6-409P-201ENST00000384114 104 ntBASIC0.34□□□□□ -2.35
COL5A1P20908 MIR588-201ENST00000384900 83 ntBASIC0.34□□□□□ -2.35
COL5A1P20908 Y_RNA.588-201ENST00000391254 102 ntBASIC0.34□□□□□ -2.35
COL5A1P20908 MIR938-201ENST00000401216 83 ntBASIC0.34□□□□□ -2.35
COL5A1P20908 Z95118.1-201ENST00000421372 247 ntBASIC0.34□□□□□ -2.35
COL5A1P20908 RNU6-531P-201ENST00000516694 104 ntBASIC0.34□□□□□ -2.35
COL5A1P20908 RNU7-137P-201ENST00000516788 62 ntBASIC0.34□□□□□ -2.35
COL5A1P20908 AC011195.1-201ENST00000578177 177 ntBASIC0.34□□□□□ -2.35
COL5A1P20908 AC008608.1-201ENST00000603910 127 ntBASIC0.34□□□□□ -2.35
COL5A1P20908 MIR6082-201ENST00000613604 109 ntBASIC0.34□□□□□ -2.35
COL5A1P20908 uc_338.16-201ENST00000621804 95 ntBASIC0.34□□□□□ -2.35
COL5A1P20908 Y_RNA.174-201ENST00000363781 105 ntBASIC0.34□□□□□ -2.36
COL5A1P20908 AL157398.1-201ENST00000452981 186 ntBASIC0.34□□□□□ -2.36
COL5A1P20908 RNU6-521P-201ENST00000516663 105 ntBASIC0.34□□□□□ -2.36
COL5A1P20908 SNORA25.16-201ENST00000516741 121 ntBASIC0.34□□□□□ -2.36
COL5A1P20908 RNU6-765P-201ENST00000516916 99 ntBASIC0.34□□□□□ -2.36
COL5A1P20908 Y_RNA.712-201ENST00000517011 92 ntBASIC0.34□□□□□ -2.36
COL5A1P20908 MTND5P40-201ENST00000559945 246 ntBASIC0.34□□□□□ -2.36
COL5A1P20908 AC138869.1-201ENST00000568623 124 ntBASIC0.34□□□□□ -2.36
COL5A1P20908 AC020891.4-201ENST00000605745 93 ntBASIC0.34□□□□□ -2.36
COL5A1P20908 AL136317.1-201ENST00000612653 226 ntBASIC0.34□□□□□ -2.36
COL5A1P20908 MIR18A-201ENST00000362310 71 ntBASIC0.33□□□□□ -2.36
COL5A1P20908 Y_RNA.328-201ENST00000365208 113 ntBASIC0.33□□□□□ -2.36
COL5A1P20908 Y_RNA.448-201ENST00000384185 108 ntBASIC0.33□□□□□ -2.36
COL5A1P20908 SNORD38.2-201ENST00000384470 69 ntBASIC0.33□□□□□ -2.36
COL5A1P20908 AC015818.7-201ENST00000428754 109 ntBASIC0.33□□□□□ -2.36
COL5A1P20908 AC087499.7-201ENST00000441958 109 ntBASIC0.33□□□□□ -2.36
COL5A1P20908 AC067940.1-201ENST00000458411 300 ntBASIC0.33□□□□□ -2.36
COL5A1P20908 TRAJ51-201ENST00000504127 63 ntBASIC0.33□□□□□ -2.36
COL5A1P20908 RNU7-6P-201ENST00000516845 62 ntBASIC0.33□□□□□ -2.36
COL5A1P20908 DEFB131E-201ENST00000532329 154 ntBASIC0.33□□□□□ -2.36
COL5A1P20908 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.33□□□□□ -2.36
COL5A1P20908 Y_RNA.273-201ENST00000364703 102 ntBASIC0.32□□□□□ -2.36
COL5A1P20908 SNORD100-201ENST00000408573 76 ntBASIC0.32□□□□□ -2.36
COL5A1P20908 RNU4-83P-201ENST00000410863 133 ntBASIC0.32□□□□□ -2.36
COL5A1P20908 RNU6-479P-201ENST00000516348 105 ntBASIC0.32□□□□□ -2.36
COL5A1P20908 RNU6-135P-201ENST00000516769 101 ntBASIC0.32□□□□□ -2.36
COL5A1P20908 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.32□□□□□ -2.36
COL5A1P20908 RNU6-90P-201ENST00000606352 106 ntBASIC0.32□□□□□ -2.36
COL5A1P20908 U2.22-201ENST00000636441 106 ntBASIC0.32□□□□□ -2.36
COL5A1P20908 RNU6-1313P-201ENST00000362622 102 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 RNU4-36P-201ENST00000364294 144 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 RNU6-1163P-201ENST00000364516 107 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 RNU6-865P-201ENST00000364772 107 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 SNORD20-201ENST00000384550 80 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 AL158147.1-201ENST00000443970 75 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 Y_RNA.709-201ENST00000516952 92 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 MIR548AI-201ENST00000579940 88 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 MIR5190-201ENST00000581537 80 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 AL162376.1-201ENST00000624117 175 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.31□□□□□ -2.36
COL5A1P20908 SNORD114-15-201ENST00000364687 72 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 RNU4-45P-201ENST00000365469 141 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 RNU6-1056P-201ENST00000383996 107 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 SNORA32-201ENST00000384072 121 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 RNU6-110P-201ENST00000384508 104 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 RNU6-1006P-201ENST00000516998 103 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 MIR5009-201ENST00000578736 100 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 MIR548H5-201ENST00000580314 60 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 MIR4676-201ENST00000583078 72 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 AL353765.1-201ENST00000605514 183 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 RNU7-10P-201ENST00000607194 63 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 AL365222.1-201ENST00000614661 98 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 AP001362.1-201ENST00000625165 124 ntBASIC0.31□□□□□ -2.36
COL5A1P20908 Y_RNA.13-201ENST00000362403 112 ntBASIC0.3□□□□□ -2.36
COL5A1P20908 SNORD36A-201ENST00000362874 73 ntBASIC0.3□□□□□ -2.36
COL5A1P20908 RNU6-509P-201ENST00000363519 107 ntBASIC0.3□□□□□ -2.36
COL5A1P20908 RNU6-726P-201ENST00000364680 107 ntBASIC0.3□□□□□ -2.36
COL5A1P20908 RNU6-476P-201ENST00000384726 107 ntBASIC0.3□□□□□ -2.36
COL5A1P20908 MIR516A2-201ENST00000384888 90 ntBASIC0.3□□□□□ -2.36
COL5A1P20908 MIR516A1-201ENST00000385033 90 ntBASIC0.3□□□□□ -2.36
COL5A1P20908 AC104692.1-201ENST00000472406 90 ntBASIC0.3□□□□□ -2.36
COL5A1P20908 RNU6-469P-201ENST00000516253 101 ntBASIC0.3□□□□□ -2.36
COL5A1P20908 RNU6-589P-201ENST00000516485 107 ntBASIC0.3□□□□□ -2.36
COL5A1P20908 MIR3613-201ENST00000579844 87 ntBASIC0.3□□□□□ -2.36
COL5A1P20908 MIR6755-201ENST00000619993 66 ntBASIC0.3□□□□□ -2.36
COL5A1P20908 AC244669.1-204ENST00000621564 178 ntBASIC0.3□□□□□ -2.36
COL5A1P20908 U6.95-201ENST00000636931 70 ntBASIC0.3□□□□□ -2.36
COL5A1P20908 RNU6-834P-201ENST00000362367 110 ntBASIC0.29□□□□□ -2.36
COL5A1P20908 Y_RNA.119-201ENST00000363301 96 ntBASIC0.29□□□□□ -2.36
COL5A1P20908 RNA5SP368-201ENST00000364298 116 ntBASIC0.29□□□□□ -2.36
COL5A1P20908 SNORD45B-201ENST00000364617 72 ntBASIC0.29□□□□□ -2.36
COL5A1P20908 RNA5SP117-201ENST00000365294 118 ntBASIC0.29□□□□□ -2.36
COL5A1P20908 SNORA36.2-201ENST00000384004 127 ntBASIC0.29□□□□□ -2.36
COL5A1P20908 RNU6-616P-201ENST00000384353 107 ntBASIC0.29□□□□□ -2.36
COL5A1P20908 SNORA72.6-201ENST00000384520 129 ntBASIC0.29□□□□□ -2.36
COL5A1P20908 RNU6-30P-201ENST00000384561 107 ntBASIC0.29□□□□□ -2.36
COL5A1P20908 RNU6-758P-201ENST00000516292 89 ntBASIC0.29□□□□□ -2.36
COL5A1P20908 AC018659.1-201ENST00000551083 169 ntBASIC0.29□□□□□ -2.36
COL5A1P20908 Y_RNA.56-201ENST00000362798 112 ntBASIC0.29□□□□□ -2.36
COL5A1P20908 SNORD18A-201ENST00000363753 72 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms