Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RNU7-137P-201ENST00000516788 62 ntBASIC0.07□□□□□ -2.4
COL11A1P12107 MIR5706-201ENST00000579841 80 ntBASIC0.07□□□□□ -2.4
COL11A1P12107 Y_RNA.773-201ENST00000607168 90 ntBASIC0.07□□□□□ -2.4
COL11A1P12107 AC098479.1-201ENST00000609225 154 ntBASIC0.07□□□□□ -2.4
COL11A1P12107 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.07□□□□□ -2.4
COL11A1P12107 MIR376B-201ENST00000614515 100 ntBASIC0.07□□□□□ -2.4
COL11A1P12107 AP001340.1-201ENST00000624405 217 ntBASIC0.07□□□□□ -2.4
COL11A1P12107 SNORA63.5-201ENST00000363548 123 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 Y_RNA.150-201ENST00000363562 102 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 RNU6-1163P-201ENST00000364516 107 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 Y_RNA.323-201ENST00000365157 109 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 Y_RNA.360-201ENST00000365512 102 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 MIR601-201ENST00000385256 79 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 MIR760-201ENST00000390220 80 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 HMGN2P22-201ENST00000427588 175 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 MTATP6P21-201ENST00000440681 189 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 AC244505.6-201ENST00000452829 130 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 RNA5SP268-201ENST00000516828 124 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 MTND5P40-201ENST00000559945 246 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 MIR548AX-201ENST00000580117 73 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 MIR548AE2-201ENST00000583456 67 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 FTX_2.1-201ENST00000618816 94 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 SNORD114-16-201ENST00000363044 70 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 Y_RNA.328-201ENST00000365208 113 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 RNU4-11P-201ENST00000365287 132 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 Y_RNA.346-201ENST00000365385 112 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 Y_RNA.528-201ENST00000384575 108 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 SNORD37.2-201ENST00000391075 66 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 MIR548I2-201ENST00000408348 149 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 RNU6-426P-201ENST00000516464 97 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 RNU6-1234P-201ENST00000516877 103 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 MIR8066-201ENST00000617280 78 ntBASIC0.06□□□□□ -2.4
COL11A1P12107 MIRLET7D-201ENST00000362263 87 ntBASIC0.05□□□□□ -2.4
COL11A1P12107 SNORD36A-201ENST00000362874 73 ntBASIC0.05□□□□□ -2.4
COL11A1P12107 RNU6-1184P-201ENST00000384588 108 ntBASIC0.05□□□□□ -2.4
COL11A1P12107 MIR516A2-201ENST00000384888 90 ntBASIC0.05□□□□□ -2.4
COL11A1P12107 MIR617-201ENST00000385030 97 ntBASIC0.05□□□□□ -2.4
COL11A1P12107 MIR516A1-201ENST00000385033 90 ntBASIC0.05□□□□□ -2.4
COL11A1P12107 MIR892B-201ENST00000401279 77 ntBASIC0.05□□□□□ -2.4
COL11A1P12107 MIR548H2-201ENST00000408874 88 ntBASIC0.05□□□□□ -2.4
COL11A1P12107 RNU6-1265P-201ENST00000516342 103 ntBASIC0.05□□□□□ -2.4
COL11A1P12107 Y_RNA.198-201ENST00000364013 98 ntBASIC0.04□□□□□ -2.4
COL11A1P12107 RNU6-1130P-201ENST00000365434 107 ntBASIC0.04□□□□□ -2.4
COL11A1P12107 Y_RNA.420-201ENST00000384043 110 ntBASIC0.04□□□□□ -2.4
COL11A1P12107 Y_RNA.448-201ENST00000384185 108 ntBASIC0.04□□□□□ -2.4
COL11A1P12107 MIR610-201ENST00000385139 96 ntBASIC0.04□□□□□ -2.4
COL11A1P12107 SNORD41.1-201ENST00000391000 69 ntBASIC0.04□□□□□ -2.4
COL11A1P12107 SNORD77B-201ENST00000391112 67 ntBASIC0.04□□□□□ -2.4
COL11A1P12107 RNU6-782P-201ENST00000516852 104 ntBASIC0.04□□□□□ -2.4
COL11A1P12107 AC141557.1-201ENST00000540982 400 ntBASIC0.04□□□□□ -2.4
COL11A1P12107 MIR4645-201ENST00000583158 77 ntBASIC0.04□□□□□ -2.4
COL11A1P12107 AL442128.1-201ENST00000615151 90 ntBASIC0.04□□□□□ -2.4
COL11A1P12107 AP001362.1-201ENST00000625165 124 ntBASIC0.04□□□□□ -2.4
COL11A1P12107 AL512310.12-203ENST00000640543 90 ntBASIC0.04□□□□□ -2.4
COL11A1P12107 RNU6-1260P-201ENST00000362944 107 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 RNU6-815P-201ENST00000384080 113 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 Y_RNA.630-201ENST00000411370 108 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 AC097635.1-201ENST00000450678 155 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 SCARNA16.5-201ENST00000517114 183 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 MTND5P41-201ENST00000517498 206 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.03□□□□□ -2.4
COL11A1P12107 MIR548AD-201ENST00000584780 82 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 uc_338.28-201ENST00000612082 187 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 TUG1_4.1-201ENST00000619464 181 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 uc_338.10-201ENST00000621872 182 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 MIR1255B1-201ENST00000636325 63 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 RNU6-363P-201ENST00000362895 105 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 Y_RNA.125-201ENST00000363371 111 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 Y_RNA.127-201ENST00000363386 109 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 Y_RNA.213-201ENST00000364178 111 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 Y_RNA.270-201ENST00000364693 104 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 RNU6-915P-201ENST00000364943 103 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 Y_RNA.342-201ENST00000365352 113 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 Y_RNA.344-201ENST00000365381 112 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 RNU6-46P-201ENST00000383860 107 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 SNORA32-201ENST00000384072 121 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 MIR577-201ENST00000385196 96 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 RNU6-1211P-201ENST00000459179 105 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 RPL39P34-201ENST00000477141 156 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 RNA5SP272-201ENST00000516095 111 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 RNY1P9-201ENST00000532431 109 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 MIR548X2-201ENST00000579776 100 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 RNU6-90P-201ENST00000606352 106 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 RNU1-29P-201ENST00000606574 126 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 U7.2-201ENST00000607576 63 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 MIR7107-201ENST00000611489 80 ntBASIC0.03□□□□□ -2.4
COL11A1P12107 RNU6-664P-201ENST00000362381 107 ntBASIC0.02□□□□□ -2.41
COL11A1P12107 Y_RNA.114-201ENST00000363265 113 ntBASIC0.02□□□□□ -2.41
COL11A1P12107 RNY4P6-201ENST00000363667 96 ntBASIC0.02□□□□□ -2.41
COL11A1P12107 SNORD116-18-201ENST00000383961 92 ntBASIC0.02□□□□□ -2.41
COL11A1P12107 SNORD38.2-201ENST00000384470 69 ntBASIC0.02□□□□□ -2.41
COL11A1P12107 MIR593-201ENST00000384856 100 ntBASIC0.02□□□□□ -2.41
COL11A1P12107 MIR214-201ENST00000385214 110 ntBASIC0.02□□□□□ -2.41
COL11A1P12107 Y_RNA.596-201ENST00000410462 109 ntBASIC0.02□□□□□ -2.41
COL11A1P12107 SNORD63B-201ENST00000411005 70 ntBASIC0.02□□□□□ -2.41
COL11A1P12107 SNX3P1X-201ENST00000414887 175 ntBASIC0.02□□□□□ -2.41
COL11A1P12107 Y_RNA.660-201ENST00000516002 120 ntBASIC0.02□□□□□ -2.41
COL11A1P12107 RNU6-521P-201ENST00000516663 105 ntBASIC0.02□□□□□ -2.41
COL11A1P12107 MIR3163-201ENST00000581592 73 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms