Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 Y_RNA.377-201ENST00000365644 108 ntBASIC0.62□□□□□ -2.31
PF4V1P10720 SNORA8.2-201ENST00000384372 139 ntBASIC0.62□□□□□ -2.31
PF4V1P10720 Y_RNA.549-201ENST00000384657 102 ntBASIC0.62□□□□□ -2.31
PF4V1P10720 TRAJ51-201ENST00000504127 63 ntBASIC0.62□□□□□ -2.31
PF4V1P10720 RNU6-412P-201ENST00000516434 106 ntBASIC0.62□□□□□ -2.31
PF4V1P10720 RNU6-850P-201ENST00000516934 103 ntBASIC0.62□□□□□ -2.31
PF4V1P10720 AC068339.1-201ENST00000526965 141 ntBASIC0.62□□□□□ -2.31
PF4V1P10720 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.62□□□□□ -2.31
PF4V1P10720 PVT1_3.1-201ENST00000620853 95 ntBASIC0.62□□□□□ -2.31
PF4V1P10720 MIR6835-201ENST00000621552 64 ntBASIC0.62□□□□□ -2.31
PF4V1P10720 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
PF4V1P10720 SNORA36.1-201ENST00000363424 132 ntBASIC0.61□□□□□ -2.31
PF4V1P10720 Y_RNA.281-201ENST00000364774 94 ntBASIC0.61□□□□□ -2.31
PF4V1P10720 SNORD116-21-201ENST00000384507 92 ntBASIC0.61□□□□□ -2.31
PF4V1P10720 MIR216A-201ENST00000385063 110 ntBASIC0.61□□□□□ -2.31
PF4V1P10720 RNU6-351P-201ENST00000516097 100 ntBASIC0.61□□□□□ -2.31
PF4V1P10720 RNA5SP268-201ENST00000516828 124 ntBASIC0.61□□□□□ -2.31
PF4V1P10720 MIR4694-201ENST00000578534 80 ntBASIC0.61□□□□□ -2.31
PF4V1P10720 AC096720.1-201ENST00000604441 183 ntBASIC0.61□□□□□ -2.31
PF4V1P10720 AC244669.1-204ENST00000621564 178 ntBASIC0.61□□□□□ -2.31
PF4V1P10720 SNORD115-24-201ENST00000363528 82 ntBASIC0.6□□□□□ -2.31
PF4V1P10720 Y_RNA.342-201ENST00000365352 113 ntBASIC0.6□□□□□ -2.31
PF4V1P10720 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
PF4V1P10720 MIR518A1-201ENST00000385068 85 ntBASIC0.6□□□□□ -2.31
PF4V1P10720 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.6□□□□□ -2.31
PF4V1P10720 MIR548G-201ENST00000408442 89 ntBASIC0.6□□□□□ -2.31
PF4V1P10720 SNORD63B-201ENST00000411005 70 ntBASIC0.6□□□□□ -2.31
PF4V1P10720 RNU6-313P-201ENST00000516317 112 ntBASIC0.6□□□□□ -2.31
PF4V1P10720 MIR4714-201ENST00000580728 77 ntBASIC0.6□□□□□ -2.31
PF4V1P10720 RNU6-90P-201ENST00000606352 106 ntBASIC0.6□□□□□ -2.31
PF4V1P10720 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.6□□□□□ -2.31
PF4V1P10720 AC091304.10-201ENST00000641554 121 ntBASIC0.6□□□□□ -2.31
PF4V1P10720 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
PF4V1P10720 RNU6-834P-201ENST00000362367 110 ntBASIC0.59□□□□□ -2.31
PF4V1P10720 SNORD114-26-201ENST00000363543 72 ntBASIC0.59□□□□□ -2.31
PF4V1P10720 U8.6-201ENST00000364939 135 ntBASIC0.59□□□□□ -2.31
PF4V1P10720 MIR599-201ENST00000385069 95 ntBASIC0.59□□□□□ -2.31
PF4V1P10720 RNU6-1154P-201ENST00000391001 104 ntBASIC0.59□□□□□ -2.31
PF4V1P10720 RNU4-61P-201ENST00000411243 107 ntBASIC0.59□□□□□ -2.31
PF4V1P10720 SPINT5P-201ENST00000448174 155 ntBASIC0.59□□□□□ -2.31
PF4V1P10720 MIR5009-201ENST00000578736 100 ntBASIC0.59□□□□□ -2.31
PF4V1P10720 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.59□□□□□ -2.31
PF4V1P10720 SNORD118-201ENST00000363593 134 ntBASIC0.58□□□□□ -2.32
PF4V1P10720 RNU6-1144P-201ENST00000384247 104 ntBASIC0.58□□□□□ -2.32
PF4V1P10720 RNY1P4-201ENST00000384595 115 ntBASIC0.58□□□□□ -2.32
PF4V1P10720 RNU6-476P-201ENST00000384726 107 ntBASIC0.58□□□□□ -2.32
PF4V1P10720 RNA5SP227-201ENST00000516184 113 ntBASIC0.58□□□□□ -2.32
PF4V1P10720 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
PF4V1P10720 Y_RNA.35-201ENST00000362601 101 ntBASIC0.57□□□□□ -2.32
PF4V1P10720 RNU6-1064P-201ENST00000410626 104 ntBASIC0.57□□□□□ -2.32
PF4V1P10720 RNA5SP436-201ENST00000516020 115 ntBASIC0.57□□□□□ -2.32
PF4V1P10720 RN7SL793P-201ENST00000583259 296 ntBASIC0.57□□□□□ -2.32
PF4V1P10720 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
PF4V1P10720 RNY3P2-201ENST00000362918 102 ntBASIC0.56□□□□□ -2.32
PF4V1P10720 Y_RNA.247-201ENST00000364500 92 ntBASIC0.56□□□□□ -2.32
PF4V1P10720 Y_RNA.323-201ENST00000365157 109 ntBASIC0.56□□□□□ -2.32
PF4V1P10720 MIR577-201ENST00000385196 96 ntBASIC0.56□□□□□ -2.32
PF4V1P10720 RNU2-51P-201ENST00000410708 197 ntBASIC0.56□□□□□ -2.32
PF4V1P10720 AC098934.3-201ENST00000430450 190 ntBASIC0.56□□□□□ -2.32
PF4V1P10720 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.56□□□□□ -2.32
PF4V1P10720 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.56□□□□□ -2.32
PF4V1P10720 Y_RNA.809-201ENST00000516058 95 ntBASIC0.56□□□□□ -2.32
PF4V1P10720 RNU6-406P-201ENST00000516470 107 ntBASIC0.56□□□□□ -2.32
PF4V1P10720 SNORA25.18-201ENST00000607153 114 ntBASIC0.56□□□□□ -2.32
PF4V1P10720 RNU6-1260P-201ENST00000362944 107 ntBASIC0.55□□□□□ -2.32
PF4V1P10720 RNU6-1099P-201ENST00000363533 107 ntBASIC0.55□□□□□ -2.32
PF4V1P10720 Y_RNA.173-201ENST00000363776 113 ntBASIC0.55□□□□□ -2.32
PF4V1P10720 RNU7-195P-201ENST00000458793 62 ntBASIC0.55□□□□□ -2.32
PF4V1P10720 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.55□□□□□ -2.32
PF4V1P10720 RNU6-832P-201ENST00000363319 107 ntBASIC0.54□□□□□ -2.32
PF4V1P10720 RNA5SP403-201ENST00000363598 108 ntBASIC0.54□□□□□ -2.32
PF4V1P10720 RNU6-1056P-201ENST00000383996 107 ntBASIC0.54□□□□□ -2.32
PF4V1P10720 Y_RNA.540-201ENST00000384638 111 ntBASIC0.54□□□□□ -2.32
PF4V1P10720 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.54□□□□□ -2.32
PF4V1P10720 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.54□□□□□ -2.32
PF4V1P10720 SNORA68.3-201ENST00000515906 83 ntBASIC0.54□□□□□ -2.32
PF4V1P10720 RNU6-863P-201ENST00000515989 104 ntBASIC0.54□□□□□ -2.32
PF4V1P10720 MIR7107-201ENST00000611489 80 ntBASIC0.54□□□□□ -2.32
PF4V1P10720 MIR6779-201ENST00000617283 64 ntBASIC0.54□□□□□ -2.32
PF4V1P10720 MIR6513-201ENST00000621188 64 ntBASIC0.54□□□□□ -2.32
PF4V1P10720 RNA5SP347-201ENST00000362445 119 ntBASIC0.53□□□□□ -2.32
PF4V1P10720 RNU7-161P-201ENST00000517289 62 ntBASIC0.53□□□□□ -2.32
PF4V1P10720 MIRLET7D-201ENST00000362263 87 ntBASIC0.52□□□□□ -2.33
PF4V1P10720 RNU6-1107P-201ENST00000364817 104 ntBASIC0.52□□□□□ -2.33
PF4V1P10720 AL606753.1-201ENST00000427435 87 ntBASIC0.52□□□□□ -2.33
PF4V1P10720 AC141557.1-201ENST00000540982 400 ntBASIC0.52□□□□□ -2.33
PF4V1P10720 MIR5087-201ENST00000635826 76 ntBASIC0.52□□□□□ -2.33
PF4V1P10720 Y_RNA.57-201ENST00000362806 113 ntBASIC0.51□□□□□ -2.33
PF4V1P10720 Y_RNA.221-201ENST00000364248 96 ntBASIC0.51□□□□□ -2.33
PF4V1P10720 MIR516A2-201ENST00000384888 90 ntBASIC0.51□□□□□ -2.33
PF4V1P10720 MIR516A1-201ENST00000385033 90 ntBASIC0.51□□□□□ -2.33
PF4V1P10720 RNU6-1254P-201ENST00000391266 104 ntBASIC0.51□□□□□ -2.33
PF4V1P10720 MIR548L-201ENST00000408303 86 ntBASIC0.51□□□□□ -2.33
PF4V1P10720 RNU7-104P-201ENST00000459398 79 ntBASIC0.51□□□□□ -2.33
PF4V1P10720 RNU7-106P-201ENST00000459514 67 ntBASIC0.51□□□□□ -2.33
PF4V1P10720 AC067863.3-201ENST00000624172 122 ntBASIC0.51□□□□□ -2.33
PF4V1P10720 AC090625.1-201ENST00000357130 210 ntBASIC0.5□□□□□ -2.33
PF4V1P10720 Y_RNA.10-201ENST00000362371 110 ntBASIC0.5□□□□□ -2.33
PF4V1P10720 Y_RNA.205-201ENST00000364128 113 ntBASIC0.5□□□□□ -2.33
PF4V1P10720 RNU6-1014P-201ENST00000383940 103 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms