Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 AC015818.7-201ENST00000428754 109 ntBASIC1.39□□□□□ -2.19
ITGB1P05556 AC087499.7-201ENST00000441958 109 ntBASIC1.39□□□□□ -2.19
ITGB1P05556 MIR8066-201ENST00000617280 78 ntBASIC1.39□□□□□ -2.19
ITGB1P05556 RNU6-403P-201ENST00000363163 104 ntBASIC1.38□□□□□ -2.19
ITGB1P05556 SNORD114-27-201ENST00000363766 70 ntBASIC1.38□□□□□ -2.19
ITGB1P05556 RNU1-36P-201ENST00000365130 165 ntBASIC1.38□□□□□ -2.19
ITGB1P05556 SNORA72.6-201ENST00000384520 129 ntBASIC1.38□□□□□ -2.19
ITGB1P05556 MIR7-2-201ENST00000384970 110 ntBASIC1.38□□□□□ -2.19
ITGB1P05556 SNORD83.1-201ENST00000411362 77 ntBASIC1.38□□□□□ -2.19
ITGB1P05556 MIR18B-201ENST00000454574 71 ntBASIC1.38□□□□□ -2.19
ITGB1P05556 Y_RNA.685-201ENST00000516532 108 ntBASIC1.38□□□□□ -2.19
ITGB1P05556 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.38□□□□□ -2.19
ITGB1P05556 AC006160.2-201ENST00000637708 154 ntBASIC1.38□□□□□ -2.19
ITGB1P05556 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
ITGB1P05556 RNU6-571P-201ENST00000384128 107 ntBASIC1.37□□□□□ -2.19
ITGB1P05556 RNU6-939P-201ENST00000384634 107 ntBASIC1.37□□□□□ -2.19
ITGB1P05556 AL161932.1-201ENST00000437408 146 ntBASIC1.37□□□□□ -2.19
ITGB1P05556 RNU7-21P-201ENST00000459430 62 ntBASIC1.37□□□□□ -2.19
ITGB1P05556 RNU7-171P-201ENST00000459581 62 ntBASIC1.37□□□□□ -2.19
ITGB1P05556 AC068338.1-201ENST00000565567 176 ntBASIC1.37□□□□□ -2.19
ITGB1P05556 AC022709.1-201ENST00000615967 87 ntBASIC1.37□□□□□ -2.19
ITGB1P05556 MIR3202-2-201ENST00000635980 79 ntBASIC1.37□□□□□ -2.19
ITGB1P05556 AC023934.1-201ENST00000574529 2389 ntBASIC1.37□□□□□ -2.19
ITGB1P05556 Y_RNA.313-201ENST00000365095 103 ntBASIC1.36□□□□□ -2.19
ITGB1P05556 Y_RNA.426-201ENST00000384068 113 ntBASIC1.36□□□□□ -2.19
ITGB1P05556 Y_RNA.437-201ENST00000384113 113 ntBASIC1.36□□□□□ -2.19
ITGB1P05556 MIR520E-201ENST00000384867 87 ntBASIC1.36□□□□□ -2.19
ITGB1P05556 RNU6-910P-201ENST00000390844 107 ntBASIC1.36□□□□□ -2.19
ITGB1P05556 RNU6-519P-201ENST00000410590 108 ntBASIC1.36□□□□□ -2.19
ITGB1P05556 RNU7-185P-201ENST00000459215 60 ntBASIC1.36□□□□□ -2.19
ITGB1P05556 SNORD79.1-201ENST00000516069 84 ntBASIC1.36□□□□□ -2.19
ITGB1P05556 RNU6-638P-201ENST00000516582 104 ntBASIC1.36□□□□□ -2.19
ITGB1P05556 AC036111.3-201ENST00000526389 112 ntBASIC1.36□□□□□ -2.19
ITGB1P05556 AC019288.1-201ENST00000557918 224 ntBASIC1.36□□□□□ -2.19
ITGB1P05556 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.36□□□□□ -2.19
ITGB1P05556 SNORA25.8-201ENST00000364831 128 ntBASIC1.35□□□□□ -2.19
ITGB1P05556 RNU6-524P-201ENST00000384270 107 ntBASIC1.35□□□□□ -2.19
ITGB1P05556 SNORA80D-201ENST00000384488 135 ntBASIC1.35□□□□□ -2.19
ITGB1P05556 MIR516A2-201ENST00000384888 90 ntBASIC1.35□□□□□ -2.19
ITGB1P05556 MIR516A1-201ENST00000385033 90 ntBASIC1.35□□□□□ -2.19
ITGB1P05556 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.35□□□□□ -2.19
ITGB1P05556 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.35□□□□□ -2.19
ITGB1P05556 AL591704.2-201ENST00000421658 181 ntBASIC1.35□□□□□ -2.19
ITGB1P05556 AC023827.1-201ENST00000569247 97 ntBASIC1.35□□□□□ -2.19
ITGB1P05556 MIR4666B-201ENST00000578142 81 ntBASIC1.35□□□□□ -2.19
ITGB1P05556 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.35□□□□□ -2.19
ITGB1P05556 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
ITGB1P05556 RNU4-58P-201ENST00000363192 141 ntBASIC1.34□□□□□ -2.19
ITGB1P05556 SNORD113.3-201ENST00000364630 78 ntBASIC1.34□□□□□ -2.19
ITGB1P05556 MIR1257-201ENST00000408490 117 ntBASIC1.34□□□□□ -2.19
ITGB1P05556 RNU7-85P-201ENST00000458851 63 ntBASIC1.34□□□□□ -2.19
ITGB1P05556 SNORD4B-201ENST00000459083 72 ntBASIC1.34□□□□□ -2.19
ITGB1P05556 RPS29P1-201ENST00000465274 159 ntBASIC1.34□□□□□ -2.19
ITGB1P05556 Y_RNA.13-201ENST00000362403 112 ntBASIC1.33□□□□□ -2.2
ITGB1P05556 MIR519C-201ENST00000385053 87 ntBASIC1.33□□□□□ -2.2
ITGB1P05556 RNU7-106P-201ENST00000459514 67 ntBASIC1.33□□□□□ -2.2
ITGB1P05556 RNA5SP480-201ENST00000516840 109 ntBASIC1.33□□□□□ -2.2
ITGB1P05556 MIR4771-2-201ENST00000577758 74 ntBASIC1.33□□□□□ -2.2
ITGB1P05556 MIR4771-1-201ENST00000582617 74 ntBASIC1.33□□□□□ -2.2
ITGB1P05556 AC013244.2-201ENST00000603396 103 ntBASIC1.33□□□□□ -2.2
ITGB1P05556 AC106800.4-201ENST00000614905 153 ntBASIC1.33□□□□□ -2.2
ITGB1P05556 MIR6767-201ENST00000637302 66 ntBASIC1.33□□□□□ -2.2
ITGB1P05556 RNU4-32P-201ENST00000363404 141 ntBASIC1.32□□□□□ -2.2
ITGB1P05556 RNU6-934P-201ENST00000365154 107 ntBASIC1.32□□□□□ -2.2
ITGB1P05556 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
ITGB1P05556 SNORD12-201ENST00000391002 90 ntBASIC1.32□□□□□ -2.2
ITGB1P05556 RNU7-90P-201ENST00000459216 62 ntBASIC1.32□□□□□ -2.2
ITGB1P05556 snoU13.11-201ENST00000459219 104 ntBASIC1.32□□□□□ -2.2
ITGB1P05556 RNU7-153P-201ENST00000516455 62 ntBASIC1.32□□□□□ -2.2
ITGB1P05556 RNA5SP395-201ENST00000516567 118 ntBASIC1.32□□□□□ -2.2
ITGB1P05556 SNORD36A-201ENST00000362874 73 ntBASIC1.31□□□□□ -2.2
ITGB1P05556 RNU6-652P-201ENST00000365488 107 ntBASIC1.31□□□□□ -2.2
ITGB1P05556 SNORD111-201ENST00000408139 94 ntBASIC1.31□□□□□ -2.2
ITGB1P05556 RNU7-40P-201ENST00000516397 64 ntBASIC1.31□□□□□ -2.2
ITGB1P05556 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.31□□□□□ -2.2
ITGB1P05556 SNORA70.22-201ENST00000517160 124 ntBASIC1.31□□□□□ -2.2
ITGB1P05556 MIR6082-201ENST00000613604 109 ntBASIC1.31□□□□□ -2.2
ITGB1P05556 MIR6515-201ENST00000619843 57 ntBASIC1.31□□□□□ -2.2
ITGB1P05556 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
ITGB1P05556 RNU6-1254P-201ENST00000391266 104 ntBASIC1.3□□□□□ -2.2
ITGB1P05556 SNORD100-201ENST00000408573 76 ntBASIC1.3□□□□□ -2.2
ITGB1P05556 Y_RNA.607-201ENST00000410597 98 ntBASIC1.3□□□□□ -2.2
ITGB1P05556 SNORD63B-201ENST00000411005 70 ntBASIC1.3□□□□□ -2.2
ITGB1P05556 Y_RNA.648-201ENST00000459455 110 ntBASIC1.3□□□□□ -2.2
ITGB1P05556 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
ITGB1P05556 RNA5SP327-201ENST00000362494 101 ntBASIC1.29□□□□□ -2.2
ITGB1P05556 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
ITGB1P05556 RNU6-243P-201ENST00000391140 107 ntBASIC1.29□□□□□ -2.2
ITGB1P05556 TRAJ51-201ENST00000504127 63 ntBASIC1.29□□□□□ -2.2
ITGB1P05556 AC093729.1-201ENST00000513074 128 ntBASIC1.29□□□□□ -2.2
ITGB1P05556 MIR101-2-201ENST00000362195 79 ntBASIC1.28□□□□□ -2.2
ITGB1P05556 Y_RNA.316-201ENST00000365118 111 ntBASIC1.28□□□□□ -2.2
ITGB1P05556 SNORA25-201ENST00000384384 134 ntBASIC1.28□□□□□ -2.2
ITGB1P05556 Y_RNA.536-201ENST00000384621 113 ntBASIC1.28□□□□□ -2.2
ITGB1P05556 MIR222-201ENST00000384992 110 ntBASIC1.28□□□□□ -2.2
ITGB1P05556 MIR125B2-201ENST00000385128 89 ntBASIC1.28□□□□□ -2.2
ITGB1P05556 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
ITGB1P05556 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.28□□□□□ -2.2
ITGB1P05556 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
ITGB1P05556 MIR548J-201ENST00000408833 112 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 201.7 ms