Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SNORD33.1-201ENST00000516213 88 ntBASIC0.24□□□□□ -2.37
MT-ND1P03886 AL078603.1-201ENST00000603824 313 ntBASIC0.24□□□□□ -2.37
MT-ND1P03886 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.24□□□□□ -2.37
MT-ND1P03886 Y_RNA.85-201ENST00000363014 111 ntBASIC0.23□□□□□ -2.37
MT-ND1P03886 Y_RNA.155-201ENST00000363632 101 ntBASIC0.23□□□□□ -2.37
MT-ND1P03886 Y_RNA.224-201ENST00000364308 111 ntBASIC0.23□□□□□ -2.37
MT-ND1P03886 VTRNA1-3-201ENST00000365645 89 ntBASIC0.23□□□□□ -2.37
MT-ND1P03886 MIR516A2-201ENST00000384888 90 ntBASIC0.23□□□□□ -2.37
MT-ND1P03886 MIR516A1-201ENST00000385033 90 ntBASIC0.23□□□□□ -2.37
MT-ND1P03886 MIR519A1-201ENST00000385257 85 ntBASIC0.23□□□□□ -2.37
MT-ND1P03886 MIR936-201ENST00000401264 98 ntBASIC0.23□□□□□ -2.37
MT-ND1P03886 AC097635.1-201ENST00000450678 155 ntBASIC0.23□□□□□ -2.37
MT-ND1P03886 RNU7-104P-201ENST00000459398 79 ntBASIC0.23□□□□□ -2.37
MT-ND1P03886 RNU6-1018P-201ENST00000516577 106 ntBASIC0.23□□□□□ -2.37
MT-ND1P03886 AL162726.3-218ENST00000636401 95 ntBASIC0.23□□□□□ -2.37
MT-ND1P03886 RNA5SP62-201ENST00000363457 110 ntBASIC0.22□□□□□ -2.37
MT-ND1P03886 Y_RNA.342-201ENST00000365352 113 ntBASIC0.22□□□□□ -2.37
MT-ND1P03886 Y_RNA.423-201ENST00000384057 113 ntBASIC0.22□□□□□ -2.37
MT-ND1P03886 RNU6-1201P-201ENST00000384227 107 ntBASIC0.22□□□□□ -2.37
MT-ND1P03886 MIR548A1-201ENST00000385041 97 ntBASIC0.22□□□□□ -2.37
MT-ND1P03886 RNA5SP193-201ENST00000410353 107 ntBASIC0.22□□□□□ -2.37
MT-ND1P03886 Y_RNA.649-201ENST00000459077 103 ntBASIC0.22□□□□□ -2.37
MT-ND1P03886 Y_RNA.809-201ENST00000516058 95 ntBASIC0.22□□□□□ -2.37
MT-ND1P03886 RNA5SP220-201ENST00000516298 104 ntBASIC0.22□□□□□ -2.37
MT-ND1P03886 RNU6-1232P-201ENST00000516299 86 ntBASIC0.22□□□□□ -2.37
MT-ND1P03886 MTND5P40-201ENST00000559945 246 ntBASIC0.22□□□□□ -2.37
MT-ND1P03886 AC007012.1-201ENST00000567192 175 ntBASIC0.22□□□□□ -2.37
MT-ND1P03886 MIR4679-2-201ENST00000578358 77 ntBASIC0.22□□□□□ -2.37
MT-ND1P03886 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.22□□□□□ -2.37
MT-ND1P03886 Y_RNA.507-201ENST00000384500 99 ntBASIC0.21□□□□□ -2.38
MT-ND1P03886 MIR548M-201ENST00000408260 86 ntBASIC0.21□□□□□ -2.38
MT-ND1P03886 RPL39P34-201ENST00000477141 156 ntBASIC0.21□□□□□ -2.38
MT-ND1P03886 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
MT-ND1P03886 AL162376.1-201ENST00000624117 175 ntBASIC0.21□□□□□ -2.38
MT-ND1P03886 AC067863.3-201ENST00000624172 122 ntBASIC0.21□□□□□ -2.38
MT-ND1P03886 RNU6-1260P-201ENST00000362944 107 ntBASIC0.2□□□□□ -2.38
MT-ND1P03886 Y_RNA.173-201ENST00000363776 113 ntBASIC0.2□□□□□ -2.38
MT-ND1P03886 SNORD38.1-201ENST00000363863 68 ntBASIC0.2□□□□□ -2.38
MT-ND1P03886 SNORD116-14-201ENST00000383894 92 ntBASIC0.2□□□□□ -2.38
MT-ND1P03886 SNORD116-17-201ENST00000383929 92 ntBASIC0.2□□□□□ -2.38
MT-ND1P03886 RNU6-524P-201ENST00000384270 107 ntBASIC0.2□□□□□ -2.38
MT-ND1P03886 SNORD116-15-201ENST00000384445 92 ntBASIC0.2□□□□□ -2.38
MT-ND1P03886 SNORD116-19-201ENST00000384729 92 ntBASIC0.2□□□□□ -2.38
MT-ND1P03886 MIR577-201ENST00000385196 96 ntBASIC0.2□□□□□ -2.38
MT-ND1P03886 SNORD41.1-201ENST00000391000 69 ntBASIC0.2□□□□□ -2.38
MT-ND1P03886 MIR548G-201ENST00000408442 89 ntBASIC0.2□□□□□ -2.38
MT-ND1P03886 SPINT5P-201ENST00000448174 155 ntBASIC0.2□□□□□ -2.38
MT-ND1P03886 AC069113.3-201ENST00000521019 150 ntBASIC0.2□□□□□ -2.38
MT-ND1P03886 AL442128.1-201ENST00000615151 90 ntBASIC0.2□□□□□ -2.38
MT-ND1P03886 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
MT-ND1P03886 Y_RNA.353-201ENST00000365440 108 ntBASIC0.19□□□□□ -2.38
MT-ND1P03886 RNU6-81P-201ENST00000365608 104 ntBASIC0.19□□□□□ -2.38
MT-ND1P03886 SNORD38.2-201ENST00000384470 69 ntBASIC0.19□□□□□ -2.38
MT-ND1P03886 RNU6-959P-201ENST00000384671 107 ntBASIC0.19□□□□□ -2.38
MT-ND1P03886 RNU6-269P-201ENST00000391077 97 ntBASIC0.19□□□□□ -2.38
MT-ND1P03886 MIR1912-201ENST00000410389 80 ntBASIC0.19□□□□□ -2.38
MT-ND1P03886 AC073261.1-201ENST00000429409 121 ntBASIC0.19□□□□□ -2.38
MT-ND1P03886 RNU6-1333P-201ENST00000516162 93 ntBASIC0.19□□□□□ -2.38
MT-ND1P03886 MIR3613-201ENST00000579844 87 ntBASIC0.19□□□□□ -2.38
MT-ND1P03886 RNU6-90P-201ENST00000606352 106 ntBASIC0.19□□□□□ -2.38
MT-ND1P03886 SNORD36A-201ENST00000362874 73 ntBASIC0.18□□□□□ -2.38
MT-ND1P03886 Y_RNA.261-201ENST00000364631 102 ntBASIC0.18□□□□□ -2.38
MT-ND1P03886 Y_RNA.323-201ENST00000365157 109 ntBASIC0.18□□□□□ -2.38
MT-ND1P03886 MIR548L-201ENST00000408303 86 ntBASIC0.18□□□□□ -2.38
MT-ND1P03886 MIR3920-201ENST00000581751 86 ntBASIC0.18□□□□□ -2.38
MT-ND1P03886 SNORA70.25-201ENST00000612741 95 ntBASIC0.18□□□□□ -2.38
MT-ND1P03886 MIR548A3-201ENST00000385297 97 ntBASIC0.17□□□□□ -2.38
MT-ND1P03886 RNU6-1265P-201ENST00000516342 103 ntBASIC0.17□□□□□ -2.38
MT-ND1P03886 AC068339.1-201ENST00000526965 141 ntBASIC0.17□□□□□ -2.38
MT-ND1P03886 U6.95-201ENST00000636931 70 ntBASIC0.17□□□□□ -2.38
MT-ND1P03886 Y_RNA.57-201ENST00000362806 113 ntBASIC0.16□□□□□ -2.38
MT-ND1P03886 RNU6-1163P-201ENST00000364516 107 ntBASIC0.16□□□□□ -2.38
MT-ND1P03886 U8.6-201ENST00000364939 135 ntBASIC0.16□□□□□ -2.38
MT-ND1P03886 Y_RNA.309-201ENST00000365046 111 ntBASIC0.16□□□□□ -2.38
MT-ND1P03886 Y_RNA.563-201ENST00000384707 108 ntBASIC0.16□□□□□ -2.38
MT-ND1P03886 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
MT-ND1P03886 AL161932.1-201ENST00000437408 146 ntBASIC0.16□□□□□ -2.38
MT-ND1P03886 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.16□□□□□ -2.38
MT-ND1P03886 AL365222.1-201ENST00000614661 98 ntBASIC0.16□□□□□ -2.38
MT-ND1P03886 RNU6-1099P-201ENST00000363533 107 ntBASIC0.15□□□□□ -2.39
MT-ND1P03886 Y_RNA.377-201ENST00000365644 108 ntBASIC0.15□□□□□ -2.39
MT-ND1P03886 SNORA2A-201ENST00000383885 135 ntBASIC0.15□□□□□ -2.39
MT-ND1P03886 MIR760-201ENST00000390220 80 ntBASIC0.15□□□□□ -2.39
MT-ND1P03886 RNU6-1254P-201ENST00000391266 104 ntBASIC0.15□□□□□ -2.39
MT-ND1P03886 MIR4694-201ENST00000578534 80 ntBASIC0.15□□□□□ -2.39
MT-ND1P03886 MIR5009-201ENST00000578736 100 ntBASIC0.15□□□□□ -2.39
MT-ND1P03886 MIR548AG2-201ENST00000581228 64 ntBASIC0.15□□□□□ -2.39
MT-ND1P03886 AL670379.3-201ENST00000605040 251 ntBASIC0.15□□□□□ -2.39
MT-ND1P03886 RNU6-848P-201ENST00000515948 107 ntBASIC0.14□□□□□ -2.39
MT-ND1P03886 RNU6-617P-201ENST00000516147 107 ntBASIC0.14□□□□□ -2.39
MT-ND1P03886 RNU6-473P-201ENST00000516164 107 ntBASIC0.14□□□□□ -2.39
MT-ND1P03886 RNU7-13P-201ENST00000516413 62 ntBASIC0.14□□□□□ -2.39
MT-ND1P03886 RNU6-1049P-201ENST00000516414 107 ntBASIC0.14□□□□□ -2.39
MT-ND1P03886 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
MT-ND1P03886 MIR6734-201ENST00000621166 68 ntBASIC0.14□□□□□ -2.39
MT-ND1P03886 MIR499B-201ENST00000636498 73 ntBASIC0.14□□□□□ -2.39
MT-ND1P03886 MIR4315-1-201ENST00000636800 73 ntBASIC0.14□□□□□ -2.39
MT-ND1P03886 MIR4315-2-201ENST00000640925 73 ntBASIC0.14□□□□□ -2.39
MT-ND1P03886 SNORA9.1-201ENST00000362412 131 ntBASIC0.13□□□□□ -2.39
MT-ND1P03886 RNU6-832P-201ENST00000363319 107 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 259.4 ms