Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RNU6-972P-201ENST00000391208 107 ntBASIC1□□□□□ -2.25
LDLRP01130 RNU7-62P-201ENST00000458856 62 ntBASIC1□□□□□ -2.25
LDLRP01130 snoU13.21-201ENST00000459368 105 ntBASIC1□□□□□ -2.25
LDLRP01130 RNU6-267P-201ENST00000516714 103 ntBASIC1□□□□□ -2.25
LDLRP01130 AC012676.2-201ENST00000619258 186 ntBASIC1□□□□□ -2.25
LDLRP01130 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1□□□□□ -2.25
LDLRP01130 AP001362.1-201ENST00000625165 124 ntBASIC1□□□□□ -2.25
LDLRP01130 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
LDLRP01130 RNU6-219P-201ENST00000364728 107 ntBASIC0.99□□□□□ -2.25
LDLRP01130 RNU6-1134P-201ENST00000365156 101 ntBASIC0.99□□□□□ -2.25
LDLRP01130 RNU6-675P-201ENST00000384236 104 ntBASIC0.99□□□□□ -2.25
LDLRP01130 SNORA2B-201ENST00000384583 137 ntBASIC0.99□□□□□ -2.25
LDLRP01130 SNORD124-201ENST00000459577 104 ntBASIC0.99□□□□□ -2.25
LDLRP01130 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.99□□□□□ -2.25
LDLRP01130 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.99□□□□□ -2.25
LDLRP01130 RNU6-90P-201ENST00000606352 106 ntBASIC0.99□□□□□ -2.25
LDLRP01130 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
LDLRP01130 RNU1-124P-201ENST00000363861 145 ntBASIC0.98□□□□□ -2.25
LDLRP01130 RNU6-497P-201ENST00000365316 104 ntBASIC0.98□□□□□ -2.25
LDLRP01130 RNU6-820P-201ENST00000384273 107 ntBASIC0.98□□□□□ -2.25
LDLRP01130 MIR181B2-201ENST00000385004 89 ntBASIC0.98□□□□□ -2.25
LDLRP01130 RNU6-402P-201ENST00000410678 103 ntBASIC0.98□□□□□ -2.25
LDLRP01130 RNU4-83P-201ENST00000410863 133 ntBASIC0.98□□□□□ -2.25
LDLRP01130 SPINT5P-201ENST00000448174 155 ntBASIC0.98□□□□□ -2.25
LDLRP01130 AC133485.1-201ENST00000567176 124 ntBASIC0.98□□□□□ -2.25
LDLRP01130 AC090897.1-201ENST00000580909 226 ntBASIC0.98□□□□□ -2.25
LDLRP01130 Y_RNA.73-201ENST00000362910 113 ntBASIC0.97□□□□□ -2.25
LDLRP01130 Y_RNA.119-201ENST00000363301 96 ntBASIC0.97□□□□□ -2.25
LDLRP01130 RNA5SP133-201ENST00000363368 119 ntBASIC0.97□□□□□ -2.25
LDLRP01130 SNORD116-10-201ENST00000363791 102 ntBASIC0.97□□□□□ -2.25
LDLRP01130 MIR19B1-201ENST00000384829 87 ntBASIC0.97□□□□□ -2.25
LDLRP01130 Y_RNA.588-201ENST00000391254 102 ntBASIC0.97□□□□□ -2.25
LDLRP01130 SNRPGP12-201ENST00000449481 213 ntBASIC0.97□□□□□ -2.25
LDLRP01130 MIR4491-201ENST00000581087 68 ntBASIC0.97□□□□□ -2.25
LDLRP01130 AC025521.1-201ENST00000621624 286 ntBASIC0.97□□□□□ -2.25
LDLRP01130 U6.109-201ENST00000636749 87 ntBASIC0.97□□□□□ -2.25
LDLRP01130 Y_RNA.96-201ENST00000363092 109 ntBASIC0.96□□□□□ -2.26
LDLRP01130 Y_RNA.620-201ENST00000411009 88 ntBASIC0.96□□□□□ -2.26
LDLRP01130 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.96□□□□□ -2.26
LDLRP01130 AC036111.3-201ENST00000526389 112 ntBASIC0.96□□□□□ -2.26
LDLRP01130 MTND5P40-201ENST00000559945 246 ntBASIC0.96□□□□□ -2.26
LDLRP01130 CYP3A137P-201ENST00000562436 69 ntBASIC0.96□□□□□ -2.26
LDLRP01130 AL513043.2-201ENST00000573941 143 ntBASIC0.96□□□□□ -2.26
LDLRP01130 MIR4500-201ENST00000579472 76 ntBASIC0.96□□□□□ -2.26
LDLRP01130 MIR4668-201ENST00000582284 70 ntBASIC0.96□□□□□ -2.26
LDLRP01130 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
LDLRP01130 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.96□□□□□ -2.26
LDLRP01130 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.96□□□□□ -2.26
LDLRP01130 SNORD116-22-201ENST00000384430 92 ntBASIC0.95□□□□□ -2.26
LDLRP01130 MT-TF-201ENST00000387314 71 ntBASIC0.95□□□□□ -2.26
LDLRP01130 MIR942-201ENST00000401111 86 ntBASIC0.95□□□□□ -2.26
LDLRP01130 BX276092.1-201ENST00000427368 251 ntBASIC0.95□□□□□ -2.26
LDLRP01130 AC015818.7-201ENST00000428754 109 ntBASIC0.95□□□□□ -2.26
LDLRP01130 AC087499.7-201ENST00000441958 109 ntBASIC0.95□□□□□ -2.26
LDLRP01130 SNORA25.16-201ENST00000516741 121 ntBASIC0.95□□□□□ -2.26
LDLRP01130 MIR1245B-201ENST00000636115 69 ntBASIC0.95□□□□□ -2.26
LDLRP01130 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
LDLRP01130 SNORD113.3-201ENST00000364630 78 ntBASIC0.94□□□□□ -2.26
LDLRP01130 RNU1-36P-201ENST00000365130 165 ntBASIC0.94□□□□□ -2.26
LDLRP01130 RNU6-979P-201ENST00000383896 107 ntBASIC0.94□□□□□ -2.26
LDLRP01130 RNU6-787P-201ENST00000384032 107 ntBASIC0.94□□□□□ -2.26
LDLRP01130 SNORD38.2-201ENST00000384470 69 ntBASIC0.94□□□□□ -2.26
LDLRP01130 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
LDLRP01130 Y_RNA.609-201ENST00000410669 89 ntBASIC0.94□□□□□ -2.26
LDLRP01130 SNORD83.1-201ENST00000411362 77 ntBASIC0.94□□□□□ -2.26
LDLRP01130 MIR18B-201ENST00000454574 71 ntBASIC0.94□□□□□ -2.26
LDLRP01130 AC022137.1-201ENST00000483735 151 ntBASIC0.94□□□□□ -2.26
LDLRP01130 RNU6-531P-201ENST00000516694 104 ntBASIC0.94□□□□□ -2.26
LDLRP01130 RNU6-850P-201ENST00000516934 103 ntBASIC0.94□□□□□ -2.26
LDLRP01130 RNY1P1-201ENST00000364372 112 ntBASIC0.93□□□□□ -2.26
LDLRP01130 SNORD115-27-201ENST00000364430 82 ntBASIC0.93□□□□□ -2.26
LDLRP01130 RNU6-1275P-201ENST00000391087 107 ntBASIC0.93□□□□□ -2.26
LDLRP01130 RNU6-994P-201ENST00000410507 111 ntBASIC0.93□□□□□ -2.26
LDLRP01130 RNU7-185P-201ENST00000459215 60 ntBASIC0.93□□□□□ -2.26
LDLRP01130 IGLL4P-201ENST00000614590 133 ntBASIC0.93□□□□□ -2.26
LDLRP01130 AC106800.4-201ENST00000614905 153 ntBASIC0.93□□□□□ -2.26
LDLRP01130 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
LDLRP01130 RNU6-369P-201ENST00000362515 102 ntBASIC0.92□□□□□ -2.26
LDLRP01130 Y_RNA.178-201ENST00000363832 102 ntBASIC0.92□□□□□ -2.26
LDLRP01130 SNORD114-24-201ENST00000365029 72 ntBASIC0.92□□□□□ -2.26
LDLRP01130 MIR200A-201ENST00000384875 90 ntBASIC0.92□□□□□ -2.26
LDLRP01130 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.92□□□□□ -2.26
LDLRP01130 SNORD111-201ENST00000408139 94 ntBASIC0.92□□□□□ -2.26
LDLRP01130 SNORD93-201ENST00000408813 74 ntBASIC0.92□□□□□ -2.26
LDLRP01130 RNU7-106P-201ENST00000459514 67 ntBASIC0.92□□□□□ -2.26
LDLRP01130 MIR5588-201ENST00000581890 63 ntBASIC0.92□□□□□ -2.26
LDLRP01130 MIR6857-201ENST00000613267 93 ntBASIC0.92□□□□□ -2.26
LDLRP01130 RNU6-633P-201ENST00000362612 103 ntBASIC0.91□□□□□ -2.26
LDLRP01130 RNU6-1125P-201ENST00000363601 107 ntBASIC0.91□□□□□ -2.26
LDLRP01130 RNU6-571P-201ENST00000384128 107 ntBASIC0.91□□□□□ -2.26
LDLRP01130 RNU6-480P-201ENST00000384332 107 ntBASIC0.91□□□□□ -2.26
LDLRP01130 MIR193B-201ENST00000384907 83 ntBASIC0.91□□□□□ -2.26
LDLRP01130 RNA5SP395-201ENST00000516567 118 ntBASIC0.91□□□□□ -2.26
LDLRP01130 MIR3973-201ENST00000579824 107 ntBASIC0.91□□□□□ -2.26
LDLRP01130 MIR4661-201ENST00000582720 75 ntBASIC0.91□□□□□ -2.26
LDLRP01130 MIR8066-201ENST00000617280 78 ntBASIC0.91□□□□□ -2.26
LDLRP01130 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.91□□□□□ -2.26
LDLRP01130 AC023934.1-201ENST00000574529 2389 ntBASIC0.91□□□□□ -2.26
LDLRP01130 RNU6-228P-201ENST00000362700 106 ntBASIC0.9□□□□□ -2.27
LDLRP01130 SNORD36A-201ENST00000362874 73 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms