Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RNU6-972P-201ENST00000391208 107 ntBASIC1□□□□□ -2.25
LDLRP01130 RNU7-62P-201ENST00000458856 62 ntBASIC1□□□□□ -2.25
LDLRP01130 snoU13.21-201ENST00000459368 105 ntBASIC1□□□□□ -2.25
LDLRP01130 RNU6-267P-201ENST00000516714 103 ntBASIC1□□□□□ -2.25
LDLRP01130 AC012676.2-201ENST00000619258 186 ntBASIC1□□□□□ -2.25
LDLRP01130 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1□□□□□ -2.25
LDLRP01130 AP001362.1-201ENST00000625165 124 ntBASIC1□□□□□ -2.25
LDLRP01130 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
LDLRP01130 RNU6-219P-201ENST00000364728 107 ntBASIC0.99□□□□□ -2.25
LDLRP01130 RNU6-1134P-201ENST00000365156 101 ntBASIC0.99□□□□□ -2.25
LDLRP01130 RNU6-675P-201ENST00000384236 104 ntBASIC0.99□□□□□ -2.25
LDLRP01130 SNORA2B-201ENST00000384583 137 ntBASIC0.99□□□□□ -2.25
LDLRP01130 SNORD124-201ENST00000459577 104 ntBASIC0.99□□□□□ -2.25
LDLRP01130 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.99□□□□□ -2.25
LDLRP01130 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.99□□□□□ -2.25
LDLRP01130 RNU6-90P-201ENST00000606352 106 ntBASIC0.99□□□□□ -2.25
LDLRP01130 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
LDLRP01130 RNU1-124P-201ENST00000363861 145 ntBASIC0.98□□□□□ -2.25
LDLRP01130 RNU6-497P-201ENST00000365316 104 ntBASIC0.98□□□□□ -2.25
LDLRP01130 RNU6-820P-201ENST00000384273 107 ntBASIC0.98□□□□□ -2.25
LDLRP01130 MIR181B2-201ENST00000385004 89 ntBASIC0.98□□□□□ -2.25
LDLRP01130 RNU6-402P-201ENST00000410678 103 ntBASIC0.98□□□□□ -2.25
LDLRP01130 RNU4-83P-201ENST00000410863 133 ntBASIC0.98□□□□□ -2.25
LDLRP01130 SPINT5P-201ENST00000448174 155 ntBASIC0.98□□□□□ -2.25
LDLRP01130 AC133485.1-201ENST00000567176 124 ntBASIC0.98□□□□□ -2.25
LDLRP01130 AC090897.1-201ENST00000580909 226 ntBASIC0.98□□□□□ -2.25
LDLRP01130 Y_RNA.73-201ENST00000362910 113 ntBASIC0.97□□□□□ -2.25
LDLRP01130 Y_RNA.119-201ENST00000363301 96 ntBASIC0.97□□□□□ -2.25
LDLRP01130 RNA5SP133-201ENST00000363368 119 ntBASIC0.97□□□□□ -2.25
LDLRP01130 SNORD116-10-201ENST00000363791 102 ntBASIC0.97□□□□□ -2.25
LDLRP01130 MIR19B1-201ENST00000384829 87 ntBASIC0.97□□□□□ -2.25
LDLRP01130 Y_RNA.588-201ENST00000391254 102 ntBASIC0.97□□□□□ -2.25
LDLRP01130 SNRPGP12-201ENST00000449481 213 ntBASIC0.97□□□□□ -2.25
LDLRP01130 MIR4491-201ENST00000581087 68 ntBASIC0.97□□□□□ -2.25
LDLRP01130 AC025521.1-201ENST00000621624 286 ntBASIC0.97□□□□□ -2.25
LDLRP01130 U6.109-201ENST00000636749 87 ntBASIC0.97□□□□□ -2.25
LDLRP01130 Y_RNA.96-201ENST00000363092 109 ntBASIC0.96□□□□□ -2.26
LDLRP01130 Y_RNA.620-201ENST00000411009 88 ntBASIC0.96□□□□□ -2.26
LDLRP01130 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.96□□□□□ -2.26
LDLRP01130 AC036111.3-201ENST00000526389 112 ntBASIC0.96□□□□□ -2.26
LDLRP01130 MTND5P40-201ENST00000559945 246 ntBASIC0.96□□□□□ -2.26
LDLRP01130 CYP3A137P-201ENST00000562436 69 ntBASIC0.96□□□□□ -2.26
LDLRP01130 AL513043.2-201ENST00000573941 143 ntBASIC0.96□□□□□ -2.26
LDLRP01130 MIR4500-201ENST00000579472 76 ntBASIC0.96□□□□□ -2.26
LDLRP01130 MIR4668-201ENST00000582284 70 ntBASIC0.96□□□□□ -2.26
LDLRP01130 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
LDLRP01130 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.96□□□□□ -2.26
LDLRP01130 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.96□□□□□ -2.26
LDLRP01130 SNORD116-22-201ENST00000384430 92 ntBASIC0.95□□□□□ -2.26
LDLRP01130 MT-TF-201ENST00000387314 71 ntBASIC0.95□□□□□ -2.26
LDLRP01130 MIR942-201ENST00000401111 86 ntBASIC0.95□□□□□ -2.26
LDLRP01130 BX276092.1-201ENST00000427368 251 ntBASIC0.95□□□□□ -2.26
LDLRP01130 AC015818.7-201ENST00000428754 109 ntBASIC0.95□□□□□ -2.26
LDLRP01130 AC087499.7-201ENST00000441958 109 ntBASIC0.95□□□□□ -2.26
LDLRP01130 SNORA25.16-201ENST00000516741 121 ntBASIC0.95□□□□□ -2.26
LDLRP01130 MIR1245B-201ENST00000636115 69 ntBASIC0.95□□□□□ -2.26
LDLRP01130 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
LDLRP01130 SNORD113.3-201ENST00000364630 78 ntBASIC0.94□□□□□ -2.26
LDLRP01130 RNU1-36P-201ENST00000365130 165 ntBASIC0.94□□□□□ -2.26
LDLRP01130 RNU6-979P-201ENST00000383896 107 ntBASIC0.94□□□□□ -2.26
LDLRP01130 RNU6-787P-201ENST00000384032 107 ntBASIC0.94□□□□□ -2.26
LDLRP01130 SNORD38.2-201ENST00000384470 69 ntBASIC0.94□□□□□ -2.26
LDLRP01130 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
LDLRP01130 Y_RNA.609-201ENST00000410669 89 ntBASIC0.94□□□□□ -2.26
LDLRP01130 SNORD83.1-201ENST00000411362 77 ntBASIC0.94□□□□□ -2.26
LDLRP01130 MIR18B-201ENST00000454574 71 ntBASIC0.94□□□□□ -2.26
LDLRP01130 AC022137.1-201ENST00000483735 151 ntBASIC0.94□□□□□ -2.26
LDLRP01130 RNU6-531P-201ENST00000516694 104 ntBASIC0.94□□□□□ -2.26
LDLRP01130 RNU6-850P-201ENST00000516934 103 ntBASIC0.94□□□□□ -2.26
LDLRP01130 RNY1P1-201ENST00000364372 112 ntBASIC0.93□□□□□ -2.26
LDLRP01130 SNORD115-27-201ENST00000364430 82 ntBASIC0.93□□□□□ -2.26
LDLRP01130 RNU6-1275P-201ENST00000391087 107 ntBASIC0.93□□□□□ -2.26
LDLRP01130 RNU6-994P-201ENST00000410507 111 ntBASIC0.93□□□□□ -2.26
LDLRP01130 RNU7-185P-201ENST00000459215 60 ntBASIC0.93□□□□□ -2.26
LDLRP01130 IGLL4P-201ENST00000614590 133 ntBASIC0.93□□□□□ -2.26
LDLRP01130 AC106800.4-201ENST00000614905 153 ntBASIC0.93□□□□□ -2.26
LDLRP01130 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
LDLRP01130 RNU6-369P-201ENST00000362515 102 ntBASIC0.92□□□□□ -2.26
LDLRP01130 Y_RNA.178-201ENST00000363832 102 ntBASIC0.92□□□□□ -2.26
LDLRP01130 SNORD114-24-201ENST00000365029 72 ntBASIC0.92□□□□□ -2.26
LDLRP01130 MIR200A-201ENST00000384875 90 ntBASIC0.92□□□□□ -2.26
LDLRP01130 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.92□□□□□ -2.26
LDLRP01130 SNORD111-201ENST00000408139 94 ntBASIC0.92□□□□□ -2.26
LDLRP01130 SNORD93-201ENST00000408813 74 ntBASIC0.92□□□□□ -2.26
LDLRP01130 RNU7-106P-201ENST00000459514 67 ntBASIC0.92□□□□□ -2.26
LDLRP01130 MIR5588-201ENST00000581890 63 ntBASIC0.92□□□□□ -2.26
LDLRP01130 MIR6857-201ENST00000613267 93 ntBASIC0.92□□□□□ -2.26
LDLRP01130 RNU6-633P-201ENST00000362612 103 ntBASIC0.91□□□□□ -2.26
LDLRP01130 RNU6-1125P-201ENST00000363601 107 ntBASIC0.91□□□□□ -2.26
LDLRP01130 RNU6-571P-201ENST00000384128 107 ntBASIC0.91□□□□□ -2.26
LDLRP01130 RNU6-480P-201ENST00000384332 107 ntBASIC0.91□□□□□ -2.26
LDLRP01130 MIR193B-201ENST00000384907 83 ntBASIC0.91□□□□□ -2.26
LDLRP01130 RNA5SP395-201ENST00000516567 118 ntBASIC0.91□□□□□ -2.26
LDLRP01130 MIR3973-201ENST00000579824 107 ntBASIC0.91□□□□□ -2.26
LDLRP01130 MIR4661-201ENST00000582720 75 ntBASIC0.91□□□□□ -2.26
LDLRP01130 MIR8066-201ENST00000617280 78 ntBASIC0.91□□□□□ -2.26
LDLRP01130 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.91□□□□□ -2.26
LDLRP01130 AC023934.1-201ENST00000574529 2389 ntBASIC0.91□□□□□ -2.26
LDLRP01130 RNU6-228P-201ENST00000362700 106 ntBASIC0.9□□□□□ -2.27
LDLRP01130 SNORD36A-201ENST00000362874 73 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 249.3 ms