Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 MTND5P41-201ENST00000517498 206 ntBASIC-0.04□□□□□ -2.42
CTDNEP1O95476 MIR3920-201ENST00000581751 86 ntBASIC-0.04□□□□□ -2.42
CTDNEP1O95476 MIR548AD-201ENST00000584780 82 ntBASIC-0.04□□□□□ -2.42
CTDNEP1O95476 AL109933.3-201ENST00000619095 188 ntBASIC-0.04□□□□□ -2.42
CTDNEP1O95476 AP001340.1-201ENST00000624405 217 ntBASIC-0.04□□□□□ -2.42
CTDNEP1O95476 RNU6-170P-201ENST00000362832 104 ntBASIC-0.05□□□□□ -2.42
CTDNEP1O95476 SNORD114-16-201ENST00000363044 70 ntBASIC-0.05□□□□□ -2.42
CTDNEP1O95476 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.05□□□□□ -2.42
CTDNEP1O95476 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.05□□□□□ -2.42
CTDNEP1O95476 snosnR66.1-201ENST00000391095 99 ntBASIC-0.05□□□□□ -2.42
CTDNEP1O95476 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.05□□□□□ -2.42
CTDNEP1O95476 RNU6-850P-201ENST00000516934 103 ntBASIC-0.05□□□□□ -2.42
CTDNEP1O95476 MIR5190-201ENST00000581537 80 ntBASIC-0.05□□□□□ -2.42
CTDNEP1O95476 MIR2909-201ENST00000617113 69 ntBASIC-0.05□□□□□ -2.42
CTDNEP1O95476 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.05□□□□□ -2.42
CTDNEP1O95476 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.06□□□□□ -2.42
CTDNEP1O95476 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.06□□□□□ -2.42
CTDNEP1O95476 RNU6-756P-201ENST00000383997 107 ntBASIC-0.06□□□□□ -2.42
CTDNEP1O95476 RNU6-571P-201ENST00000384128 107 ntBASIC-0.06□□□□□ -2.42
CTDNEP1O95476 RNU6-524P-201ENST00000384270 107 ntBASIC-0.06□□□□□ -2.42
CTDNEP1O95476 MIR513C-201ENST00000401352 84 ntBASIC-0.06□□□□□ -2.42
CTDNEP1O95476 MIR1263-201ENST00000408324 86 ntBASIC-0.06□□□□□ -2.42
CTDNEP1O95476 AL353813.1-201ENST00000440700 253 ntBASIC-0.06□□□□□ -2.42
CTDNEP1O95476 RNA5SP484-201ENST00000458857 111 ntBASIC-0.06□□□□□ -2.42
CTDNEP1O95476 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.06□□□□□ -2.42
CTDNEP1O95476 RNU6-781P-201ENST00000516377 101 ntBASIC-0.06□□□□□ -2.42
CTDNEP1O95476 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.06□□□□□ -2.42
CTDNEP1O95476 MIR548X2-201ENST00000579776 100 ntBASIC-0.06□□□□□ -2.42
CTDNEP1O95476 MIR5706-201ENST00000579841 80 ntBASIC-0.06□□□□□ -2.42
CTDNEP1O95476 MIR3163-201ENST00000581592 73 ntBASIC-0.06□□□□□ -2.42
CTDNEP1O95476 MIR4677-201ENST00000584153 80 ntBASIC-0.06□□□□□ -2.42
CTDNEP1O95476 MIR3925-201ENST00000584674 77 ntBASIC-0.06□□□□□ -2.42
CTDNEP1O95476 FTX_2.1-201ENST00000618816 94 ntBASIC-0.06□□□□□ -2.42
CTDNEP1O95476 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.07□□□□□ -2.42
CTDNEP1O95476 RNA5SP457-201ENST00000363657 124 ntBASIC-0.07□□□□□ -2.42
CTDNEP1O95476 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.07□□□□□ -2.42
CTDNEP1O95476 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.07□□□□□ -2.42
CTDNEP1O95476 RNU6-886P-201ENST00000384319 105 ntBASIC-0.07□□□□□ -2.42
CTDNEP1O95476 MIR516A2-201ENST00000384888 90 ntBASIC-0.07□□□□□ -2.42
CTDNEP1O95476 MIR516A1-201ENST00000385033 90 ntBASIC-0.07□□□□□ -2.42
CTDNEP1O95476 MIR610-201ENST00000385139 96 ntBASIC-0.07□□□□□ -2.42
CTDNEP1O95476 HMGN2P22-201ENST00000427588 175 ntBASIC-0.07□□□□□ -2.42
CTDNEP1O95476 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.07□□□□□ -2.42
CTDNEP1O95476 AP001328.1-201ENST00000528550 176 ntBASIC-0.07□□□□□ -2.42
CTDNEP1O95476 MIR548AG2-201ENST00000581228 64 ntBASIC-0.07□□□□□ -2.42
CTDNEP1O95476 MIR371B-201ENST00000638082 66 ntBASIC-0.07□□□□□ -2.42
CTDNEP1O95476 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.08□□□□□ -2.42
CTDNEP1O95476 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.08□□□□□ -2.42
CTDNEP1O95476 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.08□□□□□ -2.42
CTDNEP1O95476 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.08□□□□□ -2.42
CTDNEP1O95476 AL158147.1-201ENST00000443970 75 ntBASIC-0.08□□□□□ -2.42
CTDNEP1O95476 NAMPTP3-201ENST00000569273 224 ntBASIC-0.08□□□□□ -2.42
CTDNEP1O95476 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.09□□□□□ -2.42
CTDNEP1O95476 RNU6-647P-201ENST00000364243 107 ntBASIC-0.09□□□□□ -2.42
CTDNEP1O95476 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.09□□□□□ -2.42
CTDNEP1O95476 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
CTDNEP1O95476 RNU6-182P-201ENST00000516970 105 ntBASIC-0.09□□□□□ -2.42
CTDNEP1O95476 AC073869.9-201ENST00000641610 120 ntBASIC-0.09□□□□□ -2.42
CTDNEP1O95476 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.1□□□□□ -2.43
CTDNEP1O95476 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.1□□□□□ -2.43
CTDNEP1O95476 RNU6-929P-201ENST00000384429 107 ntBASIC-0.1□□□□□ -2.43
CTDNEP1O95476 MIR548D2-201ENST00000384955 97 ntBASIC-0.1□□□□□ -2.43
CTDNEP1O95476 SNORD110-201ENST00000408189 75 ntBASIC-0.1□□□□□ -2.43
CTDNEP1O95476 SNORA7.5-201ENST00000410672 110 ntBASIC-0.1□□□□□ -2.43
CTDNEP1O95476 RNA5SP136-201ENST00000410906 107 ntBASIC-0.1□□□□□ -2.43
CTDNEP1O95476 RNU7-13P-201ENST00000516413 62 ntBASIC-0.1□□□□□ -2.43
CTDNEP1O95476 RNU6-426P-201ENST00000516464 97 ntBASIC-0.1□□□□□ -2.43
CTDNEP1O95476 MTND5P40-201ENST00000559945 246 ntBASIC-0.1□□□□□ -2.43
CTDNEP1O95476 MIR4743-201ENST00000584576 69 ntBASIC-0.1□□□□□ -2.43
CTDNEP1O95476 RNU6-235P-201ENST00000362644 107 ntBASIC-0.11□□□□□ -2.43
CTDNEP1O95476 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.11□□□□□ -2.43
CTDNEP1O95476 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.11□□□□□ -2.43
CTDNEP1O95476 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.11□□□□□ -2.43
CTDNEP1O95476 AC006210.1-201ENST00000424882 111 ntBASIC-0.11□□□□□ -2.43
CTDNEP1O95476 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.11□□□□□ -2.43
CTDNEP1O95476 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.11□□□□□ -2.43
CTDNEP1O95476 AC141557.1-201ENST00000540982 400 ntBASIC-0.11□□□□□ -2.43
CTDNEP1O95476 U7.2-201ENST00000607576 63 ntBASIC-0.11□□□□□ -2.43
CTDNEP1O95476 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.11□□□□□ -2.43
CTDNEP1O95476 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.12□□□□□ -2.43
CTDNEP1O95476 RNU6-652P-201ENST00000365488 107 ntBASIC-0.12□□□□□ -2.43
CTDNEP1O95476 MIR519E-201ENST00000385075 84 ntBASIC-0.12□□□□□ -2.43
CTDNEP1O95476 RNA5SP163-201ENST00000410304 99 ntBASIC-0.12□□□□□ -2.43
CTDNEP1O95476 AL161932.1-201ENST00000437408 146 ntBASIC-0.12□□□□□ -2.43
CTDNEP1O95476 AC093423.1-201ENST00000440817 142 ntBASIC-0.12□□□□□ -2.43
CTDNEP1O95476 RNU7-165P-201ENST00000458864 60 ntBASIC-0.12□□□□□ -2.43
CTDNEP1O95476 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.12□□□□□ -2.43
CTDNEP1O95476 RNU6-363P-201ENST00000362895 105 ntBASIC-0.13□□□□□ -2.43
CTDNEP1O95476 RNU6-509P-201ENST00000363519 107 ntBASIC-0.13□□□□□ -2.43
CTDNEP1O95476 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.13□□□□□ -2.43
CTDNEP1O95476 RNU1-141P-201ENST00000364623 158 ntBASIC-0.13□□□□□ -2.43
CTDNEP1O95476 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.13□□□□□ -2.43
CTDNEP1O95476 RNU6-180P-201ENST00000516697 61 ntBASIC-0.13□□□□□ -2.43
CTDNEP1O95476 U7.6-201ENST00000610841 64 ntBASIC-0.13□□□□□ -2.43
CTDNEP1O95476 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.13□□□□□ -2.43
CTDNEP1O95476 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.13□□□□□ -2.43
CTDNEP1O95476 SNORD36A-201ENST00000362874 73 ntBASIC-0.14□□□□□ -2.43
CTDNEP1O95476 SNORD58C-201ENST00000365223 64 ntBASIC-0.14□□□□□ -2.43
CTDNEP1O95476 MIR892B-201ENST00000401279 77 ntBASIC-0.14□□□□□ -2.43
CTDNEP1O95476 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms