Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 SNORD115-17-201ENST00000364612 82 ntBASIC0.09□□□□□ -2.4
RTN3O95197 Y_RNA.362-201ENST00000365518 110 ntBASIC0.09□□□□□ -2.4
RTN3O95197 Y_RNA.398-201ENST00000383952 99 ntBASIC0.09□□□□□ -2.4
RTN3O95197 RNU6-886P-201ENST00000384319 105 ntBASIC0.09□□□□□ -2.4
RTN3O95197 MIR599-201ENST00000385069 95 ntBASIC0.09□□□□□ -2.4
RTN3O95197 RNA5SP136-201ENST00000410906 107 ntBASIC0.09□□□□□ -2.4
RTN3O95197 RNU7-129P-201ENST00000516128 62 ntBASIC0.09□□□□□ -2.4
RTN3O95197 AC021753.1-201ENST00000635724 168 ntBASIC0.09□□□□□ -2.4
RTN3O95197 Y_RNA.198-201ENST00000364013 98 ntBASIC0.08□□□□□ -2.4
RTN3O95197 RNA5SP128-201ENST00000365305 116 ntBASIC0.08□□□□□ -2.4
RTN3O95197 MIR4752-201ENST00000579672 72 ntBASIC0.08□□□□□ -2.4
RTN3O95197 MIR4768-201ENST00000585270 74 ntBASIC0.08□□□□□ -2.4
RTN3O95197 U7.2-201ENST00000607576 63 ntBASIC0.08□□□□□ -2.4
RTN3O95197 AL162376.1-201ENST00000624117 175 ntBASIC0.08□□□□□ -2.4
RTN3O95197 Y_RNA.150-201ENST00000363562 102 ntBASIC0.07□□□□□ -2.4
RTN3O95197 Y_RNA.215-201ENST00000364204 112 ntBASIC0.07□□□□□ -2.4
RTN3O95197 MIR519A1-201ENST00000385257 85 ntBASIC0.07□□□□□ -2.4
RTN3O95197 RNU1-29P-201ENST00000606574 126 ntBASIC0.07□□□□□ -2.4
RTN3O95197 RNU6-170P-201ENST00000362832 104 ntBASIC0.06□□□□□ -2.4
RTN3O95197 Y_RNA.185-201ENST00000363894 100 ntBASIC0.06□□□□□ -2.4
RTN3O95197 RNY4P3-201ENST00000365254 95 ntBASIC0.06□□□□□ -2.4
RTN3O95197 RNU6-571P-201ENST00000384128 107 ntBASIC0.06□□□□□ -2.4
RTN3O95197 AC108059.2-201ENST00000434626 151 ntBASIC0.06□□□□□ -2.4
RTN3O95197 RNU6-1232P-201ENST00000516299 86 ntBASIC0.06□□□□□ -2.4
RTN3O95197 RNA5SP214-201ENST00000363378 118 ntBASIC0.05□□□□□ -2.4
RTN3O95197 Y_RNA.221-201ENST00000364248 96 ntBASIC0.05□□□□□ -2.4
RTN3O95197 Y_RNA.360-201ENST00000365512 102 ntBASIC0.05□□□□□ -2.4
RTN3O95197 MIR569-201ENST00000385228 96 ntBASIC0.05□□□□□ -2.4
RTN3O95197 MT-TI-201ENST00000387365 69 ntBASIC0.05□□□□□ -2.4
RTN3O95197 SNORD41.1-201ENST00000391000 69 ntBASIC0.05□□□□□ -2.4
RTN3O95197 RNA5SP25-201ENST00000410815 110 ntBASIC0.05□□□□□ -2.4
RTN3O95197 SNORD114-9-201ENST00000364370 72 ntBASIC0.04□□□□□ -2.4
RTN3O95197 SNORD38.2-201ENST00000384470 69 ntBASIC0.04□□□□□ -2.4
RTN3O95197 RNU6-127P-201ENST00000390897 107 ntBASIC0.04□□□□□ -2.4
RTN3O95197 MIR1263-201ENST00000408324 86 ntBASIC0.04□□□□□ -2.4
RTN3O95197 SNORD63B-201ENST00000411005 70 ntBASIC0.04□□□□□ -2.4
RTN3O95197 snoU13.19-201ENST00000459148 104 ntBASIC0.04□□□□□ -2.4
RTN3O95197 RPL39P34-201ENST00000477141 156 ntBASIC0.04□□□□□ -2.4
RTN3O95197 RNU6-521P-201ENST00000516663 105 ntBASIC0.04□□□□□ -2.4
RTN3O95197 AC104408.1-201ENST00000605241 170 ntBASIC0.04□□□□□ -2.4
RTN3O95197 MIR34C-201ENST00000384831 77 ntBASIC0.03□□□□□ -2.4
RTN3O95197 MIR610-201ENST00000385139 96 ntBASIC0.03□□□□□ -2.4
RTN3O95197 Z95118.1-201ENST00000421372 247 ntBASIC0.03□□□□□ -2.4
RTN3O95197 AL158147.1-201ENST00000443970 75 ntBASIC0.03□□□□□ -2.4
RTN3O95197 Y_RNA.809-201ENST00000516058 95 ntBASIC0.03□□□□□ -2.4
RTN3O95197 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
RTN3O95197 MIR5706-201ENST00000579841 80 ntBASIC0.03□□□□□ -2.4
RTN3O95197 Y_RNA.773-201ENST00000607168 90 ntBASIC0.03□□□□□ -2.4
RTN3O95197 MIR371B-201ENST00000638082 66 ntBASIC0.03□□□□□ -2.4
RTN3O95197 AC073869.9-201ENST00000641610 120 ntBASIC0.03□□□□□ -2.4
RTN3O95197 AC090425.1-201ENST00000610007 140 ntBASIC0.02□□□□□ -2.41
RTN3O95197 U7.6-201ENST00000610841 64 ntBASIC0.02□□□□□ -2.41
RTN3O95197 SNORD114-5-201ENST00000362928 70 ntBASIC0.01□□□□□ -2.41
RTN3O95197 Y_RNA.488-201ENST00000384403 102 ntBASIC0.01□□□□□ -2.41
RTN3O95197 Y_RNA.555-201ENST00000384673 110 ntBASIC0.01□□□□□ -2.41
RTN3O95197 MIR643-201ENST00000385267 97 ntBASIC0.01□□□□□ -2.41
RTN3O95197 RNU7-195P-201ENST00000458793 62 ntBASIC0.01□□□□□ -2.41
RTN3O95197 Y_RNA.660-201ENST00000516002 120 ntBASIC0.01□□□□□ -2.41
RTN3O95197 RNU6-758P-201ENST00000516292 89 ntBASIC0.01□□□□□ -2.41
RTN3O95197 RNU6-1265P-201ENST00000516342 103 ntBASIC0.01□□□□□ -2.41
RTN3O95197 MTND5P41-201ENST00000517498 206 ntBASIC0.01□□□□□ -2.41
RTN3O95197 RNU6-1260P-201ENST00000362944 107 ntBASIC0□□□□□ -2.41
RTN3O95197 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
RTN3O95197 RNA5SP98-201ENST00000363158 137 ntBASIC0□□□□□ -2.41
RTN3O95197 SNORD114-31-201ENST00000363219 75 ntBASIC0□□□□□ -2.41
RTN3O95197 MIR548H2-201ENST00000408874 88 ntBASIC0□□□□□ -2.41
RTN3O95197 RNU6-794P-201ENST00000517261 64 ntBASIC0□□□□□ -2.41
RTN3O95197 IGLVI-20-201ENST00000519296 130 ntBASIC0□□□□□ -2.41
RTN3O95197 MIR4493-201ENST00000584016 73 ntBASIC0□□□□□ -2.41
RTN3O95197 MIR499B-201ENST00000636498 73 ntBASIC0□□□□□ -2.41
RTN3O95197 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.01□□□□□ -2.41
RTN3O95197 MIR548D2-201ENST00000384955 97 ntBASIC-0.01□□□□□ -2.41
RTN3O95197 RNU6-850P-201ENST00000516934 103 ntBASIC-0.01□□□□□ -2.41
RTN3O95197 AP001180.6-201ENST00000584918 159 ntBASIC-0.01□□□□□ -2.41
RTN3O95197 AC096720.1-201ENST00000604441 183 ntBASIC-0.01□□□□□ -2.41
RTN3O95197 MIR1255B1-201ENST00000636325 63 ntBASIC-0.01□□□□□ -2.41
RTN3O95197 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.02□□□□□ -2.41
RTN3O95197 RNU6V-201ENST00000384105 107 ntBASIC-0.02□□□□□ -2.41
RTN3O95197 RNU6-269P-201ENST00000391077 97 ntBASIC-0.02□□□□□ -2.41
RTN3O95197 MIR4743-201ENST00000584576 69 ntBASIC-0.02□□□□□ -2.41
RTN3O95197 SNORA70.25-201ENST00000612741 95 ntBASIC-0.02□□□□□ -2.41
RTN3O95197 RNU6-509P-201ENST00000363519 107 ntBASIC-0.03□□□□□ -2.41
RTN3O95197 RNA5SP368-201ENST00000364298 116 ntBASIC-0.03□□□□□ -2.41
RTN3O95197 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.03□□□□□ -2.41
RTN3O95197 RNU6-30P-201ENST00000384561 107 ntBASIC-0.03□□□□□ -2.41
RTN3O95197 MIR892B-201ENST00000401279 77 ntBASIC-0.03□□□□□ -2.41
RTN3O95197 RNU6-781P-201ENST00000516377 101 ntBASIC-0.03□□□□□ -2.41
RTN3O95197 RNU7-13P-201ENST00000516413 62 ntBASIC-0.03□□□□□ -2.41
RTN3O95197 RNU6-426P-201ENST00000516464 97 ntBASIC-0.03□□□□□ -2.41
RTN3O95197 RNU6-782P-201ENST00000516852 104 ntBASIC-0.03□□□□□ -2.41
RTN3O95197 MTND5P40-201ENST00000559945 246 ntBASIC-0.03□□□□□ -2.41
RTN3O95197 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.04□□□□□ -2.42
RTN3O95197 MIR593-201ENST00000384856 100 ntBASIC-0.04□□□□□ -2.42
RTN3O95197 RNU6-735P-201ENST00000410612 107 ntBASIC-0.04□□□□□ -2.42
RTN3O95197 RNU7-74P-201ENST00000459104 62 ntBASIC-0.04□□□□□ -2.42
RTN3O95197 MIR4290-201ENST00000583807 95 ntBASIC-0.04□□□□□ -2.42
RTN3O95197 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.05□□□□□ -2.42
RTN3O95197 RNU6-652P-201ENST00000365488 107 ntBASIC-0.05□□□□□ -2.42
RTN3O95197 RNU6-756P-201ENST00000383997 107 ntBASIC-0.05□□□□□ -2.42
RTN3O95197 RNU6-524P-201ENST00000384270 107 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms