Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 MIR655-201ENST00000362159 97 ntBASIC-0.53□□□□□ -2.49
SEMA3DO95025 RNU6-797P-201ENST00000363101 109 ntBASIC-0.53□□□□□ -2.49
SEMA3DO95025 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.53□□□□□ -2.49
SEMA3DO95025 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.53□□□□□ -2.49
SEMA3DO95025 RNU6-811P-201ENST00000384069 107 ntBASIC-0.53□□□□□ -2.49
SEMA3DO95025 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.53□□□□□ -2.49
SEMA3DO95025 RNU6-284P-201ENST00000411105 106 ntBASIC-0.53□□□□□ -2.49
SEMA3DO95025 RNU7-188P-201ENST00000517063 64 ntBASIC-0.53□□□□□ -2.49
SEMA3DO95025 IGKV1-22-201ENST00000524313 326 ntBASIC-0.53□□□□□ -2.49
SEMA3DO95025 MIR4788-201ENST00000639104 80 ntBASIC-0.53□□□□□ -2.49
SEMA3DO95025 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.54□□□□□ -2.5
SEMA3DO95025 RNY1P11-201ENST00000363759 113 ntBASIC-0.54□□□□□ -2.5
SEMA3DO95025 RNU6-309P-201ENST00000364573 106 ntBASIC-0.54□□□□□ -2.5
SEMA3DO95025 SNORD115-35-201ENST00000365122 82 ntBASIC-0.54□□□□□ -2.5
SEMA3DO95025 RNU6-480P-201ENST00000384332 107 ntBASIC-0.54□□□□□ -2.5
SEMA3DO95025 MIR519E-201ENST00000385075 84 ntBASIC-0.54□□□□□ -2.5
SEMA3DO95025 RNU6-918P-201ENST00000391219 106 ntBASIC-0.54□□□□□ -2.5
SEMA3DO95025 SNORA75.5-201ENST00000391291 81 ntBASIC-0.54□□□□□ -2.5
SEMA3DO95025 MIR6844-201ENST00000637122 62 ntBASIC-0.54□□□□□ -2.5
SEMA3DO95025 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.54□□□□□ -2.5
SEMA3DO95025 RNA5SP205-201ENST00000364653 136 ntBASIC-0.55□□□□□ -2.5
SEMA3DO95025 RNU6-571P-201ENST00000384128 107 ntBASIC-0.55□□□□□ -2.5
SEMA3DO95025 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.55□□□□□ -2.5
SEMA3DO95025 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.55□□□□□ -2.5
SEMA3DO95025 MIR181B2-201ENST00000385004 89 ntBASIC-0.55□□□□□ -2.5
SEMA3DO95025 AC107027.2-201ENST00000512197 115 ntBASIC-0.55□□□□□ -2.5
SEMA3DO95025 RNU6-850P-201ENST00000516934 103 ntBASIC-0.55□□□□□ -2.5
SEMA3DO95025 YWHAEP2-201ENST00000580066 112 ntBASIC-0.55□□□□□ -2.5
SEMA3DO95025 MIR4263-201ENST00000584745 83 ntBASIC-0.55□□□□□ -2.5
SEMA3DO95025 uc_338.10-201ENST00000621872 182 ntBASIC-0.55□□□□□ -2.5
SEMA3DO95025 RNU4-84P-201ENST00000364200 139 ntBASIC-0.56□□□□□ -2.5
SEMA3DO95025 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.56□□□□□ -2.5
SEMA3DO95025 MIR34C-201ENST00000384831 77 ntBASIC-0.56□□□□□ -2.5
SEMA3DO95025 MIR516A2-201ENST00000384888 90 ntBASIC-0.56□□□□□ -2.5
SEMA3DO95025 MIR516A1-201ENST00000385033 90 ntBASIC-0.56□□□□□ -2.5
SEMA3DO95025 MT-TQ-201ENST00000387372 72 ntBASIC-0.56□□□□□ -2.5
SEMA3DO95025 SNORD58.1-201ENST00000391313 66 ntBASIC-0.56□□□□□ -2.5
SEMA3DO95025 AC114755.3-201ENST00000481111 251 ntBASIC-0.56□□□□□ -2.5
SEMA3DO95025 RNY4P20-201ENST00000516678 93 ntBASIC-0.56□□□□□ -2.5
SEMA3DO95025 AL117187.1-201ENST00000555482 181 ntBASIC-0.56□□□□□ -2.5
SEMA3DO95025 AC069503.3-201ENST00000618674 145 ntBASIC-0.56□□□□□ -2.5
SEMA3DO95025 AL391099.1-201ENST00000624635 187 ntBASIC-0.56□□□□□ -2.5
SEMA3DO95025 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.57□□□□□ -2.5
SEMA3DO95025 RNU4-32P-201ENST00000363404 141 ntBASIC-0.57□□□□□ -2.5
SEMA3DO95025 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.57□□□□□ -2.5
SEMA3DO95025 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.57□□□□□ -2.5
SEMA3DO95025 MIR617-201ENST00000385030 97 ntBASIC-0.57□□□□□ -2.5
SEMA3DO95025 AC093423.1-201ENST00000440817 142 ntBASIC-0.57□□□□□ -2.5
SEMA3DO95025 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.57□□□□□ -2.5
SEMA3DO95025 AC008737.2-201ENST00000599446 118 ntBASIC-0.57□□□□□ -2.5
SEMA3DO95025 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.58□□□□□ -2.5
SEMA3DO95025 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.58□□□□□ -2.5
SEMA3DO95025 SNORD114-11-201ENST00000363738 75 ntBASIC-0.58□□□□□ -2.5
SEMA3DO95025 SNORD18B-201ENST00000365659 72 ntBASIC-0.58□□□□□ -2.5
SEMA3DO95025 RNU6-47P-201ENST00000383866 107 ntBASIC-0.58□□□□□ -2.5
SEMA3DO95025 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.58□□□□□ -2.5
SEMA3DO95025 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.58□□□□□ -2.5
SEMA3DO95025 MIR548AX-201ENST00000580117 73 ntBASIC-0.58□□□□□ -2.5
SEMA3DO95025 MIR548AE1-201ENST00000583292 70 ntBASIC-0.58□□□□□ -2.5
SEMA3DO95025 AC108081.1-201ENST00000604358 221 ntBASIC-0.58□□□□□ -2.5
SEMA3DO95025 AC087741.2-201ENST00000619415 172 ntBASIC-0.58□□□□□ -2.5
SEMA3DO95025 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.59□□□□□ -2.5
SEMA3DO95025 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.59□□□□□ -2.5
SEMA3DO95025 MIR606-201ENST00000384851 96 ntBASIC-0.59□□□□□ -2.5
SEMA3DO95025 AL603914.1-201ENST00000401964 204 ntBASIC-0.59□□□□□ -2.5
SEMA3DO95025 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.59□□□□□ -2.5
SEMA3DO95025 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.59□□□□□ -2.5
SEMA3DO95025 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.59□□□□□ -2.5
SEMA3DO95025 MIR4460-201ENST00000577862 86 ntBASIC-0.59□□□□□ -2.5
SEMA3DO95025 MIR4324-201ENST00000584846 72 ntBASIC-0.59□□□□□ -2.5
SEMA3DO95025 AL137067.1-201ENST00000615933 120 ntBASIC-0.59□□□□□ -2.5
SEMA3DO95025 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.59□□□□□ -2.5
SEMA3DO95025 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.6□□□□□ -2.51
SEMA3DO95025 SNORD115-44-201ENST00000365391 82 ntBASIC-0.6□□□□□ -2.51
SEMA3DO95025 MIR2113-201ENST00000459007 91 ntBASIC-0.6□□□□□ -2.51
SEMA3DO95025 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.6□□□□□ -2.51
SEMA3DO95025 AL590491.3-201ENST00000610731 82 ntBASIC-0.6□□□□□ -2.51
SEMA3DO95025 MIR6738-201ENST00000619620 64 ntBASIC-0.6□□□□□ -2.51
SEMA3DO95025 MIR3658-201ENST00000636291 56 ntBASIC-0.6□□□□□ -2.51
SEMA3DO95025 RNU6-312P-201ENST00000364629 107 ntBASIC-0.61□□□□□ -2.51
SEMA3DO95025 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.61□□□□□ -2.51
SEMA3DO95025 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.61□□□□□ -2.51
SEMA3DO95025 SNORA51.5-201ENST00000384126 131 ntBASIC-0.61□□□□□ -2.51
SEMA3DO95025 MIR196A1-201ENST00000388006 70 ntBASIC-0.61□□□□□ -2.51
SEMA3DO95025 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.61□□□□□ -2.51
SEMA3DO95025 RNA5SP266-201ENST00000410273 108 ntBASIC-0.61□□□□□ -2.51
SEMA3DO95025 RNU4-71P-201ENST00000516258 113 ntBASIC-0.61□□□□□ -2.51
SEMA3DO95025 RNU7-6P-201ENST00000516845 62 ntBASIC-0.61□□□□□ -2.51
SEMA3DO95025 RNU6-175P-201ENST00000516896 107 ntBASIC-0.61□□□□□ -2.51
SEMA3DO95025 MIR3646-201ENST00000578301 84 ntBASIC-0.61□□□□□ -2.51
SEMA3DO95025 MIR3128-201ENST00000581957 66 ntBASIC-0.61□□□□□ -2.51
SEMA3DO95025 AL627230.5-201ENST00000619807 58 ntBASIC-0.61□□□□□ -2.51
SEMA3DO95025 SNORD114-29-201ENST00000364819 70 ntBASIC-0.62□□□□□ -2.51
SEMA3DO95025 RNU6-10P-201ENST00000384036 107 ntBASIC-0.62□□□□□ -2.51
SEMA3DO95025 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.62□□□□□ -2.51
SEMA3DO95025 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.62□□□□□ -2.51
SEMA3DO95025 SNORD37.2-201ENST00000391075 66 ntBASIC-0.62□□□□□ -2.51
SEMA3DO95025 RNU6-287P-201ENST00000516230 98 ntBASIC-0.62□□□□□ -2.51
SEMA3DO95025 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.62□□□□□ -2.51
SEMA3DO95025 RNU6-521P-201ENST00000516663 105 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms