Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.44□□□□□ -2.48
UPK3AO75631 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.44□□□□□ -2.48
UPK3AO75631 RNU6-309P-201ENST00000364573 106 ntBASIC-0.44□□□□□ -2.48
UPK3AO75631 RNU6-571P-201ENST00000384128 107 ntBASIC-0.44□□□□□ -2.48
UPK3AO75631 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.44□□□□□ -2.48
UPK3AO75631 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.44□□□□□ -2.48
UPK3AO75631 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.44□□□□□ -2.48
UPK3AO75631 MIR4473-201ENST00000583731 91 ntBASIC-0.44□□□□□ -2.48
UPK3AO75631 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.45□□□□□ -2.48
UPK3AO75631 RNU1-141P-201ENST00000364623 158 ntBASIC-0.45□□□□□ -2.48
UPK3AO75631 SNORD114-15-201ENST00000364687 72 ntBASIC-0.45□□□□□ -2.48
UPK3AO75631 SNORA20.1-201ENST00000364790 130 ntBASIC-0.45□□□□□ -2.48
UPK3AO75631 RNY4P3-201ENST00000365254 95 ntBASIC-0.45□□□□□ -2.48
UPK3AO75631 RNU7-106P-201ENST00000459514 67 ntBASIC-0.45□□□□□ -2.48
UPK3AO75631 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.45□□□□□ -2.48
UPK3AO75631 MIR3666-201ENST00000607845 111 ntBASIC-0.45□□□□□ -2.48
UPK3AO75631 AC062037.2-201ENST00000610137 73 ntBASIC-0.45□□□□□ -2.48
UPK3AO75631 AL137067.1-201ENST00000615933 120 ntBASIC-0.45□□□□□ -2.48
UPK3AO75631 MIR3658-201ENST00000636291 56 ntBASIC-0.45□□□□□ -2.48
UPK3AO75631 RNY1P11-201ENST00000363759 113 ntBASIC-0.46□□□□□ -2.48
UPK3AO75631 MIR568-201ENST00000385036 95 ntBASIC-0.46□□□□□ -2.48
UPK3AO75631 RNU6-239P-201ENST00000390990 99 ntBASIC-0.46□□□□□ -2.48
UPK3AO75631 AC109327.2-201ENST00000448339 378 ntBASIC-0.46□□□□□ -2.48
UPK3AO75631 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.46□□□□□ -2.48
UPK3AO75631 RNA5SP275-201ENST00000363936 118 ntBASIC-0.47□□□□□ -2.48
UPK3AO75631 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.47□□□□□ -2.48
UPK3AO75631 MIR34C-201ENST00000384831 77 ntBASIC-0.47□□□□□ -2.48
UPK3AO75631 AL603914.1-201ENST00000401964 204 ntBASIC-0.47□□□□□ -2.48
UPK3AO75631 RPS29P8-201ENST00000445109 171 ntBASIC-0.47□□□□□ -2.48
UPK3AO75631 RNU6-850P-201ENST00000516934 103 ntBASIC-0.47□□□□□ -2.48
UPK3AO75631 AC022559.1-201ENST00000520905 205 ntBASIC-0.47□□□□□ -2.48
UPK3AO75631 AC108081.1-201ENST00000604358 221 ntBASIC-0.47□□□□□ -2.48
UPK3AO75631 AL162726.3-218ENST00000636401 95 ntBASIC-0.47□□□□□ -2.48
UPK3AO75631 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.48□□□□□ -2.49
UPK3AO75631 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.48□□□□□ -2.49
UPK3AO75631 RN7SL660P-201ENST00000614852 299 ntBASIC-0.48□□□□□ -2.49
UPK3AO75631 MIR516A2-201ENST00000384888 90 ntBASIC-0.49□□□□□ -2.49
UPK3AO75631 MIR224-201ENST00000384889 81 ntBASIC-0.49□□□□□ -2.49
UPK3AO75631 MIR516A1-201ENST00000385033 90 ntBASIC-0.49□□□□□ -2.49
UPK3AO75631 MIR519E-201ENST00000385075 84 ntBASIC-0.49□□□□□ -2.49
UPK3AO75631 AC096531.1-201ENST00000419107 107 ntBASIC-0.49□□□□□ -2.49
UPK3AO75631 AL118496.2-201ENST00000448300 230 ntBASIC-0.49□□□□□ -2.49
UPK3AO75631 RNU7-6P-201ENST00000516845 62 ntBASIC-0.49□□□□□ -2.49
UPK3AO75631 RNU7-188P-201ENST00000517063 64 ntBASIC-0.49□□□□□ -2.49
UPK3AO75631 MIR548AG2-201ENST00000581228 64 ntBASIC-0.49□□□□□ -2.49
UPK3AO75631 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.49□□□□□ -2.49
UPK3AO75631 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.49□□□□□ -2.49
UPK3AO75631 AC087741.2-201ENST00000619415 172 ntBASIC-0.49□□□□□ -2.49
UPK3AO75631 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.5□□□□□ -2.49
UPK3AO75631 U8.6-201ENST00000364939 135 ntBASIC-0.5□□□□□ -2.49
UPK3AO75631 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.5□□□□□ -2.49
UPK3AO75631 MIR617-201ENST00000385030 97 ntBASIC-0.5□□□□□ -2.49
UPK3AO75631 RNA5SP300-201ENST00000391197 107 ntBASIC-0.5□□□□□ -2.49
UPK3AO75631 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.5□□□□□ -2.49
UPK3AO75631 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.5□□□□□ -2.49
UPK3AO75631 YWHAEP2-201ENST00000580066 112 ntBASIC-0.5□□□□□ -2.49
UPK3AO75631 AC069503.3-201ENST00000618674 145 ntBASIC-0.5□□□□□ -2.49
UPK3AO75631 uc_338.10-201ENST00000621872 182 ntBASIC-0.5□□□□□ -2.49
UPK3AO75631 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.51□□□□□ -2.49
UPK3AO75631 SNORD95.1-201ENST00000364099 68 ntBASIC-0.51□□□□□ -2.49
UPK3AO75631 RNU4-84P-201ENST00000364200 139 ntBASIC-0.51□□□□□ -2.49
UPK3AO75631 SNORD115-44-201ENST00000365391 82 ntBASIC-0.51□□□□□ -2.49
UPK3AO75631 SNORD38.2-201ENST00000384470 69 ntBASIC-0.51□□□□□ -2.49
UPK3AO75631 RNU6-30P-201ENST00000384561 107 ntBASIC-0.51□□□□□ -2.49
UPK3AO75631 AC244250.2-201ENST00000418731 148 ntBASIC-0.51□□□□□ -2.49
UPK3AO75631 MIR4263-201ENST00000584745 83 ntBASIC-0.51□□□□□ -2.49
UPK3AO75631 MIR4788-201ENST00000639104 80 ntBASIC-0.51□□□□□ -2.49
UPK3AO75631 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.52□□□□□ -2.49
UPK3AO75631 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.52□□□□□ -2.49
UPK3AO75631 MIR181B2-201ENST00000385004 89 ntBASIC-0.52□□□□□ -2.49
UPK3AO75631 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.52□□□□□ -2.49
UPK3AO75631 RNU7-121P-201ENST00000516604 62 ntBASIC-0.52□□□□□ -2.49
UPK3AO75631 RNU6-521P-201ENST00000516663 105 ntBASIC-0.52□□□□□ -2.49
UPK3AO75631 MIR4460-201ENST00000577862 86 ntBASIC-0.52□□□□□ -2.49
UPK3AO75631 MIR6507-201ENST00000613630 70 ntBASIC-0.52□□□□□ -2.49
UPK3AO75631 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.53□□□□□ -2.49
UPK3AO75631 RNU6-811P-201ENST00000384069 107 ntBASIC-0.53□□□□□ -2.49
UPK3AO75631 MIR2113-201ENST00000459007 91 ntBASIC-0.53□□□□□ -2.49
UPK3AO75631 RNU6-327P-201ENST00000516270 127 ntBASIC-0.53□□□□□ -2.49
UPK3AO75631 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.53□□□□□ -2.49
UPK3AO75631 U4.1-201ENST00000620349 87 ntBASIC-0.53□□□□□ -2.49
UPK3AO75631 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.53□□□□□ -2.49
UPK3AO75631 SNORA51.5-201ENST00000384126 131 ntBASIC-0.54□□□□□ -2.5
UPK3AO75631 AC093423.1-201ENST00000440817 142 ntBASIC-0.54□□□□□ -2.5
UPK3AO75631 AC074198.2-201ENST00000508153 258 ntBASIC-0.54□□□□□ -2.5
UPK3AO75631 AC130289.1-201ENST00000577321 73 ntBASIC-0.54□□□□□ -2.5
UPK3AO75631 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.54□□□□□ -2.5
UPK3AO75631 MIR548AZ-201ENST00000616567 95 ntBASIC-0.54□□□□□ -2.5
UPK3AO75631 AC021753.1-201ENST00000635724 168 ntBASIC-0.54□□□□□ -2.5
UPK3AO75631 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.55□□□□□ -2.5
UPK3AO75631 MIR3163-201ENST00000581592 73 ntBASIC-0.55□□□□□ -2.5
UPK3AO75631 AC072026.1-201ENST00000605023 201 ntBASIC-0.55□□□□□ -2.5
UPK3AO75631 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.56□□□□□ -2.5
UPK3AO75631 SNORD115-19-201ENST00000363098 82 ntBASIC-0.56□□□□□ -2.5
UPK3AO75631 SNORD115-18-201ENST00000363293 82 ntBASIC-0.56□□□□□ -2.5
UPK3AO75631 SNORD115-17-201ENST00000364612 82 ntBASIC-0.56□□□□□ -2.5
UPK3AO75631 RNA5SP205-201ENST00000364653 136 ntBASIC-0.56□□□□□ -2.5
UPK3AO75631 SNORD114-29-201ENST00000364819 70 ntBASIC-0.56□□□□□ -2.5
UPK3AO75631 SNORA32.3-201ENST00000384772 121 ntBASIC-0.56□□□□□ -2.5
UPK3AO75631 MT-TI-201ENST00000387365 69 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms