Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 MIR101-2-201ENST00000362195 79 ntBASIC1.43□□□□□ -2.18
VAMP4O75379 RNU6-675P-201ENST00000384236 104 ntBASIC1.43□□□□□ -2.18
VAMP4O75379 MIR618-201ENST00000385287 98 ntBASIC1.43□□□□□ -2.18
VAMP4O75379 SNORD100-201ENST00000408573 76 ntBASIC1.43□□□□□ -2.18
VAMP4O75379 MIR548H5-201ENST00000580314 60 ntBASIC1.43□□□□□ -2.18
VAMP4O75379 MIR4804-201ENST00000581683 73 ntBASIC1.43□□□□□ -2.18
VAMP4O75379 MIR6078-201ENST00000611069 100 ntBASIC1.43□□□□□ -2.18
VAMP4O75379 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
VAMP4O75379 MIR19B1-201ENST00000384829 87 ntBASIC1.42□□□□□ -2.18
VAMP4O75379 MIR635-201ENST00000384830 98 ntBASIC1.42□□□□□ -2.18
VAMP4O75379 MIR222-201ENST00000384992 110 ntBASIC1.42□□□□□ -2.18
VAMP4O75379 MIR518E-201ENST00000385252 88 ntBASIC1.42□□□□□ -2.18
VAMP4O75379 SNORA26.2-201ENST00000390922 122 ntBASIC1.42□□□□□ -2.18
VAMP4O75379 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.42□□□□□ -2.18
VAMP4O75379 Y_RNA.593-201ENST00000410292 98 ntBASIC1.42□□□□□ -2.18
VAMP4O75379 RNY4P29-201ENST00000410801 97 ntBASIC1.42□□□□□ -2.18
VAMP4O75379 AC015818.7-201ENST00000428754 109 ntBASIC1.42□□□□□ -2.18
VAMP4O75379 AC087499.7-201ENST00000441958 109 ntBASIC1.42□□□□□ -2.18
VAMP4O75379 RNU7-56P-201ENST00000458744 62 ntBASIC1.42□□□□□ -2.18
VAMP4O75379 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.42□□□□□ -2.18
VAMP4O75379 SNORD36A-201ENST00000362874 73 ntBASIC1.41□□□□□ -2.18
VAMP4O75379 RNU6-364P-201ENST00000384387 107 ntBASIC1.41□□□□□ -2.18
VAMP4O75379 MIR519A1-201ENST00000385257 85 ntBASIC1.41□□□□□ -2.18
VAMP4O75379 RNU6-1254P-201ENST00000391266 104 ntBASIC1.41□□□□□ -2.18
VAMP4O75379 MIR1827-201ENST00000408549 66 ntBASIC1.41□□□□□ -2.18
VAMP4O75379 AL161932.1-201ENST00000437408 146 ntBASIC1.41□□□□□ -2.18
VAMP4O75379 AC067940.1-201ENST00000458411 300 ntBASIC1.41□□□□□ -2.18
VAMP4O75379 RNU6-977P-201ENST00000516411 103 ntBASIC1.4□□□□□ -2.19
VAMP4O75379 MIR4668-201ENST00000582284 70 ntBASIC1.4□□□□□ -2.19
VAMP4O75379 RNU6-219P-201ENST00000364728 107 ntBASIC1.39□□□□□ -2.19
VAMP4O75379 Y_RNA.536-201ENST00000384621 113 ntBASIC1.39□□□□□ -2.19
VAMP4O75379 MIR516A2-201ENST00000384888 90 ntBASIC1.39□□□□□ -2.19
VAMP4O75379 MIR516A1-201ENST00000385033 90 ntBASIC1.39□□□□□ -2.19
VAMP4O75379 MIR100-201ENST00000385259 80 ntBASIC1.39□□□□□ -2.19
VAMP4O75379 SNORD63B-201ENST00000411005 70 ntBASIC1.39□□□□□ -2.19
VAMP4O75379 Y_RNA.620-201ENST00000411009 88 ntBASIC1.39□□□□□ -2.19
VAMP4O75379 AC062037.1-201ENST00000605302 128 ntBASIC1.39□□□□□ -2.19
VAMP4O75379 SNORD114-21-201ENST00000606412 72 ntBASIC1.39□□□□□ -2.19
VAMP4O75379 Y_RNA.118-201ENST00000363300 101 ntBASIC1.38□□□□□ -2.19
VAMP4O75379 Y_RNA.508-201ENST00000384502 114 ntBASIC1.38□□□□□ -2.19
VAMP4O75379 RNU6-243P-201ENST00000391140 107 ntBASIC1.38□□□□□ -2.19
VAMP4O75379 RNU7-102P-201ENST00000458948 62 ntBASIC1.38□□□□□ -2.19
VAMP4O75379 Y_RNA.648-201ENST00000459455 110 ntBASIC1.38□□□□□ -2.19
VAMP4O75379 RNU7-106P-201ENST00000459514 67 ntBASIC1.38□□□□□ -2.19
VAMP4O75379 TRAJ51-201ENST00000504127 63 ntBASIC1.38□□□□□ -2.19
VAMP4O75379 RN7SKP12-201ENST00000516275 143 ntBASIC1.38□□□□□ -2.19
VAMP4O75379 Y_RNA.697-201ENST00000516776 113 ntBASIC1.38□□□□□ -2.19
VAMP4O75379 AP003327.1-201ENST00000529684 127 ntBASIC1.38□□□□□ -2.19
VAMP4O75379 IGLL4P-201ENST00000614590 133 ntBASIC1.38□□□□□ -2.19
VAMP4O75379 MIR8070-201ENST00000616510 88 ntBASIC1.38□□□□□ -2.19
VAMP4O75379 RNY1P1-201ENST00000364372 112 ntBASIC1.37□□□□□ -2.19
VAMP4O75379 Y_RNA.388-201ENST00000383919 113 ntBASIC1.37□□□□□ -2.19
VAMP4O75379 RNU6-1152P-201ENST00000384576 107 ntBASIC1.37□□□□□ -2.19
VAMP4O75379 RNU1-119P-201ENST00000391122 165 ntBASIC1.37□□□□□ -2.19
VAMP4O75379 Y_RNA.609-201ENST00000410669 89 ntBASIC1.37□□□□□ -2.19
VAMP4O75379 RNU6-402P-201ENST00000410678 103 ntBASIC1.37□□□□□ -2.19
VAMP4O75379 FABP5P4-201ENST00000437203 171 ntBASIC1.37□□□□□ -2.19
VAMP4O75379 snoU13.18-201ENST00000459483 104 ntBASIC1.37□□□□□ -2.19
VAMP4O75379 RNU6-1110P-201ENST00000516462 101 ntBASIC1.37□□□□□ -2.19
VAMP4O75379 RNU6-448P-201ENST00000517052 107 ntBASIC1.37□□□□□ -2.19
VAMP4O75379 RNY1P4-201ENST00000384595 115 ntBASIC1.36□□□□□ -2.19
VAMP4O75379 MIR200A-201ENST00000384875 90 ntBASIC1.36□□□□□ -2.19
VAMP4O75379 MIR4295-201ENST00000585286 85 ntBASIC1.36□□□□□ -2.19
VAMP4O75379 AL136317.1-201ENST00000612653 226 ntBASIC1.36□□□□□ -2.19
VAMP4O75379 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.36□□□□□ -2.19
VAMP4O75379 RNU6-633P-201ENST00000362612 103 ntBASIC1.35□□□□□ -2.19
VAMP4O75379 RNU6-497P-201ENST00000365316 104 ntBASIC1.35□□□□□ -2.19
VAMP4O75379 AC092628.1-201ENST00000436250 252 ntBASIC1.35□□□□□ -2.19
VAMP4O75379 SNORD4B-201ENST00000459083 72 ntBASIC1.35□□□□□ -2.19
VAMP4O75379 U7.7-201ENST00000459276 60 ntBASIC1.35□□□□□ -2.19
VAMP4O75379 AC138907.6-201ENST00000568401 126 ntBASIC1.35□□□□□ -2.19
VAMP4O75379 AC138869.1-201ENST00000568623 124 ntBASIC1.35□□□□□ -2.19
VAMP4O75379 MIR96-201ENST00000362288 78 ntBASIC1.34□□□□□ -2.19
VAMP4O75379 RNU1-124P-201ENST00000363861 145 ntBASIC1.34□□□□□ -2.19
VAMP4O75379 MIR520F-201ENST00000384824 87 ntBASIC1.34□□□□□ -2.19
VAMP4O75379 MIR1285-1-201ENST00000408593 84 ntBASIC1.34□□□□□ -2.19
VAMP4O75379 RNU6-519P-201ENST00000410590 108 ntBASIC1.34□□□□□ -2.19
VAMP4O75379 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.34□□□□□ -2.19
VAMP4O75379 AC008608.1-201ENST00000603910 127 ntBASIC1.34□□□□□ -2.19
VAMP4O75379 RMST_2.1-201ENST00000617263 136 ntBASIC1.34□□□□□ -2.19
VAMP4O75379 MIR494-201ENST00000349529 81 ntBASIC1.33□□□□□ -2.2
VAMP4O75379 AC087343.1-201ENST00000477341 475 ntBASIC1.33□□□□□ -2.2
VAMP4O75379 RNU6-267P-201ENST00000516714 103 ntBASIC1.33□□□□□ -2.2
VAMP4O75379 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.33□□□□□ -2.2
VAMP4O75379 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
VAMP4O75379 RNU6-1260P-201ENST00000362944 107 ntBASIC1.32□□□□□ -2.2
VAMP4O75379 RNU6-509P-201ENST00000363519 107 ntBASIC1.32□□□□□ -2.2
VAMP4O75379 RNU6-291P-201ENST00000384720 107 ntBASIC1.32□□□□□ -2.2
VAMP4O75379 RNU6-535P-201ENST00000384722 107 ntBASIC1.32□□□□□ -2.2
VAMP4O75379 RNU7-85P-201ENST00000458851 63 ntBASIC1.32□□□□□ -2.2
VAMP4O75379 RNA5SP404-201ENST00000517118 132 ntBASIC1.32□□□□□ -2.2
VAMP4O75379 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.32□□□□□ -2.2
VAMP4O75379 MIR6767-201ENST00000637302 66 ntBASIC1.32□□□□□ -2.2
VAMP4O75379 Y_RNA.224-201ENST00000364308 111 ntBASIC1.31□□□□□ -2.2
VAMP4O75379 AC097635.1-201ENST00000450678 155 ntBASIC1.31□□□□□ -2.2
VAMP4O75379 RNU7-195P-201ENST00000458793 62 ntBASIC1.31□□□□□ -2.2
VAMP4O75379 Y_RNA.809-201ENST00000516058 95 ntBASIC1.31□□□□□ -2.2
VAMP4O75379 AL078603.1-201ENST00000603824 313 ntBASIC1.31□□□□□ -2.2
VAMP4O75379 RNU4-38P-201ENST00000364472 129 ntBASIC1.3□□□□□ -2.2
VAMP4O75379 snoU13.11-201ENST00000459219 104 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms