Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 SNORD41.1-201ENST00000391000 69 ntBASIC0.21□□□□□ -2.38
ZNF253O75346 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.21□□□□□ -2.38
ZNF253O75346 RNU7-104P-201ENST00000459398 79 ntBASIC0.21□□□□□ -2.38
ZNF253O75346 Y_RNA.809-201ENST00000516058 95 ntBASIC0.21□□□□□ -2.38
ZNF253O75346 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.21□□□□□ -2.38
ZNF253O75346 MIR6755-201ENST00000619993 66 ntBASIC0.21□□□□□ -2.38
ZNF253O75346 AL162376.1-201ENST00000624117 175 ntBASIC0.21□□□□□ -2.38
ZNF253O75346 AL512310.12-203ENST00000640543 90 ntBASIC0.21□□□□□ -2.38
ZNF253O75346 RNA5SP62-201ENST00000363457 110 ntBASIC0.2□□□□□ -2.38
ZNF253O75346 Y_RNA.155-201ENST00000363632 101 ntBASIC0.2□□□□□ -2.38
ZNF253O75346 RNU6-716P-201ENST00000365621 103 ntBASIC0.2□□□□□ -2.38
ZNF253O75346 SNORD116-14-201ENST00000383894 92 ntBASIC0.2□□□□□ -2.38
ZNF253O75346 SNORD116-17-201ENST00000383929 92 ntBASIC0.2□□□□□ -2.38
ZNF253O75346 RNU6-1201P-201ENST00000384227 107 ntBASIC0.2□□□□□ -2.38
ZNF253O75346 SNORD116-15-201ENST00000384445 92 ntBASIC0.2□□□□□ -2.38
ZNF253O75346 SNORD116-19-201ENST00000384729 92 ntBASIC0.2□□□□□ -2.38
ZNF253O75346 RNU6-816P-201ENST00000390914 107 ntBASIC0.2□□□□□ -2.38
ZNF253O75346 RNU6-1268P-201ENST00000391214 107 ntBASIC0.2□□□□□ -2.38
ZNF253O75346 RNU6-1239P-201ENST00000391310 107 ntBASIC0.2□□□□□ -2.38
ZNF253O75346 RNU7-195P-201ENST00000458793 62 ntBASIC0.2□□□□□ -2.38
ZNF253O75346 AL035470.1-201ENST00000622571 220 ntBASIC0.2□□□□□ -2.38
ZNF253O75346 AC067863.3-201ENST00000624172 122 ntBASIC0.2□□□□□ -2.38
ZNF253O75346 Y_RNA.309-201ENST00000365046 111 ntBASIC0.19□□□□□ -2.38
ZNF253O75346 Y_RNA.377-201ENST00000365644 108 ntBASIC0.19□□□□□ -2.38
ZNF253O75346 MIR548M-201ENST00000408260 86 ntBASIC0.19□□□□□ -2.38
ZNF253O75346 MIR548G-201ENST00000408442 89 ntBASIC0.19□□□□□ -2.38
ZNF253O75346 RNA5SP247-201ENST00000411181 105 ntBASIC0.19□□□□□ -2.38
ZNF253O75346 Y_RNA.649-201ENST00000459077 103 ntBASIC0.19□□□□□ -2.38
ZNF253O75346 RNU7-106P-201ENST00000459514 67 ntBASIC0.19□□□□□ -2.38
ZNF253O75346 AC069113.3-201ENST00000521019 150 ntBASIC0.19□□□□□ -2.38
ZNF253O75346 MTND5P40-201ENST00000559945 246 ntBASIC0.19□□□□□ -2.38
ZNF253O75346 AC007012.1-201ENST00000567192 175 ntBASIC0.19□□□□□ -2.38
ZNF253O75346 MIR4711-201ENST00000578274 70 ntBASIC0.19□□□□□ -2.38
ZNF253O75346 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
ZNF253O75346 AL078603.1-201ENST00000603824 313 ntBASIC0.19□□□□□ -2.38
ZNF253O75346 Y_RNA.173-201ENST00000363776 113 ntBASIC0.18□□□□□ -2.38
ZNF253O75346 Y_RNA.221-201ENST00000364248 96 ntBASIC0.18□□□□□ -2.38
ZNF253O75346 Y_RNA.247-201ENST00000364500 92 ntBASIC0.18□□□□□ -2.38
ZNF253O75346 VTRNA1-3-201ENST00000365645 89 ntBASIC0.18□□□□□ -2.38
ZNF253O75346 RNU6-815P-201ENST00000384080 113 ntBASIC0.18□□□□□ -2.38
ZNF253O75346 MIR548L-201ENST00000408303 86 ntBASIC0.18□□□□□ -2.38
ZNF253O75346 SNORD33.1-201ENST00000516213 88 ntBASIC0.18□□□□□ -2.38
ZNF253O75346 RNU6-1265P-201ENST00000516342 103 ntBASIC0.18□□□□□ -2.38
ZNF253O75346 RNU1-29P-201ENST00000606574 126 ntBASIC0.18□□□□□ -2.38
ZNF253O75346 AL442128.1-201ENST00000615151 90 ntBASIC0.18□□□□□ -2.38
ZNF253O75346 Y_RNA.224-201ENST00000364308 111 ntBASIC0.17□□□□□ -2.38
ZNF253O75346 Y_RNA.323-201ENST00000365157 109 ntBASIC0.17□□□□□ -2.38
ZNF253O75346 RNU6-81P-201ENST00000365608 104 ntBASIC0.17□□□□□ -2.38
ZNF253O75346 Y_RNA.563-201ENST00000384707 108 ntBASIC0.17□□□□□ -2.38
ZNF253O75346 MIR516A2-201ENST00000384888 90 ntBASIC0.17□□□□□ -2.38
ZNF253O75346 MIR516A1-201ENST00000385033 90 ntBASIC0.17□□□□□ -2.38
ZNF253O75346 MIR936-201ENST00000401264 98 ntBASIC0.17□□□□□ -2.38
ZNF253O75346 AC073261.1-201ENST00000429409 121 ntBASIC0.17□□□□□ -2.38
ZNF253O75346 MIR4694-201ENST00000578534 80 ntBASIC0.17□□□□□ -2.38
ZNF253O75346 RNU6-90P-201ENST00000606352 106 ntBASIC0.17□□□□□ -2.38
ZNF253O75346 MIR4315-1-201ENST00000636800 73 ntBASIC0.17□□□□□ -2.38
ZNF253O75346 MIR4315-2-201ENST00000640925 73 ntBASIC0.17□□□□□ -2.38
ZNF253O75346 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
ZNF253O75346 SNORA9.1-201ENST00000362412 131 ntBASIC0.16□□□□□ -2.38
ZNF253O75346 Y_RNA.353-201ENST00000365440 108 ntBASIC0.16□□□□□ -2.38
ZNF253O75346 Y_RNA.423-201ENST00000384057 113 ntBASIC0.16□□□□□ -2.38
ZNF253O75346 RNU6-524P-201ENST00000384270 107 ntBASIC0.16□□□□□ -2.38
ZNF253O75346 RNU6-959P-201ENST00000384671 107 ntBASIC0.16□□□□□ -2.38
ZNF253O75346 RNU6-1254P-201ENST00000391266 104 ntBASIC0.16□□□□□ -2.38
ZNF253O75346 SPINT5P-201ENST00000448174 155 ntBASIC0.16□□□□□ -2.38
ZNF253O75346 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.16□□□□□ -2.38
ZNF253O75346 RNA5SP220-201ENST00000516298 104 ntBASIC0.16□□□□□ -2.38
ZNF253O75346 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.16□□□□□ -2.38
ZNF253O75346 Y_RNA.57-201ENST00000362806 113 ntBASIC0.15□□□□□ -2.39
ZNF253O75346 SNORA2A-201ENST00000383885 135 ntBASIC0.15□□□□□ -2.39
ZNF253O75346 Y_RNA.549-201ENST00000384657 102 ntBASIC0.15□□□□□ -2.39
ZNF253O75346 MIR577-201ENST00000385196 96 ntBASIC0.15□□□□□ -2.39
ZNF253O75346 MIR548A3-201ENST00000385297 97 ntBASIC0.15□□□□□ -2.39
ZNF253O75346 RNA5SP193-201ENST00000410353 107 ntBASIC0.15□□□□□ -2.39
ZNF253O75346 TMSB4XP3-201ENST00000445144 114 ntBASIC0.15□□□□□ -2.39
ZNF253O75346 MIR5706-201ENST00000579841 80 ntBASIC0.15□□□□□ -2.39
ZNF253O75346 AL670379.3-201ENST00000605040 251 ntBASIC0.15□□□□□ -2.39
ZNF253O75346 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.15□□□□□ -2.39
ZNF253O75346 AC073869.9-201ENST00000641610 120 ntBASIC0.15□□□□□ -2.39
ZNF253O75346 MIR548A1-201ENST00000385041 97 ntBASIC0.14□□□□□ -2.39
ZNF253O75346 MIR760-201ENST00000390220 80 ntBASIC0.14□□□□□ -2.39
ZNF253O75346 RNU6-269P-201ENST00000391077 97 ntBASIC0.14□□□□□ -2.39
ZNF253O75346 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.14□□□□□ -2.39
ZNF253O75346 RNU6-1333P-201ENST00000516162 93 ntBASIC0.14□□□□□ -2.39
ZNF253O75346 RNU7-13P-201ENST00000516413 62 ntBASIC0.14□□□□□ -2.39
ZNF253O75346 AC068339.1-201ENST00000526965 141 ntBASIC0.14□□□□□ -2.39
ZNF253O75346 MIR4752-201ENST00000579672 72 ntBASIC0.14□□□□□ -2.39
ZNF253O75346 MIR3920-201ENST00000581751 86 ntBASIC0.14□□□□□ -2.39
ZNF253O75346 SNORD36A-201ENST00000362874 73 ntBASIC0.13□□□□□ -2.39
ZNF253O75346 RNY3P2-201ENST00000362918 102 ntBASIC0.13□□□□□ -2.39
ZNF253O75346 SNORA42.1-201ENST00000363515 137 ntBASIC0.13□□□□□ -2.39
ZNF253O75346 RNA5SP128-201ENST00000365305 116 ntBASIC0.13□□□□□ -2.39
ZNF253O75346 AC096720.1-201ENST00000604441 183 ntBASIC0.13□□□□□ -2.39
ZNF253O75346 Y_RNA.281-201ENST00000364774 94 ntBASIC0.12□□□□□ -2.39
ZNF253O75346 U8.6-201ENST00000364939 135 ntBASIC0.12□□□□□ -2.39
ZNF253O75346 SNORD115-44-201ENST00000365391 82 ntBASIC0.12□□□□□ -2.39
ZNF253O75346 RNU6-243P-201ENST00000391140 107 ntBASIC0.12□□□□□ -2.39
ZNF253O75346 AC008267.6-201ENST00000441664 139 ntBASIC0.12□□□□□ -2.39
ZNF253O75346 RNU7-74P-201ENST00000459104 62 ntBASIC0.12□□□□□ -2.39
ZNF253O75346 MIR5009-201ENST00000578736 100 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms