Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RNU2-4P-201ENST00000606190 192 ntBASIC-1.28□□□□□ -2.61
SGCEO43556 MIR376B-201ENST00000614515 100 ntBASIC-1.28□□□□□ -2.61
SGCEO43556 AC087741.2-201ENST00000619415 172 ntBASIC-1.28□□□□□ -2.61
SGCEO43556 TRDV1-202ENST00000621643 102 ntBASIC-1.28□□□□□ -2.61
SGCEO43556 U6.100-201ENST00000636230 99 ntBASIC-1.28□□□□□ -2.61
SGCEO43556 MIR365A-201ENST00000362260 87 ntBASIC-1.29□□□□□ -2.62
SGCEO43556 SNORD114-17-201ENST00000364699 75 ntBASIC-1.29□□□□□ -2.62
SGCEO43556 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.29□□□□□ -2.62
SGCEO43556 MIR548E-201ENST00000408287 88 ntBASIC-1.29□□□□□ -2.62
SGCEO43556 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.29□□□□□ -2.62
SGCEO43556 AL353813.1-201ENST00000440700 253 ntBASIC-1.29□□□□□ -2.62
SGCEO43556 RNU7-2P-201ENST00000516096 62 ntBASIC-1.29□□□□□ -2.62
SGCEO43556 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.29□□□□□ -2.62
SGCEO43556 MIR4770-201ENST00000579149 58 ntBASIC-1.29□□□□□ -2.62
SGCEO43556 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.29□□□□□ -2.62
SGCEO43556 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.3□□□□□ -2.62
SGCEO43556 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.3□□□□□ -2.62
SGCEO43556 RNU6-592P-201ENST00000411333 103 ntBASIC-1.3□□□□□ -2.62
SGCEO43556 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.3□□□□□ -2.62
SGCEO43556 AC097510.1-201ENST00000510945 133 ntBASIC-1.3□□□□□ -2.62
SGCEO43556 RNU6-412P-201ENST00000516434 106 ntBASIC-1.3□□□□□ -2.62
SGCEO43556 MIR4441-201ENST00000582623 100 ntBASIC-1.3□□□□□ -2.62
SGCEO43556 MIR548O2-201ENST00000616090 70 ntBASIC-1.3□□□□□ -2.62
SGCEO43556 MIR1302-1-201ENST00000637932 143 ntBASIC-1.3□□□□□ -2.62
SGCEO43556 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.31□□□□□ -2.62
SGCEO43556 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.31□□□□□ -2.62
SGCEO43556 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.31□□□□□ -2.62
SGCEO43556 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.31□□□□□ -2.62
SGCEO43556 AC021146.9-201ENST00000512503 156 ntBASIC-1.31□□□□□ -2.62
SGCEO43556 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.31□□□□□ -2.62
SGCEO43556 AC009779.6-201ENST00000603972 165 ntBASIC-1.31□□□□□ -2.62
SGCEO43556 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.32□□□□□ -2.62
SGCEO43556 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.32□□□□□ -2.62
SGCEO43556 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.32□□□□□ -2.62
SGCEO43556 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.32□□□□□ -2.62
SGCEO43556 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.32□□□□□ -2.62
SGCEO43556 MIR527-201ENST00000385244 85 ntBASIC-1.32□□□□□ -2.62
SGCEO43556 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.32□□□□□ -2.62
SGCEO43556 AL445584.3-201ENST00000617173 78 ntBASIC-1.32□□□□□ -2.62
SGCEO43556 MIR6502-201ENST00000617296 76 ntBASIC-1.32□□□□□ -2.62
SGCEO43556 SNORA2.1-201ENST00000363089 137 ntBASIC-1.33□□□□□ -2.62
SGCEO43556 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.33□□□□□ -2.62
SGCEO43556 RNU6-690P-201ENST00000365242 106 ntBASIC-1.33□□□□□ -2.62
SGCEO43556 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.33□□□□□ -2.62
SGCEO43556 MIR216B-201ENST00000390186 82 ntBASIC-1.33□□□□□ -2.62
SGCEO43556 RNU6-121P-201ENST00000410525 99 ntBASIC-1.33□□□□□ -2.62
SGCEO43556 AL589823.1-201ENST00000429577 183 ntBASIC-1.33□□□□□ -2.62
SGCEO43556 SNORD19B-201ENST00000459623 84 ntBASIC-1.33□□□□□ -2.62
SGCEO43556 RNA5SP236-201ENST00000516169 116 ntBASIC-1.33□□□□□ -2.62
SGCEO43556 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.33□□□□□ -2.62
SGCEO43556 SNORA40.15-201ENST00000516884 107 ntBASIC-1.33□□□□□ -2.62
SGCEO43556 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.34□□□□□ -2.62
SGCEO43556 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.34□□□□□ -2.62
SGCEO43556 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.34□□□□□ -2.62
SGCEO43556 AL161932.1-201ENST00000437408 146 ntBASIC-1.34□□□□□ -2.62
SGCEO43556 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.34□□□□□ -2.62
SGCEO43556 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.34□□□□□ -2.62
SGCEO43556 Y_RNA.70-201ENST00000362886 110 ntBASIC-1.35□□□□□ -2.63
SGCEO43556 SNORD115-23-201ENST00000364461 82 ntBASIC-1.35□□□□□ -2.63
SGCEO43556 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.35□□□□□ -2.63
SGCEO43556 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.35□□□□□ -2.63
SGCEO43556 RNA5SP86-201ENST00000390869 98 ntBASIC-1.35□□□□□ -2.63
SGCEO43556 SNORD77B-201ENST00000391112 67 ntBASIC-1.35□□□□□ -2.63
SGCEO43556 RNU6-381P-201ENST00000391259 108 ntBASIC-1.35□□□□□ -2.63
SGCEO43556 MIR1252-201ENST00000408861 65 ntBASIC-1.35□□□□□ -2.63
SGCEO43556 SNORD18.2-201ENST00000459604 70 ntBASIC-1.35□□□□□ -2.63
SGCEO43556 AC068339.1-201ENST00000526965 141 ntBASIC-1.35□□□□□ -2.63
SGCEO43556 AL442663.2-201ENST00000554385 511 ntBASIC-1.35□□□□□ -2.63
SGCEO43556 SNORD36A-201ENST00000362874 73 ntBASIC-1.36□□□□□ -2.63
SGCEO43556 SNORD27-201ENST00000363981 72 ntBASIC-1.36□□□□□ -2.63
SGCEO43556 SNORD116-4-201ENST00000384733 96 ntBASIC-1.36□□□□□ -2.63
SGCEO43556 RNU6-983P-201ENST00000516004 103 ntBASIC-1.36□□□□□ -2.63
SGCEO43556 YWHAEP3-201ENST00000582767 121 ntBASIC-1.36□□□□□ -2.63
SGCEO43556 U4.2-201ENST00000618561 85 ntBASIC-1.36□□□□□ -2.63
SGCEO43556 AC091912.2-201ENST00000624798 167 ntBASIC-1.36□□□□□ -2.63
SGCEO43556 snoR1.1-201ENST00000628177 80 ntBASIC-1.36□□□□□ -2.63
SGCEO43556 MIR6874-201ENST00000635894 71 ntBASIC-1.36□□□□□ -2.63
SGCEO43556 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.37□□□□□ -2.63
SGCEO43556 RNU6-103P-201ENST00000363686 107 ntBASIC-1.37□□□□□ -2.63
SGCEO43556 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.37□□□□□ -2.63
SGCEO43556 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.37□□□□□ -2.63
SGCEO43556 MIR34C-201ENST00000384831 77 ntBASIC-1.37□□□□□ -2.63
SGCEO43556 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.37□□□□□ -2.63
SGCEO43556 RNU6-588P-201ENST00000410281 105 ntBASIC-1.37□□□□□ -2.63
SGCEO43556 AL121914.1-201ENST00000450188 156 ntBASIC-1.37□□□□□ -2.63
SGCEO43556 MIR6773-201ENST00000612812 74 ntBASIC-1.37□□□□□ -2.63
SGCEO43556 MIR6818-201ENST00000621576 65 ntBASIC-1.37□□□□□ -2.63
SGCEO43556 MIR198-201ENST00000637333 62 ntBASIC-1.37□□□□□ -2.63
SGCEO43556 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.38□□□□□ -2.63
SGCEO43556 RNU6-616P-201ENST00000384353 107 ntBASIC-1.38□□□□□ -2.63
SGCEO43556 RNU6-243P-201ENST00000391140 107 ntBASIC-1.38□□□□□ -2.63
SGCEO43556 MIR1468-201ENST00000410600 86 ntBASIC-1.38□□□□□ -2.63
SGCEO43556 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.38□□□□□ -2.63
SGCEO43556 AC138393.2-201ENST00000414742 246 ntBASIC-1.38□□□□□ -2.63
SGCEO43556 RNU7-123P-201ENST00000515911 60 ntBASIC-1.38□□□□□ -2.63
SGCEO43556 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.38□□□□□ -2.63
SGCEO43556 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.39□□□□□ -2.63
SGCEO43556 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.39□□□□□ -2.63
SGCEO43556 SNORD18.1-201ENST00000363807 70 ntBASIC-1.39□□□□□ -2.63
SGCEO43556 RNU6-770P-201ENST00000363929 105 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 201.3 ms