Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MIR3202-2-201ENST00000635980 79 ntBASIC1.11□□□□□ -2.23
SMAD6O43541 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SMAD6O43541 AC023934.1-201ENST00000574529 2389 ntBASIC1.11□□□□□ -2.23
SMAD6O43541 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SMAD6O43541 Y_RNA.57-201ENST00000362806 113 ntBASIC1.1□□□□□ -2.23
SMAD6O43541 RNU6-403P-201ENST00000363163 104 ntBASIC1.1□□□□□ -2.23
SMAD6O43541 RNU6-509P-201ENST00000363519 107 ntBASIC1.1□□□□□ -2.23
SMAD6O43541 Y_RNA.221-201ENST00000364248 96 ntBASIC1.1□□□□□ -2.23
SMAD6O43541 Y_RNA.244-201ENST00000364484 109 ntBASIC1.1□□□□□ -2.23
SMAD6O43541 SNORD113.3-201ENST00000364630 78 ntBASIC1.1□□□□□ -2.23
SMAD6O43541 RNU6-571P-201ENST00000384128 107 ntBASIC1.1□□□□□ -2.23
SMAD6O43541 RNU6-242P-201ENST00000384359 107 ntBASIC1.1□□□□□ -2.23
SMAD6O43541 SNORA72.6-201ENST00000384520 129 ntBASIC1.1□□□□□ -2.23
SMAD6O43541 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.1□□□□□ -2.23
SMAD6O43541 RNU7-185P-201ENST00000459215 60 ntBASIC1.1□□□□□ -2.23
SMAD6O43541 AC087343.1-201ENST00000477341 475 ntBASIC1.1□□□□□ -2.23
SMAD6O43541 MIR8066-201ENST00000617280 78 ntBASIC1.1□□□□□ -2.23
SMAD6O43541 RNU6-633P-201ENST00000362612 103 ntBASIC1.09□□□□□ -2.23
SMAD6O43541 RNU6-524P-201ENST00000384270 107 ntBASIC1.09□□□□□ -2.23
SMAD6O43541 RNA5SP404-201ENST00000517118 132 ntBASIC1.09□□□□□ -2.23
SMAD6O43541 AC023827.1-201ENST00000569247 97 ntBASIC1.09□□□□□ -2.23
SMAD6O43541 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
SMAD6O43541 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
SMAD6O43541 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.08□□□□□ -2.24
SMAD6O43541 RNU4-58P-201ENST00000363192 141 ntBASIC1.08□□□□□ -2.24
SMAD6O43541 RNU6-652P-201ENST00000365488 107 ntBASIC1.08□□□□□ -2.24
SMAD6O43541 RNU6-279P-201ENST00000391297 101 ntBASIC1.08□□□□□ -2.24
SMAD6O43541 MIR1257-201ENST00000408490 117 ntBASIC1.08□□□□□ -2.24
SMAD6O43541 RNU6-857P-201ENST00000515893 110 ntBASIC1.08□□□□□ -2.24
SMAD6O43541 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
SMAD6O43541 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SMAD6O43541 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SMAD6O43541 Y_RNA.226-201ENST00000364337 114 ntBASIC1.07□□□□□ -2.24
SMAD6O43541 SNORA25.9-201ENST00000365087 128 ntBASIC1.07□□□□□ -2.24
SMAD6O43541 RNU6-934P-201ENST00000365154 107 ntBASIC1.07□□□□□ -2.24
SMAD6O43541 RNU6-910P-201ENST00000390844 107 ntBASIC1.07□□□□□ -2.24
SMAD6O43541 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
SMAD6O43541 AL161932.1-201ENST00000437408 146 ntBASIC1.07□□□□□ -2.24
SMAD6O43541 RNU7-21P-201ENST00000459430 62 ntBASIC1.07□□□□□ -2.24
SMAD6O43541 MIR4771-2-201ENST00000577758 74 ntBASIC1.07□□□□□ -2.24
SMAD6O43541 MIR4771-1-201ENST00000582617 74 ntBASIC1.07□□□□□ -2.24
SMAD6O43541 MIR6767-201ENST00000637302 66 ntBASIC1.07□□□□□ -2.24
SMAD6O43541 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SMAD6O43541 Y_RNA.13-201ENST00000362403 112 ntBASIC1.06□□□□□ -2.24
SMAD6O43541 Y_RNA.94-201ENST00000363068 106 ntBASIC1.06□□□□□ -2.24
SMAD6O43541 Y_RNA.316-201ENST00000365118 111 ntBASIC1.06□□□□□ -2.24
SMAD6O43541 Y_RNA.426-201ENST00000384068 113 ntBASIC1.06□□□□□ -2.24
SMAD6O43541 MIR516A2-201ENST00000384888 90 ntBASIC1.06□□□□□ -2.24
SMAD6O43541 MIR516A1-201ENST00000385033 90 ntBASIC1.06□□□□□ -2.24
SMAD6O43541 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.06□□□□□ -2.24
SMAD6O43541 RNU6-519P-201ENST00000410590 108 ntBASIC1.06□□□□□ -2.24
SMAD6O43541 RNA5SP247-201ENST00000411181 105 ntBASIC1.06□□□□□ -2.24
SMAD6O43541 RNU7-153P-201ENST00000516455 62 ntBASIC1.06□□□□□ -2.24
SMAD6O43541 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.06□□□□□ -2.24
SMAD6O43541 AC013244.2-201ENST00000603396 103 ntBASIC1.06□□□□□ -2.24
SMAD6O43541 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.06□□□□□ -2.24
SMAD6O43541 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.06□□□□□ -2.24
SMAD6O43541 AC106800.4-201ENST00000614905 153 ntBASIC1.06□□□□□ -2.24
SMAD6O43541 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SMAD6O43541 SNORA80D-201ENST00000384488 135 ntBASIC1.05□□□□□ -2.24
SMAD6O43541 MIR499A-201ENST00000384903 122 ntBASIC1.05□□□□□ -2.24
SMAD6O43541 SNORD111-201ENST00000408139 94 ntBASIC1.05□□□□□ -2.24
SMAD6O43541 SNORD100-201ENST00000408573 76 ntBASIC1.05□□□□□ -2.24
SMAD6O43541 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.05□□□□□ -2.24
SMAD6O43541 RNU7-85P-201ENST00000458851 63 ntBASIC1.05□□□□□ -2.24
SMAD6O43541 RNU7-106P-201ENST00000459514 67 ntBASIC1.05□□□□□ -2.24
SMAD6O43541 MIR6504-201ENST00000613520 61 ntBASIC1.05□□□□□ -2.24
SMAD6O43541 MIR6082-201ENST00000613604 109 ntBASIC1.05□□□□□ -2.24
SMAD6O43541 SNORD36A-201ENST00000362874 73 ntBASIC1.04□□□□□ -2.24
SMAD6O43541 SNORD114-22-201ENST00000365423 72 ntBASIC1.04□□□□□ -2.24
SMAD6O43541 SNORA25-201ENST00000384384 134 ntBASIC1.04□□□□□ -2.24
SMAD6O43541 MIR125B2-201ENST00000385128 89 ntBASIC1.04□□□□□ -2.24
SMAD6O43541 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SMAD6O43541 MIR889-201ENST00000401280 79 ntBASIC1.04□□□□□ -2.24
SMAD6O43541 RPS26P5-201ENST00000418544 335 ntBASIC1.04□□□□□ -2.24
SMAD6O43541 SNORD4B-201ENST00000459083 72 ntBASIC1.04□□□□□ -2.24
SMAD6O43541 snoU13.11-201ENST00000459219 104 ntBASIC1.04□□□□□ -2.24
SMAD6O43541 Y_RNA.648-201ENST00000459455 110 ntBASIC1.04□□□□□ -2.24
SMAD6O43541 SNORD79.1-201ENST00000516069 84 ntBASIC1.04□□□□□ -2.24
SMAD6O43541 MIR101-2-201ENST00000362195 79 ntBASIC1.03□□□□□ -2.24
SMAD6O43541 RNU1-124P-201ENST00000363861 145 ntBASIC1.03□□□□□ -2.24
SMAD6O43541 RNU1-93P-201ENST00000364704 169 ntBASIC1.03□□□□□ -2.24
SMAD6O43541 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
SMAD6O43541 RNU6-1254P-201ENST00000391266 104 ntBASIC1.03□□□□□ -2.24
SMAD6O43541 MIR1287-201ENST00000408492 90 ntBASIC1.03□□□□□ -2.24
SMAD6O43541 Y_RNA.607-201ENST00000410597 98 ntBASIC1.03□□□□□ -2.24
SMAD6O43541 SNORD63B-201ENST00000411005 70 ntBASIC1.03□□□□□ -2.24
SMAD6O43541 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
SMAD6O43541 RNU6-1194P-201ENST00000516208 104 ntBASIC1.03□□□□□ -2.24
SMAD6O43541 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.03□□□□□ -2.24
SMAD6O43541 MIR4676-201ENST00000583078 72 ntBASIC1.03□□□□□ -2.24
SMAD6O43541 AC027335.2-201ENST00000624030 375 ntBASIC1.03□□□□□ -2.24
SMAD6O43541 RNU6-369P-201ENST00000362515 102 ntBASIC1.02□□□□□ -2.25
SMAD6O43541 Y_RNA.42-201ENST00000362660 108 ntBASIC1.02□□□□□ -2.25
SMAD6O43541 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
SMAD6O43541 MIR222-201ENST00000384992 110 ntBASIC1.02□□□□□ -2.25
SMAD6O43541 MIR519C-201ENST00000385053 87 ntBASIC1.02□□□□□ -2.25
SMAD6O43541 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
SMAD6O43541 RNU6-243P-201ENST00000391140 107 ntBASIC1.02□□□□□ -2.25
SMAD6O43541 RNU7-90P-201ENST00000459216 62 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms