Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 RNU6-32P-201ENST00000383948 107 ntBASIC1.08□□□□□ -2.24
KLF4O43474 RNU6-13P-201ENST00000384248 107 ntBASIC1.08□□□□□ -2.24
KLF4O43474 RNU6-12P-201ENST00000384604 107 ntBASIC1.08□□□□□ -2.24
KLF4O43474 RNU6-41P-201ENST00000384741 107 ntBASIC1.08□□□□□ -2.24
KLF4O43474 SNORA19.1-201ENST00000410656 129 ntBASIC1.08□□□□□ -2.24
KLF4O43474 AC244098.3-201ENST00000424803 96 ntBASIC1.08□□□□□ -2.24
KLF4O43474 AC211469.2-201ENST00000605461 205 ntBASIC1.08□□□□□ -2.24
KLF4O43474 Y_RNA.107-201ENST00000363190 121 ntBASIC1.07□□□□□ -2.24
KLF4O43474 RNA5SP222-201ENST00000411039 105 ntBASIC1.07□□□□□ -2.24
KLF4O43474 ACA64.5-201ENST00000516207 127 ntBASIC1.07□□□□□ -2.24
KLF4O43474 MIR3613-201ENST00000579844 87 ntBASIC1.07□□□□□ -2.24
KLF4O43474 uc_338.16-201ENST00000621804 95 ntBASIC1.07□□□□□ -2.24
KLF4O43474 RNU6-1163P-201ENST00000364516 107 ntBASIC1.06□□□□□ -2.24
KLF4O43474 RNU6-813P-201ENST00000384691 107 ntBASIC1.06□□□□□ -2.24
KLF4O43474 SNORD63B-201ENST00000411005 70 ntBASIC1.06□□□□□ -2.24
KLF4O43474 SNORA31.14-201ENST00000516728 116 ntBASIC1.06□□□□□ -2.24
KLF4O43474 RNU6-86P-201ENST00000606534 107 ntBASIC1.06□□□□□ -2.24
KLF4O43474 MIR96-201ENST00000362288 78 ntBASIC1.05□□□□□ -2.24
KLF4O43474 Y_RNA.191-201ENST00000363972 113 ntBASIC1.05□□□□□ -2.24
KLF4O43474 RNU6-147P-201ENST00000383983 107 ntBASIC1.05□□□□□ -2.24
KLF4O43474 RNU6-110P-201ENST00000384508 104 ntBASIC1.05□□□□□ -2.24
KLF4O43474 RNU6-1254P-201ENST00000391266 104 ntBASIC1.05□□□□□ -2.24
KLF4O43474 MIR4452-201ENST00000583004 71 ntBASIC1.05□□□□□ -2.24
KLF4O43474 Y_RNA.32-201ENST00000362589 110 ntBASIC1.04□□□□□ -2.24
KLF4O43474 RNU6-1229P-201ENST00000364295 107 ntBASIC1.04□□□□□ -2.24
KLF4O43474 SNORD114-22-201ENST00000365423 72 ntBASIC1.04□□□□□ -2.24
KLF4O43474 MIR519A1-201ENST00000385257 85 ntBASIC1.04□□□□□ -2.24
KLF4O43474 RNU6-243P-201ENST00000391140 107 ntBASIC1.04□□□□□ -2.24
KLF4O43474 MIR1285-1-201ENST00000408593 84 ntBASIC1.04□□□□□ -2.24
KLF4O43474 AC097635.1-201ENST00000450678 155 ntBASIC1.04□□□□□ -2.24
KLF4O43474 TRAJ51-201ENST00000504127 63 ntBASIC1.04□□□□□ -2.24
KLF4O43474 RNU6-795P-201ENST00000516323 103 ntBASIC1.04□□□□□ -2.24
KLF4O43474 Y_RNA.705-201ENST00000516862 110 ntBASIC1.04□□□□□ -2.24
KLF4O43474 RNU6-972P-201ENST00000391208 107 ntBASIC1.03□□□□□ -2.24
KLF4O43474 Y_RNA.809-201ENST00000516058 95 ntBASIC1.03□□□□□ -2.24
KLF4O43474 MIR18A-201ENST00000362310 71 ntBASIC1.02□□□□□ -2.25
KLF4O43474 RNU6-1244P-201ENST00000363614 108 ntBASIC1.02□□□□□ -2.25
KLF4O43474 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.02□□□□□ -2.25
KLF4O43474 snoU13.18-201ENST00000459483 104 ntBASIC1.02□□□□□ -2.25
KLF4O43474 SNORA40.13-201ENST00000516379 120 ntBASIC1.02□□□□□ -2.25
KLF4O43474 RNU6-537P-201ENST00000517277 103 ntBASIC1.02□□□□□ -2.25
KLF4O43474 AC012531.4-201ENST00000616509 177 ntBASIC1.02□□□□□ -2.25
KLF4O43474 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.02□□□□□ -2.25
KLF4O43474 RNU6-153P-201ENST00000364422 104 ntBASIC1.01□□□□□ -2.25
KLF4O43474 Y_RNA.495-201ENST00000384435 112 ntBASIC1.01□□□□□ -2.25
KLF4O43474 MIR599-201ENST00000385069 95 ntBASIC1.01□□□□□ -2.25
KLF4O43474 AC244505.6-201ENST00000452829 130 ntBASIC1.01□□□□□ -2.25
KLF4O43474 PSMC1P5-201ENST00000512850 177 ntBASIC1.01□□□□□ -2.25
KLF4O43474 RNU6-109P-201ENST00000516364 107 ntBASIC1.01□□□□□ -2.25
KLF4O43474 RNU6-184P-201ENST00000516514 107 ntBASIC1.01□□□□□ -2.25
KLF4O43474 RNU6-158P-201ENST00000517104 100 ntBASIC1.01□□□□□ -2.25
KLF4O43474 MIR3678-201ENST00000578455 94 ntBASIC1.01□□□□□ -2.25
KLF4O43474 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.01□□□□□ -2.25
KLF4O43474 AC091304.10-201ENST00000641554 121 ntBASIC1.01□□□□□ -2.25
KLF4O43474 RNU1-93P-201ENST00000364704 169 ntBASIC1□□□□□ -2.25
KLF4O43474 SNORA36.2-201ENST00000384004 127 ntBASIC1□□□□□ -2.25
KLF4O43474 MIR516A2-201ENST00000384888 90 ntBASIC1□□□□□ -2.25
KLF4O43474 MIR489-201ENST00000384923 84 ntBASIC1□□□□□ -2.25
KLF4O43474 MIR516A1-201ENST00000385033 90 ntBASIC1□□□□□ -2.25
KLF4O43474 MIR4777-201ENST00000583710 86 ntBASIC1□□□□□ -2.25
KLF4O43474 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1□□□□□ -2.25
KLF4O43474 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KLF4O43474 RNA5SP245-201ENST00000364239 121 ntBASIC0.99□□□□□ -2.25
KLF4O43474 MIR181B2-201ENST00000385004 89 ntBASIC0.99□□□□□ -2.25
KLF4O43474 MIR644A-201ENST00000385262 94 ntBASIC0.99□□□□□ -2.25
KLF4O43474 RNU7-195P-201ENST00000458793 62 ntBASIC0.99□□□□□ -2.25
KLF4O43474 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.99□□□□□ -2.25
KLF4O43474 MIR4295-201ENST00000585286 85 ntBASIC0.99□□□□□ -2.25
KLF4O43474 RNU6-1260P-201ENST00000362944 107 ntBASIC0.98□□□□□ -2.25
KLF4O43474 SNORD114-27-201ENST00000363766 70 ntBASIC0.98□□□□□ -2.25
KLF4O43474 Y_RNA.467-201ENST00000384297 102 ntBASIC0.98□□□□□ -2.25
KLF4O43474 RNU6-887P-201ENST00000410660 100 ntBASIC0.98□□□□□ -2.25
KLF4O43474 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
KLF4O43474 MIR4639-201ENST00000584938 69 ntBASIC0.98□□□□□ -2.25
KLF4O43474 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.98□□□□□ -2.25
KLF4O43474 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
KLF4O43474 RNU7-106P-201ENST00000459514 67 ntBASIC0.97□□□□□ -2.25
KLF4O43474 AC103810.7-201ENST00000607821 91 ntBASIC0.97□□□□□ -2.25
KLF4O43474 AP001318.4-201ENST00000616637 121 ntBASIC0.97□□□□□ -2.25
KLF4O43474 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
KLF4O43474 SNORD115-24-201ENST00000363528 82 ntBASIC0.96□□□□□ -2.26
KLF4O43474 RNU6-644P-201ENST00000391155 98 ntBASIC0.96□□□□□ -2.26
KLF4O43474 MTATP8P2-201ENST00000435212 202 ntBASIC0.96□□□□□ -2.26
KLF4O43474 Y_RNA.677-201ENST00000516401 85 ntBASIC0.96□□□□□ -2.26
KLF4O43474 AC103810.9-201ENST00000606688 112 ntBASIC0.96□□□□□ -2.26
KLF4O43474 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.96□□□□□ -2.26
KLF4O43474 MIR6767-201ENST00000637302 66 ntBASIC0.96□□□□□ -2.26
KLF4O43474 Y_RNA.466-201ENST00000384294 113 ntBASIC0.95□□□□□ -2.26
KLF4O43474 MIR520E-201ENST00000384867 87 ntBASIC0.95□□□□□ -2.26
KLF4O43474 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.95□□□□□ -2.26
KLF4O43474 SNORD114-21-201ENST00000606412 72 ntBASIC0.95□□□□□ -2.26
KLF4O43474 MIR140-201ENST00000385282 100 ntBASIC0.94□□□□□ -2.26
KLF4O43474 RNU6-466P-201ENST00000391224 103 ntBASIC0.94□□□□□ -2.26
KLF4O43474 RNU7-61P-201ENST00000515897 61 ntBASIC0.94□□□□□ -2.26
KLF4O43474 RNU6-168P-201ENST00000516189 101 ntBASIC0.94□□□□□ -2.26
KLF4O43474 RNA5SP220-201ENST00000516298 104 ntBASIC0.94□□□□□ -2.26
KLF4O43474 MIR548Z-201ENST00000584743 97 ntBASIC0.94□□□□□ -2.26
KLF4O43474 AL078603.1-201ENST00000603824 313 ntBASIC0.94□□□□□ -2.26
KLF4O43474 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.94□□□□□ -2.26
KLF4O43474 SNORD36A-201ENST00000362874 73 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 211.7 ms