Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MSH5O43196 SNORD45.2-201ENST00000363552 72 ntBASIC4.25□□□□□ -1.73
MSH5O43196 RNU6-579P-201ENST00000516879 102 ntBASIC4.25□□□□□ -1.73
MSH5O43196 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
MSH5O43196 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
MSH5O43196 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
MSH5O43196 RNU1-141P-201ENST00000364623 158 ntBASIC4.24□□□□□ -1.73
MSH5O43196 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.24□□□□□ -1.73
MSH5O43196 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MSH5O43196 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MSH5O43196 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
MSH5O43196 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC4.23□□□□□ -1.73
MSH5O43196 Y_RNA.139-201ENST00000363464 102 ntBASIC4.23□□□□□ -1.73
MSH5O43196 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
MSH5O43196 RNU1-148P-201ENST00000384472 162 ntBASIC4.22□□□□□ -1.73
MSH5O43196 MIR125B1-201ENST00000385236 88 ntBASIC4.22□□□□□ -1.73
MSH5O43196 SCARNA17.3-201ENST00000516381 125 ntBASIC4.22□□□□□ -1.73
MSH5O43196 MIR3945-201ENST00000581853 98 ntBASIC4.22□□□□□ -1.73
MSH5O43196 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.22□□□□□ -1.73
MSH5O43196 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
MSH5O43196 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
MSH5O43196 Y_RNA.174-201ENST00000363781 105 ntBASIC4.21□□□□□ -1.74
MSH5O43196 SNORD1A-201ENST00000364968 72 ntBASIC4.21□□□□□ -1.74
MSH5O43196 MIR548E-201ENST00000408287 88 ntBASIC4.21□□□□□ -1.74
MSH5O43196 MIR4506-201ENST00000584693 77 ntBASIC4.21□□□□□ -1.74
MSH5O43196 AC073476.4-201ENST00000628409 72 ntBASIC4.21□□□□□ -1.74
MSH5O43196 MIR6733-201ENST00000635723 61 ntBASIC4.21□□□□□ -1.74
MSH5O43196 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
MSH5O43196 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC4.21□□□□□ -1.74
MSH5O43196 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.21□□□□□ -1.74
MSH5O43196 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
MSH5O43196 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
MSH5O43196 SNORD113.3-201ENST00000364630 78 ntBASIC4.2□□□□□ -1.74
MSH5O43196 RNU6-995P-201ENST00000391244 107 ntBASIC4.2□□□□□ -1.74
MSH5O43196 RNU7-40P-201ENST00000516397 64 ntBASIC4.2□□□□□ -1.74
MSH5O43196 AC012493.3-201ENST00000604494 112 ntBASIC4.19□□□□□ -1.74
MSH5O43196 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MSH5O43196 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MSH5O43196 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MSH5O43196 RNA5SP356-201ENST00000515972 94 ntBASIC4.18□□□□□ -1.74
MSH5O43196 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
MSH5O43196 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
MSH5O43196 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
MSH5O43196 SNORA46-201ENST00000384762 135 ntBASIC4.17□□□□□ -1.74
MSH5O43196 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
MSH5O43196 SNORD41.1-201ENST00000391000 69 ntBASIC4.17□□□□□ -1.74
MSH5O43196 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.17□□□□□ -1.74
MSH5O43196 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC4.17□□□□□ -1.74
MSH5O43196 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC4.17□□□□□ -1.74
MSH5O43196 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
MSH5O43196 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
MSH5O43196 RNU6-974P-201ENST00000384099 108 ntBASIC4.16□□□□□ -1.74
MSH5O43196 MIR652-201ENST00000385278 98 ntBASIC4.16□□□□□ -1.74
MSH5O43196 MIR1261-201ENST00000408659 82 ntBASIC4.16□□□□□ -1.74
MSH5O43196 AL161935.2-201ENST00000414627 60 ntBASIC4.16□□□□□ -1.74
MSH5O43196 AC015712.3-201ENST00000559380 164 ntBASIC4.16□□□□□ -1.74
MSH5O43196 AL157834.3-201ENST00000615543 103 ntBASIC4.16□□□□□ -1.74
MSH5O43196 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
MSH5O43196 AC093010.3-201ENST00000570269 15214 ntBASIC4.16□□□□□ -1.74
MSH5O43196 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
MSH5O43196 MIR516B1-201ENST00000385211 90 ntBASIC4.15□□□□□ -1.75
MSH5O43196 AC243829.3-201ENST00000622177 108 ntBASIC4.15□□□□□ -1.75
MSH5O43196 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
MSH5O43196 MIR548L-201ENST00000408303 86 ntBASIC4.14□□□□□ -1.75
MSH5O43196 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC4.14□□□□□ -1.75
MSH5O43196 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC4.13□□□□□ -1.75
MSH5O43196 RNA5SP217-201ENST00000515959 91 ntBASIC4.13□□□□□ -1.75
MSH5O43196 AC036111.3-201ENST00000526389 112 ntBASIC4.13□□□□□ -1.75
MSH5O43196 AL136317.1-201ENST00000612653 226 ntBASIC4.13□□□□□ -1.75
MSH5O43196 AL773524.1-201ENST00000614065 229 ntBASIC4.13□□□□□ -1.75
MSH5O43196 MIR4317-201ENST00000637586 65 ntBASIC4.13□□□□□ -1.75
MSH5O43196 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MSH5O43196 SNORA71.1-201ENST00000364523 117 ntBASIC4.12□□□□□ -1.75
MSH5O43196 RNU1-51P-201ENST00000365345 176 ntBASIC4.12□□□□□ -1.75
MSH5O43196 EEF1A1P41-201ENST00000414667 207 ntBASIC4.12□□□□□ -1.75
MSH5O43196 MIR4435-1-201ENST00000582552 80 ntBASIC4.12□□□□□ -1.75
MSH5O43196 U1.36-201ENST00000620684 176 ntBASIC4.12□□□□□ -1.75
MSH5O43196 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC4.11□□□□□ -1.75
MSH5O43196 RN7SL499P-201ENST00000481141 276 ntBASIC4.11□□□□□ -1.75
MSH5O43196 AL021368.2-201ENST00000606125 5352 ntBASIC4.1□□□□□ -1.75
MSH5O43196 MIR3162-201ENST00000581818 82 ntBASIC4.1□□□□□ -1.75
MSH5O43196 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
MSH5O43196 RNU1-119P-201ENST00000391122 165 ntBASIC4.09□□□□□ -1.75
MSH5O43196 UQCRHP3-201ENST00000451503 251 ntBASIC4.09□□□□□ -1.75
MSH5O43196 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.09□□□□□ -1.75
MSH5O43196 GS1-279B7.1-204ENST00000641809 378 ntBASIC4.09□□□□□ -1.75
MSH5O43196 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
MSH5O43196 AC080100.1-201ENST00000624239 5356 ntBASIC4.08□□□□□ -1.76
MSH5O43196 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
MSH5O43196 RNU6-530P-201ENST00000391180 107 ntBASIC4.08□□□□□ -1.76
MSH5O43196 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MSH5O43196 MIR4804-201ENST00000581683 73 ntBASIC4.08□□□□□ -1.76
MSH5O43196 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.08□□□□□ -1.76
MSH5O43196 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
MSH5O43196 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
MSH5O43196 MIR548AA1-201ENST00000384971 97 ntBASIC4.06□□□□□ -1.76
MSH5O43196 RNA5SP508-201ENST00000411327 119 ntBASIC4.06□□□□□ -1.76
MSH5O43196 RNU7-154P-201ENST00000516194 62 ntBASIC4.06□□□□□ -1.76
MSH5O43196 AC243829.6-201ENST00000612652 106 ntBASIC4.06□□□□□ -1.76
MSH5O43196 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 192.8 ms