Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MIR450A1-201ENST00000362262 91 ntBASIC0.78□□□□□ -2.28
PHGDHO43175 MIR96-201ENST00000362288 78 ntBASIC0.78□□□□□ -2.28
PHGDHO43175 Y_RNA.173-201ENST00000363776 113 ntBASIC0.78□□□□□ -2.28
PHGDHO43175 RNU1-93P-201ENST00000364704 169 ntBASIC0.78□□□□□ -2.28
PHGDHO43175 SNORA51.5-201ENST00000384126 131 ntBASIC0.78□□□□□ -2.28
PHGDHO43175 MIR635-201ENST00000384830 98 ntBASIC0.78□□□□□ -2.28
PHGDHO43175 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.78□□□□□ -2.28
PHGDHO43175 RNU6-109P-201ENST00000516364 107 ntBASIC0.78□□□□□ -2.28
PHGDHO43175 RNU6-184P-201ENST00000516514 107 ntBASIC0.78□□□□□ -2.28
PHGDHO43175 MIR548H5-201ENST00000580314 60 ntBASIC0.78□□□□□ -2.28
PHGDHO43175 MIR4653-201ENST00000585107 83 ntBASIC0.78□□□□□ -2.28
PHGDHO43175 RNU6-86P-201ENST00000606534 107 ntBASIC0.78□□□□□ -2.28
PHGDHO43175 MIR6767-201ENST00000637302 66 ntBASIC0.78□□□□□ -2.28
PHGDHO43175 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
PHGDHO43175 RNU6-571P-201ENST00000384128 107 ntBASIC0.77□□□□□ -2.29
PHGDHO43175 Y_RNA.567-201ENST00000384736 106 ntBASIC0.77□□□□□ -2.29
PHGDHO43175 MIR140-201ENST00000385282 100 ntBASIC0.77□□□□□ -2.29
PHGDHO43175 SNORD63B-201ENST00000411005 70 ntBASIC0.77□□□□□ -2.29
PHGDHO43175 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.77□□□□□ -2.29
PHGDHO43175 RNU6-537P-201ENST00000517277 103 ntBASIC0.77□□□□□ -2.29
PHGDHO43175 AC096720.1-201ENST00000604441 183 ntBASIC0.77□□□□□ -2.29
PHGDHO43175 AC012531.4-201ENST00000616509 177 ntBASIC0.77□□□□□ -2.29
PHGDHO43175 RNU4-36P-201ENST00000364294 144 ntBASIC0.76□□□□□ -2.29
PHGDHO43175 SNORD114-22-201ENST00000365423 72 ntBASIC0.76□□□□□ -2.29
PHGDHO43175 RNU6-756P-201ENST00000383997 107 ntBASIC0.76□□□□□ -2.29
PHGDHO43175 MIR516A2-201ENST00000384888 90 ntBASIC0.76□□□□□ -2.29
PHGDHO43175 MIR516A1-201ENST00000385033 90 ntBASIC0.76□□□□□ -2.29
PHGDHO43175 MIR1287-201ENST00000408492 90 ntBASIC0.76□□□□□ -2.29
PHGDHO43175 RNU7-10P-201ENST00000607194 63 ntBASIC0.76□□□□□ -2.29
PHGDHO43175 MIR373-201ENST00000362273 69 ntBASIC0.75□□□□□ -2.29
PHGDHO43175 RNU6-170P-201ENST00000362832 104 ntBASIC0.75□□□□□ -2.29
PHGDHO43175 Y_RNA.78-201ENST00000362970 110 ntBASIC0.75□□□□□ -2.29
PHGDHO43175 Y_RNA.226-201ENST00000364337 114 ntBASIC0.75□□□□□ -2.29
PHGDHO43175 RNU6-755P-201ENST00000364400 103 ntBASIC0.75□□□□□ -2.29
PHGDHO43175 Y_RNA.342-201ENST00000365352 113 ntBASIC0.75□□□□□ -2.29
PHGDHO43175 Y_RNA.467-201ENST00000384297 102 ntBASIC0.75□□□□□ -2.29
PHGDHO43175 Y_RNA.601-201ENST00000410500 113 ntBASIC0.75□□□□□ -2.29
PHGDHO43175 RNA5SP247-201ENST00000411181 105 ntBASIC0.75□□□□□ -2.29
PHGDHO43175 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.75□□□□□ -2.29
PHGDHO43175 AC004941.2-201ENST00000427009 228 ntBASIC0.75□□□□□ -2.29
PHGDHO43175 RNU7-195P-201ENST00000458793 62 ntBASIC0.75□□□□□ -2.29
PHGDHO43175 MIR4777-201ENST00000583710 86 ntBASIC0.75□□□□□ -2.29
PHGDHO43175 Y_RNA.224-201ENST00000364308 111 ntBASIC0.74□□□□□ -2.29
PHGDHO43175 AL606490.4-201ENST00000423117 127 ntBASIC0.74□□□□□ -2.29
PHGDHO43175 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
PHGDHO43175 Y_RNA.95-201ENST00000363079 95 ntBASIC0.73□□□□□ -2.29
PHGDHO43175 AL031737.1-201ENST00000450125 223 ntBASIC0.73□□□□□ -2.29
PHGDHO43175 SCARNA23-201ENST00000516060 130 ntBASIC0.73□□□□□ -2.29
PHGDHO43175 RNU6-135P-201ENST00000516769 101 ntBASIC0.73□□□□□ -2.29
PHGDHO43175 AC138907.6-201ENST00000568401 126 ntBASIC0.73□□□□□ -2.29
PHGDHO43175 AC138869.1-201ENST00000568623 124 ntBASIC0.73□□□□□ -2.29
PHGDHO43175 Y_RNA.57-201ENST00000362806 113 ntBASIC0.72□□□□□ -2.29
PHGDHO43175 SNORD18A-201ENST00000363753 72 ntBASIC0.72□□□□□ -2.29
PHGDHO43175 Y_RNA.221-201ENST00000364248 96 ntBASIC0.72□□□□□ -2.29
PHGDHO43175 SNORD45B-201ENST00000364617 72 ntBASIC0.72□□□□□ -2.29
PHGDHO43175 RNU6-147P-201ENST00000383983 107 ntBASIC0.72□□□□□ -2.29
PHGDHO43175 MIR520E-201ENST00000384867 87 ntBASIC0.72□□□□□ -2.29
PHGDHO43175 MIR181B2-201ENST00000385004 89 ntBASIC0.72□□□□□ -2.29
PHGDHO43175 AL590095.2-201ENST00000604136 117 ntBASIC0.72□□□□□ -2.29
PHGDHO43175 Y_RNA.10-201ENST00000362371 110 ntBASIC0.71□□□□□ -2.3
PHGDHO43175 RNU6-766P-201ENST00000362478 107 ntBASIC0.71□□□□□ -2.3
PHGDHO43175 AC244505.6-201ENST00000452829 130 ntBASIC0.71□□□□□ -2.3
PHGDHO43175 Y_RNA.809-201ENST00000516058 95 ntBASIC0.71□□□□□ -2.3
PHGDHO43175 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.71□□□□□ -2.3
PHGDHO43175 SNORD36A-201ENST00000362874 73 ntBASIC0.7□□□□□ -2.3
PHGDHO43175 SNORA36.1-201ENST00000363424 132 ntBASIC0.7□□□□□ -2.3
PHGDHO43175 SNORD115-24-201ENST00000363528 82 ntBASIC0.7□□□□□ -2.3
PHGDHO43175 RNU6-1244P-201ENST00000363614 108 ntBASIC0.7□□□□□ -2.3
PHGDHO43175 RNU6-1229P-201ENST00000364295 107 ntBASIC0.7□□□□□ -2.3
PHGDHO43175 RNU6-1113P-201ENST00000384348 107 ntBASIC0.7□□□□□ -2.3
PHGDHO43175 MIR599-201ENST00000385069 95 ntBASIC0.7□□□□□ -2.3
PHGDHO43175 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
PHGDHO43175 RNA5SP94-201ENST00000516917 108 ntBASIC0.7□□□□□ -2.3
PHGDHO43175 SNORD28-201ENST00000384706 75 ntBASIC0.69□□□□□ -2.3
PHGDHO43175 AL161932.1-201ENST00000437408 146 ntBASIC0.69□□□□□ -2.3
PHGDHO43175 RPS29P1-201ENST00000465274 159 ntBASIC0.69□□□□□ -2.3
PHGDHO43175 AL078603.1-201ENST00000603824 313 ntBASIC0.69□□□□□ -2.3
PHGDHO43175 AC103810.7-201ENST00000607821 91 ntBASIC0.69□□□□□ -2.3
PHGDHO43175 AC092634.7-201ENST00000621022 103 ntBASIC0.69□□□□□ -2.3
PHGDHO43175 AC244669.1-204ENST00000621564 178 ntBASIC0.69□□□□□ -2.3
PHGDHO43175 AC025521.1-201ENST00000621624 286 ntBASIC0.69□□□□□ -2.3
PHGDHO43175 Y_RNA.81-201ENST00000362997 102 ntBASIC0.68□□□□□ -2.3
PHGDHO43175 RNU6-945P-201ENST00000383947 107 ntBASIC0.68□□□□□ -2.3
PHGDHO43175 RNU6-813P-201ENST00000384691 107 ntBASIC0.68□□□□□ -2.3
PHGDHO43175 RNU6-644P-201ENST00000391155 98 ntBASIC0.68□□□□□ -2.3
PHGDHO43175 RNU6-1254P-201ENST00000391266 104 ntBASIC0.68□□□□□ -2.3
PHGDHO43175 RNA5SP220-201ENST00000516298 104 ntBASIC0.68□□□□□ -2.3
PHGDHO43175 RNU7-161P-201ENST00000517289 62 ntBASIC0.68□□□□□ -2.3
PHGDHO43175 CYP3A137P-201ENST00000562436 69 ntBASIC0.68□□□□□ -2.3
PHGDHO43175 MIR6788-201ENST00000618842 66 ntBASIC0.68□□□□□ -2.3
PHGDHO43175 RNU6-524P-201ENST00000384270 107 ntBASIC0.67□□□□□ -2.3
PHGDHO43175 MIR519A1-201ENST00000385257 85 ntBASIC0.67□□□□□ -2.3
PHGDHO43175 RNA5SP47-201ENST00000517230 109 ntBASIC0.67□□□□□ -2.3
PHGDHO43175 MIR4439-201ENST00000583746 80 ntBASIC0.67□□□□□ -2.3
PHGDHO43175 MIR151B-201ENST00000584249 96 ntBASIC0.67□□□□□ -2.3
PHGDHO43175 MIR4639-201ENST00000584938 69 ntBASIC0.67□□□□□ -2.3
PHGDHO43175 MIR6835-201ENST00000621552 64 ntBASIC0.67□□□□□ -2.3
PHGDHO43175 RNA5SP517-201ENST00000364724 117 ntBASIC0.66□□□□□ -2.3
PHGDHO43175 RNU6-243P-201ENST00000391140 107 ntBASIC0.66□□□□□ -2.3
PHGDHO43175 AC097635.1-201ENST00000450678 155 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms