Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 MIR1255B1-201ENST00000636325 63 ntBASIC-0.02□□□□□ -2.41
MSH4O15457 RNU6-161P-201ENST00000363051 106 ntBASIC-0.03□□□□□ -2.41
MSH4O15457 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.03□□□□□ -2.41
MSH4O15457 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.03□□□□□ -2.41
MSH4O15457 MIR145-201ENST00000384967 88 ntBASIC-0.03□□□□□ -2.41
MSH4O15457 MIR610-201ENST00000385139 96 ntBASIC-0.03□□□□□ -2.41
MSH4O15457 MIR501-201ENST00000390204 84 ntBASIC-0.03□□□□□ -2.41
MSH4O15457 RNU6-394P-201ENST00000410735 107 ntBASIC-0.03□□□□□ -2.41
MSH4O15457 RN7SKP19-201ENST00000516016 252 ntBASIC-0.03□□□□□ -2.41
MSH4O15457 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.03□□□□□ -2.41
MSH4O15457 RNU6-782P-201ENST00000516852 104 ntBASIC-0.03□□□□□ -2.41
MSH4O15457 MIR5706-201ENST00000579841 80 ntBASIC-0.03□□□□□ -2.41
MSH4O15457 MIR548AD-201ENST00000584780 82 ntBASIC-0.03□□□□□ -2.41
MSH4O15457 uc_338.28-201ENST00000612082 187 ntBASIC-0.03□□□□□ -2.41
MSH4O15457 SNORD115-19-201ENST00000363098 82 ntBASIC-0.04□□□□□ -2.42
MSH4O15457 SNORD115-18-201ENST00000363293 82 ntBASIC-0.04□□□□□ -2.42
MSH4O15457 SNORD115-17-201ENST00000364612 82 ntBASIC-0.04□□□□□ -2.42
MSH4O15457 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.04□□□□□ -2.42
MSH4O15457 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.04□□□□□ -2.42
MSH4O15457 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.04□□□□□ -2.42
MSH4O15457 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.04□□□□□ -2.42
MSH4O15457 AP001328.1-201ENST00000528550 176 ntBASIC-0.04□□□□□ -2.42
MSH4O15457 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.04□□□□□ -2.42
MSH4O15457 MIR4743-201ENST00000584576 69 ntBASIC-0.04□□□□□ -2.42
MSH4O15457 RNU6-524P-201ENST00000384270 107 ntBASIC-0.05□□□□□ -2.42
MSH4O15457 MIR516A2-201ENST00000384888 90 ntBASIC-0.05□□□□□ -2.42
MSH4O15457 MIR516A1-201ENST00000385033 90 ntBASIC-0.05□□□□□ -2.42
MSH4O15457 SNORA7.5-201ENST00000410672 110 ntBASIC-0.05□□□□□ -2.42
MSH4O15457 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.05□□□□□ -2.42
MSH4O15457 RNA5SP285-201ENST00000516619 119 ntBASIC-0.05□□□□□ -2.42
MSH4O15457 RNU6-850P-201ENST00000516934 103 ntBASIC-0.05□□□□□ -2.42
MSH4O15457 MTND5P41-201ENST00000517498 206 ntBASIC-0.05□□□□□ -2.42
MSH4O15457 AC141557.1-201ENST00000540982 400 ntBASIC-0.05□□□□□ -2.42
MSH4O15457 NAMPTP3-201ENST00000569273 224 ntBASIC-0.05□□□□□ -2.42
MSH4O15457 MIR3144-201ENST00000579460 79 ntBASIC-0.05□□□□□ -2.42
MSH4O15457 MIR548X2-201ENST00000579776 100 ntBASIC-0.05□□□□□ -2.42
MSH4O15457 RNU6-170P-201ENST00000362832 104 ntBASIC-0.06□□□□□ -2.42
MSH4O15457 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.06□□□□□ -2.42
MSH4O15457 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.06□□□□□ -2.42
MSH4O15457 RNU6-571P-201ENST00000384128 107 ntBASIC-0.06□□□□□ -2.42
MSH4O15457 MIR329-2-201ENST00000385029 84 ntBASIC-0.06□□□□□ -2.42
MSH4O15457 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
MSH4O15457 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.06□□□□□ -2.42
MSH4O15457 RNA5SP484-201ENST00000458857 111 ntBASIC-0.06□□□□□ -2.42
MSH4O15457 RNU6-781P-201ENST00000516377 101 ntBASIC-0.06□□□□□ -2.42
MSH4O15457 MTND5P40-201ENST00000559945 246 ntBASIC-0.06□□□□□ -2.42
MSH4O15457 MIR3163-201ENST00000581592 73 ntBASIC-0.06□□□□□ -2.42
MSH4O15457 MIR3920-201ENST00000581751 86 ntBASIC-0.06□□□□□ -2.42
MSH4O15457 AP001340.1-201ENST00000624405 217 ntBASIC-0.06□□□□□ -2.42
MSH4O15457 AC073869.9-201ENST00000641610 120 ntBASIC-0.06□□□□□ -2.42
MSH4O15457 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.07□□□□□ -2.42
MSH4O15457 RNU6-235P-201ENST00000362644 107 ntBASIC-0.07□□□□□ -2.42
MSH4O15457 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.07□□□□□ -2.42
MSH4O15457 RNU6-652P-201ENST00000365488 107 ntBASIC-0.07□□□□□ -2.42
MSH4O15457 RNU6-756P-201ENST00000383997 107 ntBASIC-0.07□□□□□ -2.42
MSH4O15457 RNU6-929P-201ENST00000384429 107 ntBASIC-0.07□□□□□ -2.42
MSH4O15457 snosnR66.1-201ENST00000391095 99 ntBASIC-0.07□□□□□ -2.42
MSH4O15457 MIR892B-201ENST00000401279 77 ntBASIC-0.07□□□□□ -2.42
MSH4O15457 SNORD110-201ENST00000408189 75 ntBASIC-0.07□□□□□ -2.42
MSH4O15457 AC006210.1-201ENST00000424882 111 ntBASIC-0.07□□□□□ -2.42
MSH4O15457 RNU7-13P-201ENST00000516413 62 ntBASIC-0.07□□□□□ -2.42
MSH4O15457 RNU6-182P-201ENST00000516970 105 ntBASIC-0.07□□□□□ -2.42
MSH4O15457 MIR4677-201ENST00000584153 80 ntBASIC-0.07□□□□□ -2.42
MSH4O15457 MIR3925-201ENST00000584674 77 ntBASIC-0.07□□□□□ -2.42
MSH4O15457 AC090425.1-201ENST00000610007 140 ntBASIC-0.07□□□□□ -2.42
MSH4O15457 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.08□□□□□ -2.42
MSH4O15457 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.08□□□□□ -2.42
MSH4O15457 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.08□□□□□ -2.42
MSH4O15457 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.08□□□□□ -2.42
MSH4O15457 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.08□□□□□ -2.42
MSH4O15457 MIR106A-201ENST00000384870 81 ntBASIC-0.08□□□□□ -2.42
MSH4O15457 MIR569-201ENST00000385228 96 ntBASIC-0.08□□□□□ -2.42
MSH4O15457 MIR759-201ENST00000390224 91 ntBASIC-0.08□□□□□ -2.42
MSH4O15457 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.08□□□□□ -2.42
MSH4O15457 U7.6-201ENST00000610841 64 ntBASIC-0.08□□□□□ -2.42
MSH4O15457 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.08□□□□□ -2.42
MSH4O15457 AL512310.12-203ENST00000640543 90 ntBASIC-0.08□□□□□ -2.42
MSH4O15457 RNU6-509P-201ENST00000363519 107 ntBASIC-0.09□□□□□ -2.42
MSH4O15457 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.09□□□□□ -2.42
MSH4O15457 RNU6-647P-201ENST00000364243 107 ntBASIC-0.09□□□□□ -2.42
MSH4O15457 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.09□□□□□ -2.42
MSH4O15457 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.09□□□□□ -2.42
MSH4O15457 RNA5SP163-201ENST00000410304 99 ntBASIC-0.09□□□□□ -2.42
MSH4O15457 RNA5SP136-201ENST00000410906 107 ntBASIC-0.09□□□□□ -2.42
MSH4O15457 HMGN2P22-201ENST00000427588 175 ntBASIC-0.09□□□□□ -2.42
MSH4O15457 AL161932.1-201ENST00000437408 146 ntBASIC-0.09□□□□□ -2.42
MSH4O15457 AL158147.1-201ENST00000443970 75 ntBASIC-0.09□□□□□ -2.42
MSH4O15457 RNU7-165P-201ENST00000458864 60 ntBASIC-0.09□□□□□ -2.42
MSH4O15457 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.09□□□□□ -2.42
MSH4O15457 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.1□□□□□ -2.43
MSH4O15457 RNU6-302P-201ENST00000365249 107 ntBASIC-0.1□□□□□ -2.43
MSH4O15457 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.1□□□□□ -2.43
MSH4O15457 SPINT5P-201ENST00000448174 155 ntBASIC-0.1□□□□□ -2.43
MSH4O15457 RNU6-426P-201ENST00000516464 97 ntBASIC-0.1□□□□□ -2.43
MSH4O15457 RNU6-180P-201ENST00000516697 61 ntBASIC-0.1□□□□□ -2.43
MSH4O15457 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.1□□□□□ -2.43
MSH4O15457 MIR548AG2-201ENST00000581228 64 ntBASIC-0.1□□□□□ -2.43
MSH4O15457 FTX_2.1-201ENST00000618816 94 ntBASIC-0.1□□□□□ -2.43
MSH4O15457 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.11□□□□□ -2.43
MSH4O15457 RNU6-886P-201ENST00000384319 105 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms