Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 MIR548I2-201ENST00000408348 149 ntBASIC0.66□□□□□ -2.3
CHL1O00533 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.66□□□□□ -2.3
CHL1O00533 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.66□□□□□ -2.3
CHL1O00533 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.66□□□□□ -2.3
CHL1O00533 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
CHL1O00533 Y_RNA.49-201ENST00000362714 112 ntBASIC0.65□□□□□ -2.31
CHL1O00533 SNORD38.2-201ENST00000384470 69 ntBASIC0.65□□□□□ -2.31
CHL1O00533 MIR577-201ENST00000385196 96 ntBASIC0.65□□□□□ -2.31
CHL1O00533 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.65□□□□□ -2.31
CHL1O00533 RNU4-54P-201ENST00000516428 129 ntBASIC0.65□□□□□ -2.31
CHL1O00533 RNU6-412P-201ENST00000516434 106 ntBASIC0.65□□□□□ -2.31
CHL1O00533 AL442128.1-201ENST00000615151 90 ntBASIC0.65□□□□□ -2.31
CHL1O00533 SNORD38.1-201ENST00000363863 68 ntBASIC0.64□□□□□ -2.31
CHL1O00533 RNU6-1107P-201ENST00000364817 104 ntBASIC0.64□□□□□ -2.31
CHL1O00533 Y_RNA.323-201ENST00000365157 109 ntBASIC0.64□□□□□ -2.31
CHL1O00533 SNRPGP12-201ENST00000449481 213 ntBASIC0.64□□□□□ -2.31
CHL1O00533 TRAJ51-201ENST00000504127 63 ntBASIC0.64□□□□□ -2.31
CHL1O00533 MTND5P40-201ENST00000559945 246 ntBASIC0.64□□□□□ -2.31
CHL1O00533 MIR548H5-201ENST00000580314 60 ntBASIC0.64□□□□□ -2.31
CHL1O00533 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
CHL1O00533 RNU6-1290P-201ENST00000362957 109 ntBASIC0.63□□□□□ -2.31
CHL1O00533 Y_RNA.273-201ENST00000364703 102 ntBASIC0.63□□□□□ -2.31
CHL1O00533 RNU6-1014P-201ENST00000383940 103 ntBASIC0.63□□□□□ -2.31
CHL1O00533 RNU6-571P-201ENST00000384128 107 ntBASIC0.63□□□□□ -2.31
CHL1O00533 MIR635-201ENST00000384830 98 ntBASIC0.63□□□□□ -2.31
CHL1O00533 SPINT5P-201ENST00000448174 155 ntBASIC0.63□□□□□ -2.31
CHL1O00533 RNU6-469P-201ENST00000516253 101 ntBASIC0.63□□□□□ -2.31
CHL1O00533 RNU6-850P-201ENST00000516934 103 ntBASIC0.63□□□□□ -2.31
CHL1O00533 MIR4694-201ENST00000578534 80 ntBASIC0.63□□□□□ -2.31
CHL1O00533 SNORD18A-201ENST00000363753 72 ntBASIC0.62□□□□□ -2.31
CHL1O00533 Y_RNA.377-201ENST00000365644 108 ntBASIC0.62□□□□□ -2.31
CHL1O00533 MIR140-201ENST00000385282 100 ntBASIC0.62□□□□□ -2.31
CHL1O00533 MIR548G-201ENST00000408442 89 ntBASIC0.62□□□□□ -2.31
CHL1O00533 AL157398.1-201ENST00000452981 186 ntBASIC0.62□□□□□ -2.31
CHL1O00533 RNU6-589P-201ENST00000516485 107 ntBASIC0.62□□□□□ -2.31
CHL1O00533 AC018659.1-201ENST00000551083 169 ntBASIC0.62□□□□□ -2.31
CHL1O00533 AC138869.1-201ENST00000568623 124 ntBASIC0.62□□□□□ -2.31
CHL1O00533 MIR3613-201ENST00000579844 87 ntBASIC0.62□□□□□ -2.31
CHL1O00533 RNU6-90P-201ENST00000606352 106 ntBASIC0.62□□□□□ -2.31
CHL1O00533 RNU7-10P-201ENST00000607194 63 ntBASIC0.62□□□□□ -2.31
CHL1O00533 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.62□□□□□ -2.31
CHL1O00533 RNY3P2-201ENST00000362918 102 ntBASIC0.61□□□□□ -2.31
CHL1O00533 RNU6-832P-201ENST00000363319 107 ntBASIC0.61□□□□□ -2.31
CHL1O00533 RNU6-1099P-201ENST00000363533 107 ntBASIC0.61□□□□□ -2.31
CHL1O00533 Y_RNA.291-201ENST00000364886 113 ntBASIC0.61□□□□□ -2.31
CHL1O00533 Y_RNA.629-201ENST00000411368 105 ntBASIC0.61□□□□□ -2.31
CHL1O00533 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.61□□□□□ -2.31
CHL1O00533 MIR548AI-201ENST00000579940 88 ntBASIC0.61□□□□□ -2.31
CHL1O00533 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
CHL1O00533 RNU6-170P-201ENST00000362832 104 ntBASIC0.6□□□□□ -2.31
CHL1O00533 SNORD63B-201ENST00000411005 70 ntBASIC0.6□□□□□ -2.31
CHL1O00533 RNU7-106P-201ENST00000459514 67 ntBASIC0.6□□□□□ -2.31
CHL1O00533 RNU6-229P-201ENST00000516614 102 ntBASIC0.6□□□□□ -2.31
CHL1O00533 RNA5SP94-201ENST00000516917 108 ntBASIC0.6□□□□□ -2.31
CHL1O00533 Y_RNA.173-201ENST00000363776 113 ntBASIC0.59□□□□□ -2.31
CHL1O00533 RNU6-1325P-201ENST00000364905 105 ntBASIC0.59□□□□□ -2.31
CHL1O00533 Y_RNA.342-201ENST00000365352 113 ntBASIC0.59□□□□□ -2.31
CHL1O00533 AC244505.6-201ENST00000452829 130 ntBASIC0.59□□□□□ -2.31
CHL1O00533 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.59□□□□□ -2.31
CHL1O00533 RNU6-135P-201ENST00000516769 101 ntBASIC0.59□□□□□ -2.31
CHL1O00533 Y_RNA.709-201ENST00000516952 92 ntBASIC0.59□□□□□ -2.31
CHL1O00533 AC141557.1-201ENST00000540982 400 ntBASIC0.59□□□□□ -2.31
CHL1O00533 AC096720.1-201ENST00000604441 183 ntBASIC0.59□□□□□ -2.31
CHL1O00533 RNU6-945P-201ENST00000383947 107 ntBASIC0.58□□□□□ -2.32
CHL1O00533 SNORD28-201ENST00000384706 75 ntBASIC0.58□□□□□ -2.32
CHL1O00533 Y_RNA.567-201ENST00000384736 106 ntBASIC0.58□□□□□ -2.32
CHL1O00533 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.58□□□□□ -2.32
CHL1O00533 RN7SKP12-201ENST00000516275 143 ntBASIC0.58□□□□□ -2.32
CHL1O00533 AC243829.3-201ENST00000622177 108 ntBASIC0.58□□□□□ -2.32
CHL1O00533 RNU6-1163P-201ENST00000364516 107 ntBASIC0.57□□□□□ -2.32
CHL1O00533 MIR516A2-201ENST00000384888 90 ntBASIC0.57□□□□□ -2.32
CHL1O00533 MIR516A1-201ENST00000385033 90 ntBASIC0.57□□□□□ -2.32
CHL1O00533 AC114737.2-201ENST00000421583 173 ntBASIC0.57□□□□□ -2.32
CHL1O00533 RNU7-195P-201ENST00000458793 62 ntBASIC0.57□□□□□ -2.32
CHL1O00533 RNA5SP47-201ENST00000517230 109 ntBASIC0.57□□□□□ -2.32
CHL1O00533 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.57□□□□□ -2.32
CHL1O00533 MIR4639-201ENST00000584938 69 ntBASIC0.57□□□□□ -2.32
CHL1O00533 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.57□□□□□ -2.32
CHL1O00533 SNORA36.1-201ENST00000363424 132 ntBASIC0.56□□□□□ -2.32
CHL1O00533 SNORD115-24-201ENST00000363528 82 ntBASIC0.56□□□□□ -2.32
CHL1O00533 Y_RNA.163-201ENST00000363702 113 ntBASIC0.56□□□□□ -2.32
CHL1O00533 RNA5SP517-201ENST00000364724 117 ntBASIC0.56□□□□□ -2.32
CHL1O00533 RNU6-106P-201ENST00000384405 107 ntBASIC0.56□□□□□ -2.32
CHL1O00533 MIR599-201ENST00000385069 95 ntBASIC0.56□□□□□ -2.32
CHL1O00533 MIR519A1-201ENST00000385257 85 ntBASIC0.56□□□□□ -2.32
CHL1O00533 SNORA19.1-201ENST00000410656 129 ntBASIC0.56□□□□□ -2.32
CHL1O00533 Y_RNA.659-201ENST00000515994 113 ntBASIC0.56□□□□□ -2.32
CHL1O00533 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
CHL1O00533 AC092634.7-201ENST00000621022 103 ntBASIC0.56□□□□□ -2.32
CHL1O00533 AC244669.1-204ENST00000621564 178 ntBASIC0.56□□□□□ -2.32
CHL1O00533 RNU6-1229P-201ENST00000364295 107 ntBASIC0.55□□□□□ -2.32
CHL1O00533 SNORD20-201ENST00000384550 80 ntBASIC0.55□□□□□ -2.32
CHL1O00533 RNY4P18-201ENST00000391107 89 ntBASIC0.55□□□□□ -2.32
CHL1O00533 AC109327.2-201ENST00000448339 378 ntBASIC0.55□□□□□ -2.32
CHL1O00533 AC097635.1-201ENST00000450678 155 ntBASIC0.55□□□□□ -2.32
CHL1O00533 Y_RNA.809-201ENST00000516058 95 ntBASIC0.55□□□□□ -2.32
CHL1O00533 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.55□□□□□ -2.32
CHL1O00533 Y_RNA.57-201ENST00000362806 113 ntBASIC0.54□□□□□ -2.32
CHL1O00533 Y_RNA.221-201ENST00000364248 96 ntBASIC0.54□□□□□ -2.32
CHL1O00533 RNU4-36P-201ENST00000364294 144 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms