Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MTND5P40-201ENST00000559945 246 ntBASIC-0.37□□□□□ -2.47
DDX39AO00148 MIR8064-201ENST00000612863 90 ntBASIC-0.37□□□□□ -2.47
DDX39AO00148 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.37□□□□□ -2.47
DDX39AO00148 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.38□□□□□ -2.47
DDX39AO00148 RNU4-84P-201ENST00000364200 139 ntBASIC-0.38□□□□□ -2.47
DDX39AO00148 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.38□□□□□ -2.47
DDX39AO00148 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.38□□□□□ -2.47
DDX39AO00148 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.38□□□□□ -2.47
DDX39AO00148 MIR516B1-201ENST00000385211 90 ntBASIC-0.38□□□□□ -2.47
DDX39AO00148 AL118496.2-201ENST00000448300 230 ntBASIC-0.38□□□□□ -2.47
DDX39AO00148 RNU7-106P-201ENST00000459514 67 ntBASIC-0.38□□□□□ -2.47
DDX39AO00148 RNU6-327P-201ENST00000516270 127 ntBASIC-0.38□□□□□ -2.47
DDX39AO00148 RNU6-758P-201ENST00000516292 89 ntBASIC-0.38□□□□□ -2.47
DDX39AO00148 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.38□□□□□ -2.47
DDX39AO00148 AC108081.1-201ENST00000604358 221 ntBASIC-0.38□□□□□ -2.47
DDX39AO00148 U4.1-201ENST00000620349 87 ntBASIC-0.38□□□□□ -2.47
DDX39AO00148 RNU1-141P-201ENST00000364623 158 ntBASIC-0.39□□□□□ -2.47
DDX39AO00148 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.39□□□□□ -2.47
DDX39AO00148 MIR34C-201ENST00000384831 77 ntBASIC-0.39□□□□□ -2.47
DDX39AO00148 AC109327.2-201ENST00000448339 378 ntBASIC-0.39□□□□□ -2.47
DDX39AO00148 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.39□□□□□ -2.47
DDX39AO00148 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.4□□□□□ -2.47
DDX39AO00148 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.4□□□□□ -2.47
DDX39AO00148 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.4□□□□□ -2.47
DDX39AO00148 RNU6-850P-201ENST00000516934 103 ntBASIC-0.4□□□□□ -2.47
DDX39AO00148 RNA5SP368-201ENST00000364298 116 ntBASIC-0.41□□□□□ -2.48
DDX39AO00148 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.41□□□□□ -2.48
DDX39AO00148 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.41□□□□□ -2.48
DDX39AO00148 AC130289.1-201ENST00000577321 73 ntBASIC-0.41□□□□□ -2.48
DDX39AO00148 MIR548AG2-201ENST00000581228 64 ntBASIC-0.41□□□□□ -2.48
DDX39AO00148 AC087741.2-201ENST00000619415 172 ntBASIC-0.41□□□□□ -2.48
DDX39AO00148 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.42□□□□□ -2.48
DDX39AO00148 SNORD49B-201ENST00000365172 72 ntBASIC-0.42□□□□□ -2.48
DDX39AO00148 MIR604-201ENST00000384880 94 ntBASIC-0.42□□□□□ -2.48
DDX39AO00148 MIR519E-201ENST00000385075 84 ntBASIC-0.42□□□□□ -2.48
DDX39AO00148 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.42□□□□□ -2.48
DDX39AO00148 RNU7-6P-201ENST00000516845 62 ntBASIC-0.42□□□□□ -2.48
DDX39AO00148 MIR4493-201ENST00000584016 73 ntBASIC-0.42□□□□□ -2.48
DDX39AO00148 AC072026.1-201ENST00000605023 201 ntBASIC-0.42□□□□□ -2.48
DDX39AO00148 MIR3666-201ENST00000607845 111 ntBASIC-0.42□□□□□ -2.48
DDX39AO00148 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.42□□□□□ -2.48
DDX39AO00148 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.43□□□□□ -2.48
DDX39AO00148 SNORD115-44-201ENST00000365391 82 ntBASIC-0.43□□□□□ -2.48
DDX39AO00148 MIR516A2-201ENST00000384888 90 ntBASIC-0.43□□□□□ -2.48
DDX39AO00148 MIR516A1-201ENST00000385033 90 ntBASIC-0.43□□□□□ -2.48
DDX39AO00148 MIR4503-201ENST00000582187 83 ntBASIC-0.43□□□□□ -2.48
DDX39AO00148 MIR4473-201ENST00000583731 91 ntBASIC-0.43□□□□□ -2.48
DDX39AO00148 RN7SL660P-201ENST00000614852 299 ntBASIC-0.43□□□□□ -2.48
DDX39AO00148 SNORD115-19-201ENST00000363098 82 ntBASIC-0.44□□□□□ -2.48
DDX39AO00148 SNORD115-18-201ENST00000363293 82 ntBASIC-0.44□□□□□ -2.48
DDX39AO00148 SNORD115-17-201ENST00000364612 82 ntBASIC-0.44□□□□□ -2.48
DDX39AO00148 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.44□□□□□ -2.48
DDX39AO00148 MIR617-201ENST00000385030 97 ntBASIC-0.44□□□□□ -2.48
DDX39AO00148 AC093423.1-201ENST00000440817 142 ntBASIC-0.44□□□□□ -2.48
DDX39AO00148 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.44□□□□□ -2.48
DDX39AO00148 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.44□□□□□ -2.48
DDX39AO00148 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.44□□□□□ -2.48
DDX39AO00148 RNU6-521P-201ENST00000516663 105 ntBASIC-0.44□□□□□ -2.48
DDX39AO00148 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.44□□□□□ -2.48
DDX39AO00148 AC069503.3-201ENST00000618674 145 ntBASIC-0.44□□□□□ -2.48
DDX39AO00148 MIR101-1-201ENST00000362265 75 ntBASIC-0.45□□□□□ -2.48
DDX39AO00148 SNORD38.2-201ENST00000384470 69 ntBASIC-0.45□□□□□ -2.48
DDX39AO00148 MT-TI-201ENST00000387365 69 ntBASIC-0.45□□□□□ -2.48
DDX39AO00148 YWHAEP2-201ENST00000580066 112 ntBASIC-0.45□□□□□ -2.48
DDX39AO00148 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.46□□□□□ -2.48
DDX39AO00148 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.46□□□□□ -2.48
DDX39AO00148 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.46□□□□□ -2.48
DDX39AO00148 RNU6-196P-201ENST00000384315 107 ntBASIC-0.46□□□□□ -2.48
DDX39AO00148 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.46□□□□□ -2.48
DDX39AO00148 RNA5SP300-201ENST00000391197 107 ntBASIC-0.46□□□□□ -2.48
DDX39AO00148 MTND3P2-201ENST00000438452 342 ntBASIC-0.46□□□□□ -2.48
DDX39AO00148 RNU6-320P-201ENST00000516511 106 ntBASIC-0.46□□□□□ -2.48
DDX39AO00148 RNU7-188P-201ENST00000517063 64 ntBASIC-0.46□□□□□ -2.48
DDX39AO00148 MIR3163-201ENST00000581592 73 ntBASIC-0.46□□□□□ -2.48
DDX39AO00148 MIR6507-201ENST00000613630 70 ntBASIC-0.46□□□□□ -2.48
DDX39AO00148 AC141273.2-201ENST00000618989 130 ntBASIC-0.46□□□□□ -2.48
DDX39AO00148 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.47□□□□□ -2.48
DDX39AO00148 RNU6-694P-201ENST00000364071 147 ntBASIC-0.47□□□□□ -2.48
DDX39AO00148 U8.6-201ENST00000364939 135 ntBASIC-0.47□□□□□ -2.48
DDX39AO00148 MIR181B2-201ENST00000385004 89 ntBASIC-0.47□□□□□ -2.48
DDX39AO00148 AC244250.2-201ENST00000418731 148 ntBASIC-0.47□□□□□ -2.48
DDX39AO00148 IGKV1-22-201ENST00000524313 326 ntBASIC-0.47□□□□□ -2.48
DDX39AO00148 AP002392.1-201ENST00000537692 208 ntBASIC-0.47□□□□□ -2.48
DDX39AO00148 uc_338.10-201ENST00000621872 182 ntBASIC-0.47□□□□□ -2.48
DDX39AO00148 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.47□□□□□ -2.48
DDX39AO00148 AC021753.1-201ENST00000635724 168 ntBASIC-0.47□□□□□ -2.48
DDX39AO00148 AL162726.3-218ENST00000636401 95 ntBASIC-0.47□□□□□ -2.48
DDX39AO00148 RNU4-11P-201ENST00000365287 132 ntBASIC-0.48□□□□□ -2.49
DDX39AO00148 RNU6-811P-201ENST00000384069 107 ntBASIC-0.48□□□□□ -2.49
DDX39AO00148 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.48□□□□□ -2.49
DDX39AO00148 RNA5SP451-201ENST00000410588 110 ntBASIC-0.48□□□□□ -2.49
DDX39AO00148 RNA5SP25-201ENST00000410815 110 ntBASIC-0.48□□□□□ -2.49
DDX39AO00148 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.48□□□□□ -2.49
DDX39AO00148 MIR2113-201ENST00000459007 91 ntBASIC-0.48□□□□□ -2.49
DDX39AO00148 HAR1A.1-201ENST00000459583 118 ntBASIC-0.48□□□□□ -2.49
DDX39AO00148 RNA5SP476-201ENST00000516613 103 ntBASIC-0.48□□□□□ -2.49
DDX39AO00148 MIR4460-201ENST00000577862 86 ntBASIC-0.48□□□□□ -2.49
DDX39AO00148 MIR3121-201ENST00000579680 77 ntBASIC-0.48□□□□□ -2.49
DDX39AO00148 RNU7-197P-201ENST00000458836 62 ntBASIC-0.49□□□□□ -2.49
DDX39AO00148 snoU13.19-201ENST00000459148 104 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms