Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 RNU6-813P-201ENST00000384691 107 ntBASIC1.33□□□□□ -2.2
LRIT1Q9P2V4 Y_RNA.588-201ENST00000391254 102 ntBASIC1.33□□□□□ -2.2
LRIT1Q9P2V4 RNU6-887P-201ENST00000410660 100 ntBASIC1.33□□□□□ -2.2
LRIT1Q9P2V4 RNY4P29-201ENST00000410801 97 ntBASIC1.33□□□□□ -2.2
LRIT1Q9P2V4 SPINT5P-201ENST00000448174 155 ntBASIC1.33□□□□□ -2.2
LRIT1Q9P2V4 RNA5SP480-201ENST00000516840 109 ntBASIC1.33□□□□□ -2.2
LRIT1Q9P2V4 AC036111.3-201ENST00000526389 112 ntBASIC1.33□□□□□ -2.2
LRIT1Q9P2V4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
LRIT1Q9P2V4 Y_RNA.567-201ENST00000384736 106 ntBASIC1.32□□□□□ -2.2
LRIT1Q9P2V4 MT-TF-201ENST00000387314 71 ntBASIC1.32□□□□□ -2.2
LRIT1Q9P2V4 RNU4-83P-201ENST00000410863 133 ntBASIC1.32□□□□□ -2.2
LRIT1Q9P2V4 SNORD83.1-201ENST00000411362 77 ntBASIC1.32□□□□□ -2.2
LRIT1Q9P2V4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.32□□□□□ -2.2
LRIT1Q9P2V4 MIR4491-201ENST00000581087 68 ntBASIC1.32□□□□□ -2.2
LRIT1Q9P2V4 MIR4439-201ENST00000583746 80 ntBASIC1.32□□□□□ -2.2
LRIT1Q9P2V4 RNU6-90P-201ENST00000606352 106 ntBASIC1.32□□□□□ -2.2
LRIT1Q9P2V4 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.32□□□□□ -2.2
LRIT1Q9P2V4 Y_RNA.17-201ENST00000362433 111 ntBASIC1.31□□□□□ -2.2
LRIT1Q9P2V4 Y_RNA.119-201ENST00000363301 96 ntBASIC1.31□□□□□ -2.2
LRIT1Q9P2V4 SNORD58A-201ENST00000383875 65 ntBASIC1.31□□□□□ -2.2
LRIT1Q9P2V4 SNORA25.16-201ENST00000516741 121 ntBASIC1.31□□□□□ -2.2
LRIT1Q9P2V4 AC019288.1-201ENST00000557918 224 ntBASIC1.31□□□□□ -2.2
LRIT1Q9P2V4 AC023827.1-201ENST00000569247 97 ntBASIC1.31□□□□□ -2.2
LRIT1Q9P2V4 MIR4500-201ENST00000579472 76 ntBASIC1.31□□□□□ -2.2
LRIT1Q9P2V4 RNU6-972P-201ENST00000391208 107 ntBASIC1.3□□□□□ -2.2
LRIT1Q9P2V4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.3□□□□□ -2.2
LRIT1Q9P2V4 BX276092.1-201ENST00000427368 251 ntBASIC1.3□□□□□ -2.2
LRIT1Q9P2V4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.3□□□□□ -2.2
LRIT1Q9P2V4 SNORA72.7-201ENST00000516349 94 ntBASIC1.3□□□□□ -2.2
LRIT1Q9P2V4 RNA5SP61-201ENST00000516453 100 ntBASIC1.3□□□□□ -2.2
LRIT1Q9P2V4 MTND5P40-201ENST00000559945 246 ntBASIC1.3□□□□□ -2.2
LRIT1Q9P2V4 MIR6078-201ENST00000611069 100 ntBASIC1.3□□□□□ -2.2
LRIT1Q9P2V4 AC025521.1-201ENST00000621624 286 ntBASIC1.3□□□□□ -2.2
LRIT1Q9P2V4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
LRIT1Q9P2V4 RNU1-36P-201ENST00000365130 165 ntBASIC1.29□□□□□ -2.2
LRIT1Q9P2V4 RNU6-1134P-201ENST00000365156 101 ntBASIC1.29□□□□□ -2.2
LRIT1Q9P2V4 MIR181B2-201ENST00000385004 89 ntBASIC1.29□□□□□ -2.2
LRIT1Q9P2V4 RNU6-910P-201ENST00000390844 107 ntBASIC1.29□□□□□ -2.2
LRIT1Q9P2V4 MIR1302-4-201ENST00000408701 150 ntBASIC1.29□□□□□ -2.2
LRIT1Q9P2V4 RNU6-592P-201ENST00000411333 103 ntBASIC1.29□□□□□ -2.2
LRIT1Q9P2V4 SNRPGP12-201ENST00000449481 213 ntBASIC1.29□□□□□ -2.2
LRIT1Q9P2V4 RNU1-123P-201ENST00000458950 160 ntBASIC1.29□□□□□ -2.2
LRIT1Q9P2V4 RNU7-21P-201ENST00000459430 62 ntBASIC1.29□□□□□ -2.2
LRIT1Q9P2V4 RNU6-531P-201ENST00000516694 104 ntBASIC1.29□□□□□ -2.2
LRIT1Q9P2V4 RNU6-267P-201ENST00000516714 103 ntBASIC1.29□□□□□ -2.2
LRIT1Q9P2V4 AC008163.1-202ENST00000636004 2889 ntBASIC1.29□□□□□ -2.2
LRIT1Q9P2V4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
LRIT1Q9P2V4 MIR494-201ENST00000349529 81 ntBASIC1.28□□□□□ -2.2
LRIT1Q9P2V4 RNA5SP327-201ENST00000362494 101 ntBASIC1.28□□□□□ -2.2
LRIT1Q9P2V4 RNU6-369P-201ENST00000362515 102 ntBASIC1.28□□□□□ -2.2
LRIT1Q9P2V4 SNORD113.3-201ENST00000364630 78 ntBASIC1.28□□□□□ -2.2
LRIT1Q9P2V4 SNORA25.8-201ENST00000364831 128 ntBASIC1.28□□□□□ -2.2
LRIT1Q9P2V4 SNORA26.2-201ENST00000390922 122 ntBASIC1.28□□□□□ -2.2
LRIT1Q9P2V4 MIR18B-201ENST00000454574 71 ntBASIC1.28□□□□□ -2.2
LRIT1Q9P2V4 RNU7-185P-201ENST00000459215 60 ntBASIC1.28□□□□□ -2.2
LRIT1Q9P2V4 AL513043.2-201ENST00000573941 143 ntBASIC1.28□□□□□ -2.2
LRIT1Q9P2V4 RMST_2.1-201ENST00000617263 136 ntBASIC1.28□□□□□ -2.2
LRIT1Q9P2V4 AC023934.1-201ENST00000574529 2389 ntBASIC1.28□□□□□ -2.2
LRIT1Q9P2V4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
LRIT1Q9P2V4 Y_RNA.73-201ENST00000362910 113 ntBASIC1.27□□□□□ -2.21
LRIT1Q9P2V4 RNU6-53P-201ENST00000365367 106 ntBASIC1.27□□□□□ -2.21
LRIT1Q9P2V4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.27□□□□□ -2.21
LRIT1Q9P2V4 SNORD93-201ENST00000408813 74 ntBASIC1.27□□□□□ -2.21
LRIT1Q9P2V4 RNU6-402P-201ENST00000410678 103 ntBASIC1.27□□□□□ -2.21
LRIT1Q9P2V4 SNORD79.1-201ENST00000516069 84 ntBASIC1.27□□□□□ -2.21
LRIT1Q9P2V4 RNU7-40P-201ENST00000516397 64 ntBASIC1.27□□□□□ -2.21
LRIT1Q9P2V4 RNA5SP102-201ENST00000516865 106 ntBASIC1.27□□□□□ -2.21
LRIT1Q9P2V4 RNU6-850P-201ENST00000516934 103 ntBASIC1.27□□□□□ -2.21
LRIT1Q9P2V4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
LRIT1Q9P2V4 RNU6-219P-201ENST00000364728 107 ntBASIC1.26□□□□□ -2.21
LRIT1Q9P2V4 SNORA40.6-201ENST00000391153 128 ntBASIC1.26□□□□□ -2.21
LRIT1Q9P2V4 AC004223.1-201ENST00000479840 271 ntBASIC1.26□□□□□ -2.21
LRIT1Q9P2V4 RN7SKP12-201ENST00000516275 143 ntBASIC1.26□□□□□ -2.21
LRIT1Q9P2V4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.26□□□□□ -2.21
LRIT1Q9P2V4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.26□□□□□ -2.21
LRIT1Q9P2V4 MIR3660-201ENST00000584845 100 ntBASIC1.26□□□□□ -2.21
LRIT1Q9P2V4 AC106800.4-201ENST00000614905 153 ntBASIC1.26□□□□□ -2.21
LRIT1Q9P2V4 RNU6-403P-201ENST00000363163 104 ntBASIC1.25□□□□□ -2.21
LRIT1Q9P2V4 SNORD116-10-201ENST00000363791 102 ntBASIC1.25□□□□□ -2.21
LRIT1Q9P2V4 RNU6-934P-201ENST00000365154 107 ntBASIC1.25□□□□□ -2.21
LRIT1Q9P2V4 SNORD38.2-201ENST00000384470 69 ntBASIC1.25□□□□□ -2.21
LRIT1Q9P2V4 Y_RNA.540-201ENST00000384638 111 ntBASIC1.25□□□□□ -2.21
LRIT1Q9P2V4 MIR450A2-201ENST00000385022 100 ntBASIC1.25□□□□□ -2.21
LRIT1Q9P2V4 MIR4771-2-201ENST00000577758 74 ntBASIC1.25□□□□□ -2.21
LRIT1Q9P2V4 MIR4771-1-201ENST00000582617 74 ntBASIC1.25□□□□□ -2.21
LRIT1Q9P2V4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
LRIT1Q9P2V4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
LRIT1Q9P2V4 Y_RNA.13-201ENST00000362403 112 ntBASIC1.24□□□□□ -2.21
LRIT1Q9P2V4 Y_RNA.96-201ENST00000363092 109 ntBASIC1.24□□□□□ -2.21
LRIT1Q9P2V4 RNA5SP173-201ENST00000364857 136 ntBASIC1.24□□□□□ -2.21
LRIT1Q9P2V4 RNU6-573P-201ENST00000383938 106 ntBASIC1.24□□□□□ -2.21
LRIT1Q9P2V4 RNU6-675P-201ENST00000384236 104 ntBASIC1.24□□□□□ -2.21
LRIT1Q9P2V4 SNORA72.6-201ENST00000384520 129 ntBASIC1.24□□□□□ -2.21
LRIT1Q9P2V4 AL591704.2-201ENST00000421658 181 ntBASIC1.24□□□□□ -2.21
LRIT1Q9P2V4 MIR8066-201ENST00000617280 78 ntBASIC1.24□□□□□ -2.21
LRIT1Q9P2V4 SNORD114-22-201ENST00000365423 72 ntBASIC1.23□□□□□ -2.21
LRIT1Q9P2V4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
LRIT1Q9P2V4 SNORA80D-201ENST00000384488 135 ntBASIC1.23□□□□□ -2.21
LRIT1Q9P2V4 Y_RNA.620-201ENST00000411009 88 ntBASIC1.23□□□□□ -2.21
LRIT1Q9P2V4 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 299.9 ms