Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 7SK.13-201ENST00000622040 250 ntBASIC1.92□□□□□ -2.1
CNTN3Q9P232 RNU6-403P-201ENST00000363163 104 ntBASIC1.91□□□□□ -2.1
CNTN3Q9P232 RNU6-482P-201ENST00000391068 107 ntBASIC1.91□□□□□ -2.1
CNTN3Q9P232 RNU6-243P-201ENST00000391140 107 ntBASIC1.91□□□□□ -2.1
CNTN3Q9P232 SNORA25.16-201ENST00000516741 121 ntBASIC1.91□□□□□ -2.1
CNTN3Q9P232 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.91□□□□□ -2.1
CNTN3Q9P232 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CNTN3Q9P232 AC023934.1-201ENST00000574529 2389 ntBASIC1.91□□□□□ -2.1
CNTN3Q9P232 SNORD36A-201ENST00000362874 73 ntBASIC1.9□□□□□ -2.11
CNTN3Q9P232 RNU6-652P-201ENST00000365488 107 ntBASIC1.9□□□□□ -2.11
CNTN3Q9P232 RNU6-24P-201ENST00000384440 107 ntBASIC1.9□□□□□ -2.11
CNTN3Q9P232 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.9□□□□□ -2.11
CNTN3Q9P232 MIR1257-201ENST00000408490 117 ntBASIC1.9□□□□□ -2.11
CNTN3Q9P232 AC048334.1-201ENST00000477975 159 ntBASIC1.9□□□□□ -2.11
CNTN3Q9P232 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.9□□□□□ -2.11
CNTN3Q9P232 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CNTN3Q9P232 MIR101-2-201ENST00000362195 79 ntBASIC1.89□□□□□ -2.11
CNTN3Q9P232 RNA5SP99-201ENST00000364020 114 ntBASIC1.89□□□□□ -2.11
CNTN3Q9P232 SNORD48-201ENST00000364953 64 ntBASIC1.89□□□□□ -2.11
CNTN3Q9P232 RNU6-934P-201ENST00000365154 107 ntBASIC1.89□□□□□ -2.11
CNTN3Q9P232 Y_RNA.330-201ENST00000365230 109 ntBASIC1.89□□□□□ -2.11
CNTN3Q9P232 MIR516A2-201ENST00000384888 90 ntBASIC1.89□□□□□ -2.11
CNTN3Q9P232 MIR516A1-201ENST00000385033 90 ntBASIC1.89□□□□□ -2.11
CNTN3Q9P232 SNORD111-201ENST00000408139 94 ntBASIC1.89□□□□□ -2.11
CNTN3Q9P232 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.89□□□□□ -2.11
CNTN3Q9P232 RPS27P16-201ENST00000425758 201 ntBASIC1.89□□□□□ -2.11
CNTN3Q9P232 AC036111.3-201ENST00000526389 112 ntBASIC1.89□□□□□ -2.11
CNTN3Q9P232 AL353997.5-201ENST00000618886 171 ntBASIC1.89□□□□□ -2.11
CNTN3Q9P232 RNU1-17P-201ENST00000363022 152 ntBASIC1.88□□□□□ -2.11
CNTN3Q9P232 RNU6-857P-201ENST00000515893 110 ntBASIC1.88□□□□□ -2.11
CNTN3Q9P232 SNORA25.15-201ENST00000516487 89 ntBASIC1.88□□□□□ -2.11
CNTN3Q9P232 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.88□□□□□ -2.11
CNTN3Q9P232 MIR4419B-201ENST00000577260 68 ntBASIC1.88□□□□□ -2.11
CNTN3Q9P232 MIR548H5-201ENST00000580314 60 ntBASIC1.88□□□□□ -2.11
CNTN3Q9P232 MIR8081-201ENST00000611533 95 ntBASIC1.88□□□□□ -2.11
CNTN3Q9P232 Y_RNA.316-201ENST00000365118 111 ntBASIC1.87□□□□□ -2.11
CNTN3Q9P232 RNA5SP190-201ENST00000365222 118 ntBASIC1.87□□□□□ -2.11
CNTN3Q9P232 MIR635-201ENST00000384830 98 ntBASIC1.87□□□□□ -2.11
CNTN3Q9P232 AL591704.2-201ENST00000421658 181 ntBASIC1.87□□□□□ -2.11
CNTN3Q9P232 RNU7-85P-201ENST00000458851 63 ntBASIC1.87□□□□□ -2.11
CNTN3Q9P232 AC023790.1-201ENST00000482174 347 ntBASIC1.87□□□□□ -2.11
CNTN3Q9P232 SNORA31.2-201ENST00000516019 134 ntBASIC1.87□□□□□ -2.11
CNTN3Q9P232 RNU6-765P-201ENST00000516916 99 ntBASIC1.87□□□□□ -2.11
CNTN3Q9P232 AC140658.3-201ENST00000567603 271 ntBASIC1.87□□□□□ -2.11
CNTN3Q9P232 Y_RNA.56-201ENST00000362798 112 ntBASIC1.86□□□□□ -2.11
CNTN3Q9P232 RNU6-65P-201ENST00000516332 98 ntBASIC1.86□□□□□ -2.11
CNTN3Q9P232 MIR4536-1-201ENST00000583537 88 ntBASIC1.86□□□□□ -2.11
CNTN3Q9P232 MIR6082-201ENST00000613604 109 ntBASIC1.86□□□□□ -2.11
CNTN3Q9P232 AC106800.4-201ENST00000614905 153 ntBASIC1.86□□□□□ -2.11
CNTN3Q9P232 RNU4-32P-201ENST00000363404 141 ntBASIC1.85□□□□□ -2.11
CNTN3Q9P232 Y_RNA.244-201ENST00000364484 109 ntBASIC1.85□□□□□ -2.11
CNTN3Q9P232 SNORA80D-201ENST00000384488 135 ntBASIC1.85□□□□□ -2.11
CNTN3Q9P232 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.85□□□□□ -2.11
CNTN3Q9P232 SNORA75.2-201ENST00000391138 150 ntBASIC1.85□□□□□ -2.11
CNTN3Q9P232 SNORA75.3-201ENST00000391231 150 ntBASIC1.85□□□□□ -2.11
CNTN3Q9P232 SNORD100-201ENST00000408573 76 ntBASIC1.85□□□□□ -2.11
CNTN3Q9P232 SNORD63B-201ENST00000411005 70 ntBASIC1.85□□□□□ -2.11
CNTN3Q9P232 SNORD83.1-201ENST00000411362 77 ntBASIC1.85□□□□□ -2.11
CNTN3Q9P232 MIR125B2-201ENST00000385128 89 ntBASIC1.84□□□□□ -2.11
CNTN3Q9P232 MIR519A1-201ENST00000385257 85 ntBASIC1.84□□□□□ -2.11
CNTN3Q9P232 RNU6-466P-201ENST00000391224 103 ntBASIC1.84□□□□□ -2.11
CNTN3Q9P232 SNORD13-201ENST00000459299 104 ntBASIC1.84□□□□□ -2.11
CNTN3Q9P232 snoU13.21-201ENST00000459368 105 ntBASIC1.84□□□□□ -2.11
CNTN3Q9P232 RNU7-106P-201ENST00000459514 67 ntBASIC1.84□□□□□ -2.11
CNTN3Q9P232 AC019288.1-201ENST00000557918 224 ntBASIC1.84□□□□□ -2.11
CNTN3Q9P232 AC013244.2-201ENST00000603396 103 ntBASIC1.84□□□□□ -2.11
CNTN3Q9P232 MIR502-201ENST00000606349 86 ntBASIC1.84□□□□□ -2.11
CNTN3Q9P232 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CNTN3Q9P232 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CNTN3Q9P232 Y_RNA.13-201ENST00000362403 112 ntBASIC1.83□□□□□ -2.12
CNTN3Q9P232 Y_RNA.508-201ENST00000384502 114 ntBASIC1.83□□□□□ -2.12
CNTN3Q9P232 Y_RNA.536-201ENST00000384621 113 ntBASIC1.83□□□□□ -2.12
CNTN3Q9P232 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.83□□□□□ -2.12
CNTN3Q9P232 snoU13.11-201ENST00000459219 104 ntBASIC1.83□□□□□ -2.12
CNTN3Q9P232 SNORA25.13-201ENST00000516395 103 ntBASIC1.83□□□□□ -2.12
CNTN3Q9P232 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CNTN3Q9P232 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
CNTN3Q9P232 Y_RNA.283-201ENST00000364798 112 ntBASIC1.82□□□□□ -2.12
CNTN3Q9P232 RPS26P5-201ENST00000418544 335 ntBASIC1.82□□□□□ -2.12
CNTN3Q9P232 RNU7-21P-201ENST00000459430 62 ntBASIC1.82□□□□□ -2.12
CNTN3Q9P232 RNU7-153P-201ENST00000516455 62 ntBASIC1.82□□□□□ -2.12
CNTN3Q9P232 Y_RNA.363-201ENST00000365529 113 ntBASIC1.81□□□□□ -2.12
CNTN3Q9P232 RNU6-811P-201ENST00000384069 107 ntBASIC1.81□□□□□ -2.12
CNTN3Q9P232 SNORA17.3-201ENST00000391159 129 ntBASIC1.81□□□□□ -2.12
CNTN3Q9P232 RNU7-90P-201ENST00000459216 62 ntBASIC1.81□□□□□ -2.12
CNTN3Q9P232 MIR4771-2-201ENST00000577758 74 ntBASIC1.81□□□□□ -2.12
CNTN3Q9P232 MIR4771-1-201ENST00000582617 74 ntBASIC1.81□□□□□ -2.12
CNTN3Q9P232 SNORD92-201ENST00000585078 85 ntBASIC1.81□□□□□ -2.12
CNTN3Q9P232 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.8□□□□□ -2.12
CNTN3Q9P232 TRAJ51-201ENST00000504127 63 ntBASIC1.8□□□□□ -2.12
CNTN3Q9P232 RNU7-156P-201ENST00000517214 74 ntBASIC1.8□□□□□ -2.12
CNTN3Q9P232 MIR4662A-201ENST00000637499 67 ntBASIC1.8□□□□□ -2.12
CNTN3Q9P232 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CNTN3Q9P232 RNU6-624P-201ENST00000363411 107 ntBASIC1.79□□□□□ -2.12
CNTN3Q9P232 MIR548U-201ENST00000390728 81 ntBASIC1.79□□□□□ -2.12
CNTN3Q9P232 AL603825.1-201ENST00000438481 80 ntBASIC1.79□□□□□ -2.12
CNTN3Q9P232 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CNTN3Q9P232 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CNTN3Q9P232 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
CNTN3Q9P232 Y_RNA.42-201ENST00000362660 108 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms