Protein–RNA interactions for Protein: Q9P1Q0

VPS54, Vacuolar protein sorting-associated protein 54, humanhuman

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54Q9P1Q0 MIR4768-201ENST00000585270 74 ntBASIC-0.06□□□□□ -2.42
VPS54Q9P1Q0 AL162376.1-201ENST00000624117 175 ntBASIC-0.06□□□□□ -2.42
VPS54Q9P1Q0 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.07□□□□□ -2.42
VPS54Q9P1Q0 MIR635-201ENST00000384830 98 ntBASIC-0.07□□□□□ -2.42
VPS54Q9P1Q0 MT-TI-201ENST00000387365 69 ntBASIC-0.07□□□□□ -2.42
VPS54Q9P1Q0 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.07□□□□□ -2.42
VPS54Q9P1Q0 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.07□□□□□ -2.42
VPS54Q9P1Q0 MIR5190-201ENST00000581537 80 ntBASIC-0.07□□□□□ -2.42
VPS54Q9P1Q0 MIR599-201ENST00000385069 95 ntBASIC-0.08□□□□□ -2.42
VPS54Q9P1Q0 RNU6-861P-201ENST00000516745 106 ntBASIC-0.08□□□□□ -2.42
VPS54Q9P1Q0 AC067863.3-201ENST00000624172 122 ntBASIC-0.08□□□□□ -2.42
VPS54Q9P1Q0 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.09□□□□□ -2.42
VPS54Q9P1Q0 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.09□□□□□ -2.42
VPS54Q9P1Q0 RNU6-756P-201ENST00000383997 107 ntBASIC-0.09□□□□□ -2.42
VPS54Q9P1Q0 RNU6-929P-201ENST00000384429 107 ntBASIC-0.09□□□□□ -2.42
VPS54Q9P1Q0 SNORD77B-201ENST00000391112 67 ntBASIC-0.09□□□□□ -2.42
VPS54Q9P1Q0 AC074198.2-201ENST00000508153 258 ntBASIC-0.09□□□□□ -2.42
VPS54Q9P1Q0 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.09□□□□□ -2.42
VPS54Q9P1Q0 IGKV1-22-201ENST00000524313 326 ntBASIC-0.09□□□□□ -2.42
VPS54Q9P1Q0 AP002392.1-201ENST00000537692 208 ntBASIC-0.09□□□□□ -2.42
VPS54Q9P1Q0 MIR4290-201ENST00000583807 95 ntBASIC-0.09□□□□□ -2.42
VPS54Q9P1Q0 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.09□□□□□ -2.42
VPS54Q9P1Q0 AC072026.1-201ENST00000605023 201 ntBASIC-0.09□□□□□ -2.42
VPS54Q9P1Q0 MIR376B-201ENST00000614515 100 ntBASIC-0.09□□□□□ -2.42
VPS54Q9P1Q0 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.1□□□□□ -2.43
VPS54Q9P1Q0 RNU6-463P-201ENST00000384340 107 ntBASIC-0.1□□□□□ -2.43
VPS54Q9P1Q0 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
VPS54Q9P1Q0 RNU7-195P-201ENST00000458793 62 ntBASIC-0.1□□□□□ -2.43
VPS54Q9P1Q0 RNU7-2P-201ENST00000516096 62 ntBASIC-0.1□□□□□ -2.43
VPS54Q9P1Q0 RNU7-10P-201ENST00000607194 63 ntBASIC-0.1□□□□□ -2.43
VPS54Q9P1Q0 AL137067.1-201ENST00000615933 120 ntBASIC-0.1□□□□□ -2.43
VPS54Q9P1Q0 MIR2909-201ENST00000617113 69 ntBASIC-0.1□□□□□ -2.43
VPS54Q9P1Q0 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.11□□□□□ -2.43
VPS54Q9P1Q0 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.11□□□□□ -2.43
VPS54Q9P1Q0 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.11□□□□□ -2.43
VPS54Q9P1Q0 RNU4-11P-201ENST00000365287 132 ntBASIC-0.11□□□□□ -2.43
VPS54Q9P1Q0 RNU6-449P-201ENST00000383914 107 ntBASIC-0.11□□□□□ -2.43
VPS54Q9P1Q0 SNORD41.1-201ENST00000391000 69 ntBASIC-0.11□□□□□ -2.43
VPS54Q9P1Q0 RNU6-460P-201ENST00000391158 108 ntBASIC-0.11□□□□□ -2.43
VPS54Q9P1Q0 RNU7-106P-201ENST00000459514 67 ntBASIC-0.11□□□□□ -2.43
VPS54Q9P1Q0 RNU6-782P-201ENST00000516852 104 ntBASIC-0.11□□□□□ -2.43
VPS54Q9P1Q0 MIR3925-201ENST00000584674 77 ntBASIC-0.11□□□□□ -2.43
VPS54Q9P1Q0 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.11□□□□□ -2.43
VPS54Q9P1Q0 RNU6-379P-201ENST00000363813 104 ntBASIC-0.12□□□□□ -2.43
VPS54Q9P1Q0 RNU6-682P-201ENST00000363843 106 ntBASIC-0.12□□□□□ -2.43
VPS54Q9P1Q0 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.12□□□□□ -2.43
VPS54Q9P1Q0 RNU6-302P-201ENST00000365249 107 ntBASIC-0.12□□□□□ -2.43
VPS54Q9P1Q0 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.12□□□□□ -2.43
VPS54Q9P1Q0 MIR34C-201ENST00000384831 77 ntBASIC-0.12□□□□□ -2.43
VPS54Q9P1Q0 SNORD63B-201ENST00000411005 70 ntBASIC-0.12□□□□□ -2.43
VPS54Q9P1Q0 RNA5SP484-201ENST00000458857 111 ntBASIC-0.12□□□□□ -2.43
VPS54Q9P1Q0 MIR5706-201ENST00000579841 80 ntBASIC-0.12□□□□□ -2.43
VPS54Q9P1Q0 AL109933.3-201ENST00000619095 188 ntBASIC-0.12□□□□□ -2.43
VPS54Q9P1Q0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.12□□□□□ -2.43
VPS54Q9P1Q0 SNORA32.1-201ENST00000364514 115 ntBASIC-0.13□□□□□ -2.43
VPS54Q9P1Q0 SNORD115-35-201ENST00000365122 82 ntBASIC-0.13□□□□□ -2.43
VPS54Q9P1Q0 MIR106A-201ENST00000384870 81 ntBASIC-0.13□□□□□ -2.43
VPS54Q9P1Q0 RNU7-197P-201ENST00000458836 62 ntBASIC-0.13□□□□□ -2.43
VPS54Q9P1Q0 RNU6-138P-201ENST00000515952 107 ntBASIC-0.13□□□□□ -2.43
VPS54Q9P1Q0 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.13□□□□□ -2.43
VPS54Q9P1Q0 RNU7-6P-201ENST00000516845 62 ntBASIC-0.13□□□□□ -2.43
VPS54Q9P1Q0 RNU6-388P-201ENST00000517012 105 ntBASIC-0.13□□□□□ -2.43
VPS54Q9P1Q0 RNU6-389P-201ENST00000517048 105 ntBASIC-0.13□□□□□ -2.43
VPS54Q9P1Q0 NAMPTP3-201ENST00000569273 224 ntBASIC-0.13□□□□□ -2.43
VPS54Q9P1Q0 MIR548AD-201ENST00000584780 82 ntBASIC-0.13□□□□□ -2.43
VPS54Q9P1Q0 uc_338.28-201ENST00000612082 187 ntBASIC-0.13□□□□□ -2.43
VPS54Q9P1Q0 AC087741.2-201ENST00000619415 172 ntBASIC-0.13□□□□□ -2.43
VPS54Q9P1Q0 AP001362.1-201ENST00000625165 124 ntBASIC-0.13□□□□□ -2.43
VPS54Q9P1Q0 RNA5SP457-201ENST00000363657 124 ntBASIC-0.14□□□□□ -2.43
VPS54Q9P1Q0 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.14□□□□□ -2.43
VPS54Q9P1Q0 RNU6-865P-201ENST00000364772 107 ntBASIC-0.14□□□□□ -2.43
VPS54Q9P1Q0 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.14□□□□□ -2.43
VPS54Q9P1Q0 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.14□□□□□ -2.43
VPS54Q9P1Q0 RNU6-652P-201ENST00000365488 107 ntBASIC-0.14□□□□□ -2.43
VPS54Q9P1Q0 RNA5SP163-201ENST00000410304 99 ntBASIC-0.14□□□□□ -2.43
VPS54Q9P1Q0 HMGN2P22-201ENST00000427588 175 ntBASIC-0.14□□□□□ -2.43
VPS54Q9P1Q0 AC097635.1-201ENST00000450678 155 ntBASIC-0.14□□□□□ -2.43
VPS54Q9P1Q0 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.14□□□□□ -2.43
VPS54Q9P1Q0 MIR4677-201ENST00000584153 80 ntBASIC-0.14□□□□□ -2.43
VPS54Q9P1Q0 RNU6-524P-201ENST00000384270 107 ntBASIC-0.15□□□□□ -2.43
VPS54Q9P1Q0 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.15□□□□□ -2.43
VPS54Q9P1Q0 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.15□□□□□ -2.43
VPS54Q9P1Q0 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.15□□□□□ -2.43
VPS54Q9P1Q0 MIR3920-201ENST00000581751 86 ntBASIC-0.15□□□□□ -2.43
VPS54Q9P1Q0 AL353621.2-201ENST00000605340 133 ntBASIC-0.15□□□□□ -2.43
VPS54Q9P1Q0 AC021753.1-201ENST00000635724 168 ntBASIC-0.15□□□□□ -2.43
VPS54Q9P1Q0 RNU6-161P-201ENST00000363051 106 ntBASIC-0.16□□□□□ -2.44
VPS54Q9P1Q0 RNU6-151P-201ENST00000364158 107 ntBASIC-0.16□□□□□ -2.44
VPS54Q9P1Q0 RNU6-915P-201ENST00000364943 103 ntBASIC-0.16□□□□□ -2.44
VPS54Q9P1Q0 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.16□□□□□ -2.44
VPS54Q9P1Q0 SNORD110-201ENST00000408189 75 ntBASIC-0.16□□□□□ -2.44
VPS54Q9P1Q0 MIR548I2-201ENST00000408348 149 ntBASIC-0.16□□□□□ -2.44
VPS54Q9P1Q0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.16□□□□□ -2.44
VPS54Q9P1Q0 RNU6-735P-201ENST00000410612 107 ntBASIC-0.16□□□□□ -2.44
VPS54Q9P1Q0 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.16□□□□□ -2.44
VPS54Q9P1Q0 AC141557.1-201ENST00000540982 400 ntBASIC-0.16□□□□□ -2.44
VPS54Q9P1Q0 MIR3121-201ENST00000579680 77 ntBASIC-0.16□□□□□ -2.44
VPS54Q9P1Q0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.16□□□□□ -2.44
VPS54Q9P1Q0 MIR1255B1-201ENST00000636325 63 ntBASIC-0.16□□□□□ -2.44
VPS54Q9P1Q0 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms