Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 BX276092.1-201ENST00000427368 251 ntBASIC1.95□□□□□ -2.1
CXXC1Q9P0U4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.95□□□□□ -2.1
CXXC1Q9P0U4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CXXC1Q9P0U4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
CXXC1Q9P0U4 RNA5SP37-201ENST00000365420 130 ntBASIC1.94□□□□□ -2.1
CXXC1Q9P0U4 RNU6-531P-201ENST00000516694 104 ntBASIC1.94□□□□□ -2.1
CXXC1Q9P0U4 RNU6-850P-201ENST00000516934 103 ntBASIC1.94□□□□□ -2.1
CXXC1Q9P0U4 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.94□□□□□ -2.1
CXXC1Q9P0U4 AL513043.2-201ENST00000573941 143 ntBASIC1.94□□□□□ -2.1
CXXC1Q9P0U4 MIR502-201ENST00000606349 86 ntBASIC1.94□□□□□ -2.1
CXXC1Q9P0U4 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.94□□□□□ -2.1
CXXC1Q9P0U4 AC106800.4-201ENST00000614905 153 ntBASIC1.94□□□□□ -2.1
CXXC1Q9P0U4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.93□□□□□ -2.1
CXXC1Q9P0U4 Y_RNA.388-201ENST00000383919 113 ntBASIC1.93□□□□□ -2.1
CXXC1Q9P0U4 Y_RNA.588-201ENST00000391254 102 ntBASIC1.93□□□□□ -2.1
CXXC1Q9P0U4 RNU7-90P-201ENST00000459216 62 ntBASIC1.93□□□□□ -2.1
CXXC1Q9P0U4 snoU13.21-201ENST00000459368 105 ntBASIC1.93□□□□□ -2.1
CXXC1Q9P0U4 RNU7-21P-201ENST00000459430 62 ntBASIC1.93□□□□□ -2.1
CXXC1Q9P0U4 SNORA25.16-201ENST00000516741 121 ntBASIC1.93□□□□□ -2.1
CXXC1Q9P0U4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CXXC1Q9P0U4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.92□□□□□ -2.1
CXXC1Q9P0U4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.92□□□□□ -2.1
CXXC1Q9P0U4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.92□□□□□ -2.1
CXXC1Q9P0U4 RNU1-123P-201ENST00000458950 160 ntBASIC1.92□□□□□ -2.1
CXXC1Q9P0U4 AC025033.1-201ENST00000463883 194 ntBASIC1.92□□□□□ -2.1
CXXC1Q9P0U4 AC023827.1-201ENST00000569247 97 ntBASIC1.92□□□□□ -2.1
CXXC1Q9P0U4 MIR4771-2-201ENST00000577758 74 ntBASIC1.92□□□□□ -2.1
CXXC1Q9P0U4 MIR4285-201ENST00000581001 85 ntBASIC1.92□□□□□ -2.1
CXXC1Q9P0U4 MIR4668-201ENST00000582284 70 ntBASIC1.92□□□□□ -2.1
CXXC1Q9P0U4 MIR4771-1-201ENST00000582617 74 ntBASIC1.92□□□□□ -2.1
CXXC1Q9P0U4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.92□□□□□ -2.1
CXXC1Q9P0U4 RNU6-994P-201ENST00000410507 111 ntBASIC1.91□□□□□ -2.1
CXXC1Q9P0U4 RNU6-402P-201ENST00000410678 103 ntBASIC1.91□□□□□ -2.1
CXXC1Q9P0U4 RNU6-1194P-201ENST00000516208 104 ntBASIC1.91□□□□□ -2.1
CXXC1Q9P0U4 RNA5SP102-201ENST00000516865 106 ntBASIC1.91□□□□□ -2.1
CXXC1Q9P0U4 AC025521.1-201ENST00000621624 286 ntBASIC1.91□□□□□ -2.1
CXXC1Q9P0U4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
CXXC1Q9P0U4 MIR101-2-201ENST00000362195 79 ntBASIC1.9□□□□□ -2.11
CXXC1Q9P0U4 Y_RNA.609-201ENST00000410669 89 ntBASIC1.9□□□□□ -2.11
CXXC1Q9P0U4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.9□□□□□ -2.11
CXXC1Q9P0U4 SNORD79.1-201ENST00000516069 84 ntBASIC1.9□□□□□ -2.11
CXXC1Q9P0U4 SNORA70.22-201ENST00000517160 124 ntBASIC1.9□□□□□ -2.11
CXXC1Q9P0U4 RNU6-675P-201ENST00000384236 104 ntBASIC1.89□□□□□ -2.11
CXXC1Q9P0U4 RNY1P4-201ENST00000384595 115 ntBASIC1.89□□□□□ -2.11
CXXC1Q9P0U4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CXXC1Q9P0U4 MIR125B2-201ENST00000385128 89 ntBASIC1.88□□□□□ -2.11
CXXC1Q9P0U4 RNA5SP338-201ENST00000410495 85 ntBASIC1.88□□□□□ -2.11
CXXC1Q9P0U4 RNU6-717P-201ENST00000459076 104 ntBASIC1.88□□□□□ -2.11
CXXC1Q9P0U4 AL645939.4-201ENST00000604495 135 ntBASIC1.88□□□□□ -2.11
CXXC1Q9P0U4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CXXC1Q9P0U4 MIR222-201ENST00000384992 110 ntBASIC1.87□□□□□ -2.11
CXXC1Q9P0U4 RPS26P5-201ENST00000418544 335 ntBASIC1.87□□□□□ -2.11
CXXC1Q9P0U4 RNU7-10P-201ENST00000607194 63 ntBASIC1.87□□□□□ -2.11
CXXC1Q9P0U4 MIR6082-201ENST00000613604 109 ntBASIC1.87□□□□□ -2.11
CXXC1Q9P0U4 AP000553.5-201ENST00000641933 54 ntBASIC1.87□□□□□ -2.11
CXXC1Q9P0U4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CXXC1Q9P0U4 RNA5SP173-201ENST00000364857 136 ntBASIC1.86□□□□□ -2.11
CXXC1Q9P0U4 SNORD114-22-201ENST00000365423 72 ntBASIC1.86□□□□□ -2.11
CXXC1Q9P0U4 SNORD12-201ENST00000391002 90 ntBASIC1.86□□□□□ -2.11
CXXC1Q9P0U4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.86□□□□□ -2.11
CXXC1Q9P0U4 Y_RNA.620-201ENST00000411009 88 ntBASIC1.86□□□□□ -2.11
CXXC1Q9P0U4 AL161932.1-201ENST00000437408 146 ntBASIC1.86□□□□□ -2.11
CXXC1Q9P0U4 MIR4448-201ENST00000584360 86 ntBASIC1.86□□□□□ -2.11
CXXC1Q9P0U4 AC020891.4-201ENST00000605745 93 ntBASIC1.86□□□□□ -2.11
CXXC1Q9P0U4 AC022709.1-201ENST00000615967 87 ntBASIC1.86□□□□□ -2.11
CXXC1Q9P0U4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
CXXC1Q9P0U4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CXXC1Q9P0U4 Y_RNA.13-201ENST00000362403 112 ntBASIC1.85□□□□□ -2.11
CXXC1Q9P0U4 RNU6-219P-201ENST00000364728 107 ntBASIC1.85□□□□□ -2.11
CXXC1Q9P0U4 RNU6-242P-201ENST00000384359 107 ntBASIC1.85□□□□□ -2.11
CXXC1Q9P0U4 RNU6-519P-201ENST00000410590 108 ntBASIC1.85□□□□□ -2.11
CXXC1Q9P0U4 AC022137.1-201ENST00000483735 151 ntBASIC1.85□□□□□ -2.11
CXXC1Q9P0U4 RNU7-40P-201ENST00000516397 64 ntBASIC1.85□□□□□ -2.11
CXXC1Q9P0U4 RNU6-765P-201ENST00000516916 99 ntBASIC1.85□□□□□ -2.11
CXXC1Q9P0U4 SNORA16.1-201ENST00000364597 132 ntBASIC1.84□□□□□ -2.11
CXXC1Q9P0U4 RNU6-364P-201ENST00000384387 107 ntBASIC1.84□□□□□ -2.11
CXXC1Q9P0U4 RNU6-1152P-201ENST00000384576 107 ntBASIC1.84□□□□□ -2.11
CXXC1Q9P0U4 AC015818.7-201ENST00000428754 109 ntBASIC1.84□□□□□ -2.11
CXXC1Q9P0U4 AC087499.7-201ENST00000441958 109 ntBASIC1.84□□□□□ -2.11
CXXC1Q9P0U4 AC067940.1-201ENST00000458411 300 ntBASIC1.84□□□□□ -2.11
CXXC1Q9P0U4 RNU7-156P-201ENST00000517214 74 ntBASIC1.84□□□□□ -2.11
CXXC1Q9P0U4 MIR548H5-201ENST00000580314 60 ntBASIC1.84□□□□□ -2.11
CXXC1Q9P0U4 AC013244.2-201ENST00000603396 103 ntBASIC1.84□□□□□ -2.11
CXXC1Q9P0U4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
CXXC1Q9P0U4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
CXXC1Q9P0U4 SNORA7.1-201ENST00000363750 139 ntBASIC1.83□□□□□ -2.12
CXXC1Q9P0U4 RNU1-42P-201ENST00000364033 160 ntBASIC1.83□□□□□ -2.12
CXXC1Q9P0U4 Y_RNA.374-201ENST00000365606 101 ntBASIC1.83□□□□□ -2.12
CXXC1Q9P0U4 MIR635-201ENST00000384830 98 ntBASIC1.83□□□□□ -2.12
CXXC1Q9P0U4 RNU6-243P-201ENST00000391140 107 ntBASIC1.83□□□□□ -2.12
CXXC1Q9P0U4 RNU6-1254P-201ENST00000391266 104 ntBASIC1.83□□□□□ -2.12
CXXC1Q9P0U4 AC023790.1-201ENST00000482174 347 ntBASIC1.83□□□□□ -2.12
CXXC1Q9P0U4 MIR4676-201ENST00000583078 72 ntBASIC1.83□□□□□ -2.12
CXXC1Q9P0U4 MIR6515-201ENST00000619843 57 ntBASIC1.83□□□□□ -2.12
CXXC1Q9P0U4 PVT1_3.1-201ENST00000620853 95 ntBASIC1.83□□□□□ -2.12
CXXC1Q9P0U4 uc_338.20-201ENST00000621563 178 ntBASIC1.83□□□□□ -2.12
CXXC1Q9P0U4 Y_RNA.36-201ENST00000362602 112 ntBASIC1.82□□□□□ -2.12
CXXC1Q9P0U4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CXXC1Q9P0U4 MIR938-201ENST00000401216 83 ntBASIC1.82□□□□□ -2.12
CXXC1Q9P0U4 SNORD100-201ENST00000408573 76 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms