Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 SNORA75.5-201ENST00000391291 81 ntBASIC-0.36□□□□□ -2.47
EXOSC4Q9NPD3 MIR548I2-201ENST00000408348 149 ntBASIC-0.36□□□□□ -2.47
EXOSC4Q9NPD3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.36□□□□□ -2.47
EXOSC4Q9NPD3 AC107027.2-201ENST00000512197 115 ntBASIC-0.36□□□□□ -2.47
EXOSC4Q9NPD3 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.36□□□□□ -2.47
EXOSC4Q9NPD3 SNORA25.13-201ENST00000516395 103 ntBASIC-0.36□□□□□ -2.47
EXOSC4Q9NPD3 CR383656.4-201ENST00000546909 122 ntBASIC-0.36□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.37□□□□□ -2.47
EXOSC4Q9NPD3 RNU6-46P-201ENST00000383860 107 ntBASIC-0.37□□□□□ -2.47
EXOSC4Q9NPD3 MIR876-201ENST00000401147 81 ntBASIC-0.37□□□□□ -2.47
EXOSC4Q9NPD3 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.37□□□□□ -2.47
EXOSC4Q9NPD3 RNU6-111P-201ENST00000517179 105 ntBASIC-0.37□□□□□ -2.47
EXOSC4Q9NPD3 AC022559.1-201ENST00000520905 205 ntBASIC-0.37□□□□□ -2.47
EXOSC4Q9NPD3 MIR3658-201ENST00000636291 56 ntBASIC-0.37□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.38□□□□□ -2.47
EXOSC4Q9NPD3 RNU6-170P-201ENST00000362832 104 ntBASIC-0.38□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.38□□□□□ -2.47
EXOSC4Q9NPD3 SNORD115-35-201ENST00000365122 82 ntBASIC-0.38□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.38□□□□□ -2.47
EXOSC4Q9NPD3 SNORD18B-201ENST00000365659 72 ntBASIC-0.38□□□□□ -2.47
EXOSC4Q9NPD3 RNU6-738P-201ENST00000384531 106 ntBASIC-0.38□□□□□ -2.47
EXOSC4Q9NPD3 MIR214-201ENST00000385214 110 ntBASIC-0.38□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.38□□□□□ -2.47
EXOSC4Q9NPD3 RNY4P20-201ENST00000516678 93 ntBASIC-0.38□□□□□ -2.47
EXOSC4Q9NPD3 MIR4473-201ENST00000583731 91 ntBASIC-0.38□□□□□ -2.47
EXOSC4Q9NPD3 AC108081.1-201ENST00000604358 221 ntBASIC-0.38□□□□□ -2.47
EXOSC4Q9NPD3 RN7SL660P-201ENST00000614852 299 ntBASIC-0.38□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.39□□□□□ -2.47
EXOSC4Q9NPD3 RNU1-141P-201ENST00000364623 158 ntBASIC-0.39□□□□□ -2.47
EXOSC4Q9NPD3 AL603914.1-201ENST00000401964 204 ntBASIC-0.39□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.39□□□□□ -2.47
EXOSC4Q9NPD3 RNU4-71P-201ENST00000516258 113 ntBASIC-0.39□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.39□□□□□ -2.47
EXOSC4Q9NPD3 RNA5SP480-201ENST00000516840 109 ntBASIC-0.39□□□□□ -2.47
EXOSC4Q9NPD3 MTND5P40-201ENST00000559945 246 ntBASIC-0.39□□□□□ -2.47
EXOSC4Q9NPD3 MIR548AG2-201ENST00000581228 64 ntBASIC-0.39□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.39□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.39□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.39□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.39□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.39□□□□□ -2.47
EXOSC4Q9NPD3 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.4□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.4□□□□□ -2.47
EXOSC4Q9NPD3 RNU6-312P-201ENST00000364629 107 ntBASIC-0.4□□□□□ -2.47
EXOSC4Q9NPD3 SNORD49B-201ENST00000365172 72 ntBASIC-0.4□□□□□ -2.47
EXOSC4Q9NPD3 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.4□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.4□□□□□ -2.47
EXOSC4Q9NPD3 MIR34C-201ENST00000384831 77 ntBASIC-0.4□□□□□ -2.47
EXOSC4Q9NPD3 MIR516A2-201ENST00000384888 90 ntBASIC-0.4□□□□□ -2.47
EXOSC4Q9NPD3 MIR516A1-201ENST00000385033 90 ntBASIC-0.4□□□□□ -2.47
EXOSC4Q9NPD3 MIR519A1-201ENST00000385257 85 ntBASIC-0.4□□□□□ -2.47
EXOSC4Q9NPD3 RNU6-850P-201ENST00000516934 103 ntBASIC-0.4□□□□□ -2.47
EXOSC4Q9NPD3 AL137067.1-201ENST00000615933 120 ntBASIC-0.4□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.41□□□□□ -2.48
EXOSC4Q9NPD3 SNORA63-201ENST00000363450 132 ntBASIC-0.41□□□□□ -2.48
EXOSC4Q9NPD3 U8.6-201ENST00000364939 135 ntBASIC-0.41□□□□□ -2.48
EXOSC4Q9NPD3 SNORD37.2-201ENST00000391075 66 ntBASIC-0.41□□□□□ -2.48
EXOSC4Q9NPD3 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.41□□□□□ -2.48
EXOSC4Q9NPD3 MTCYBP9-201ENST00000431021 303 ntBASIC-0.41□□□□□ -2.48
EXOSC4Q9NPD3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.41□□□□□ -2.48
EXOSC4Q9NPD3 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.42□□□□□ -2.48
EXOSC4Q9NPD3 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.42□□□□□ -2.48
EXOSC4Q9NPD3 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.42□□□□□ -2.48
EXOSC4Q9NPD3 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.42□□□□□ -2.48
EXOSC4Q9NPD3 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.42□□□□□ -2.48
EXOSC4Q9NPD3 MIR519E-201ENST00000385075 84 ntBASIC-0.42□□□□□ -2.48
EXOSC4Q9NPD3 MT-TI-201ENST00000387365 69 ntBASIC-0.42□□□□□ -2.48
EXOSC4Q9NPD3 RNU7-6P-201ENST00000516845 62 ntBASIC-0.42□□□□□ -2.48
EXOSC4Q9NPD3 RNU7-188P-201ENST00000517063 64 ntBASIC-0.42□□□□□ -2.48
EXOSC4Q9NPD3 MIR3646-201ENST00000578301 84 ntBASIC-0.42□□□□□ -2.48
EXOSC4Q9NPD3 YWHAEP2-201ENST00000580066 112 ntBASIC-0.42□□□□□ -2.48
EXOSC4Q9NPD3 AC062037.2-201ENST00000610137 73 ntBASIC-0.42□□□□□ -2.48
EXOSC4Q9NPD3 MIR6507-201ENST00000613630 70 ntBASIC-0.42□□□□□ -2.48
EXOSC4Q9NPD3 AL109933.3-201ENST00000619095 188 ntBASIC-0.42□□□□□ -2.48
EXOSC4Q9NPD3 MIR148A-201ENST00000362215 68 ntBASIC-0.43□□□□□ -2.48
EXOSC4Q9NPD3 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.43□□□□□ -2.48
EXOSC4Q9NPD3 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.43□□□□□ -2.48
EXOSC4Q9NPD3 SNORA20.1-201ENST00000364790 130 ntBASIC-0.43□□□□□ -2.48
EXOSC4Q9NPD3 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.43□□□□□ -2.48
EXOSC4Q9NPD3 RNU6-571P-201ENST00000384128 107 ntBASIC-0.43□□□□□ -2.48
EXOSC4Q9NPD3 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.43□□□□□ -2.48
EXOSC4Q9NPD3 AC244250.2-201ENST00000418731 148 ntBASIC-0.43□□□□□ -2.48
EXOSC4Q9NPD3 RNU7-74P-201ENST00000459104 62 ntBASIC-0.43□□□□□ -2.48
EXOSC4Q9NPD3 RNU6-320P-201ENST00000516511 106 ntBASIC-0.43□□□□□ -2.48
EXOSC4Q9NPD3 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.43□□□□□ -2.48
EXOSC4Q9NPD3 MIR3666-201ENST00000607845 111 ntBASIC-0.43□□□□□ -2.48
EXOSC4Q9NPD3 AC087741.2-201ENST00000619415 172 ntBASIC-0.43□□□□□ -2.48
EXOSC4Q9NPD3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.43□□□□□ -2.48
EXOSC4Q9NPD3 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.44□□□□□ -2.48
EXOSC4Q9NPD3 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.44□□□□□ -2.48
EXOSC4Q9NPD3 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.44□□□□□ -2.48
EXOSC4Q9NPD3 RNU6-239P-201ENST00000390990 99 ntBASIC-0.44□□□□□ -2.48
EXOSC4Q9NPD3 RNA5SP300-201ENST00000391197 107 ntBASIC-0.44□□□□□ -2.48
EXOSC4Q9NPD3 AC109327.2-201ENST00000448339 378 ntBASIC-0.44□□□□□ -2.48
EXOSC4Q9NPD3 RNU6-521P-201ENST00000516663 105 ntBASIC-0.44□□□□□ -2.48
EXOSC4Q9NPD3 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.44□□□□□ -2.48
EXOSC4Q9NPD3 uc_338.10-201ENST00000621872 182 ntBASIC-0.44□□□□□ -2.48
EXOSC4Q9NPD3 AL162726.3-218ENST00000636401 95 ntBASIC-0.44□□□□□ -2.48
EXOSC4Q9NPD3 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.45□□□□□ -2.48
EXOSC4Q9NPD3 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms