Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RNU6-654P-201ENST00000364373 107 ntBASIC1.29□□□□□ -2.2
EBF3Q9H4W6 SNORD115-27-201ENST00000364430 82 ntBASIC1.29□□□□□ -2.2
EBF3Q9H4W6 RNU6-205P-201ENST00000390858 107 ntBASIC1.29□□□□□ -2.2
EBF3Q9H4W6 MIR1255A-201ENST00000408338 113 ntBASIC1.29□□□□□ -2.2
EBF3Q9H4W6 RNA5SP95-201ENST00000410319 137 ntBASIC1.29□□□□□ -2.2
EBF3Q9H4W6 RNA5SP237-201ENST00000410414 113 ntBASIC1.29□□□□□ -2.2
EBF3Q9H4W6 Y_RNA.609-201ENST00000410669 89 ntBASIC1.29□□□□□ -2.2
EBF3Q9H4W6 RNU4-83P-201ENST00000410863 133 ntBASIC1.29□□□□□ -2.2
EBF3Q9H4W6 SPINT5P-201ENST00000448174 155 ntBASIC1.29□□□□□ -2.2
EBF3Q9H4W6 RNU6-947P-201ENST00000516264 106 ntBASIC1.29□□□□□ -2.2
EBF3Q9H4W6 AL512310.8-201ENST00000550183 120 ntBASIC1.29□□□□□ -2.2
EBF3Q9H4W6 AC138749.4-201ENST00000563970 127 ntBASIC1.29□□□□□ -2.2
EBF3Q9H4W6 AL513043.2-201ENST00000573941 143 ntBASIC1.29□□□□□ -2.2
EBF3Q9H4W6 AP001362.1-201ENST00000625165 124 ntBASIC1.29□□□□□ -2.2
EBF3Q9H4W6 MIR6516-201ENST00000630554 81 ntBASIC1.29□□□□□ -2.2
EBF3Q9H4W6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
EBF3Q9H4W6 HSBP1P2-201ENST00000299671 229 ntBASIC1.28□□□□□ -2.2
EBF3Q9H4W6 MIR489-201ENST00000384923 84 ntBASIC1.28□□□□□ -2.2
EBF3Q9H4W6 MIR181B2-201ENST00000385004 89 ntBASIC1.28□□□□□ -2.2
EBF3Q9H4W6 RNU6-447P-201ENST00000410293 104 ntBASIC1.28□□□□□ -2.2
EBF3Q9H4W6 RNU6-1118P-201ENST00000410382 104 ntBASIC1.28□□□□□ -2.2
EBF3Q9H4W6 RNU6-1076P-201ENST00000410397 104 ntBASIC1.28□□□□□ -2.2
EBF3Q9H4W6 RNU6-355P-201ENST00000410427 104 ntBASIC1.28□□□□□ -2.2
EBF3Q9H4W6 RNU6-791P-201ENST00000410467 104 ntBASIC1.28□□□□□ -2.2
EBF3Q9H4W6 RNU6-705P-201ENST00000410601 104 ntBASIC1.28□□□□□ -2.2
EBF3Q9H4W6 RNU6-1100P-201ENST00000410691 104 ntBASIC1.28□□□□□ -2.2
EBF3Q9H4W6 RNU6-860P-201ENST00000410860 104 ntBASIC1.28□□□□□ -2.2
EBF3Q9H4W6 RNU6-1217P-201ENST00000411276 104 ntBASIC1.28□□□□□ -2.2
EBF3Q9H4W6 RNU6-785P-201ENST00000411324 104 ntBASIC1.28□□□□□ -2.2
EBF3Q9H4W6 RPS27P16-201ENST00000425758 201 ntBASIC1.28□□□□□ -2.2
EBF3Q9H4W6 AL133373.1-201ENST00000497098 94 ntBASIC1.28□□□□□ -2.2
EBF3Q9H4W6 RNU6-165P-201ENST00000517170 99 ntBASIC1.28□□□□□ -2.2
EBF3Q9H4W6 AC090897.1-201ENST00000580909 226 ntBASIC1.28□□□□□ -2.2
EBF3Q9H4W6 U6.90-201ENST00000614007 104 ntBASIC1.28□□□□□ -2.2
EBF3Q9H4W6 U6.70-201ENST00000620287 104 ntBASIC1.28□□□□□ -2.2
EBF3Q9H4W6 SNORD114-27-201ENST00000363766 70 ntBASIC1.27□□□□□ -2.21
EBF3Q9H4W6 RNY1P2-201ENST00000364820 117 ntBASIC1.27□□□□□ -2.21
EBF3Q9H4W6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
EBF3Q9H4W6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.27□□□□□ -2.21
EBF3Q9H4W6 RNU7-171P-201ENST00000459581 62 ntBASIC1.27□□□□□ -2.21
EBF3Q9H4W6 AC006160.2-201ENST00000637708 154 ntBASIC1.27□□□□□ -2.21
EBF3Q9H4W6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.26□□□□□ -2.21
EBF3Q9H4W6 RNA5SP133-201ENST00000363368 119 ntBASIC1.26□□□□□ -2.21
EBF3Q9H4W6 RNU6-509P-201ENST00000363519 107 ntBASIC1.26□□□□□ -2.21
EBF3Q9H4W6 Y_RNA.168-201ENST00000363740 102 ntBASIC1.26□□□□□ -2.21
EBF3Q9H4W6 Y_RNA.313-201ENST00000365095 103 ntBASIC1.26□□□□□ -2.21
EBF3Q9H4W6 RNU6-396P-201ENST00000365369 105 ntBASIC1.26□□□□□ -2.21
EBF3Q9H4W6 SNORD26-201ENST00000384147 75 ntBASIC1.26□□□□□ -2.21
EBF3Q9H4W6 RNU6-1165P-201ENST00000410119 107 ntBASIC1.26□□□□□ -2.21
EBF3Q9H4W6 MTND5P40-201ENST00000559945 246 ntBASIC1.26□□□□□ -2.21
EBF3Q9H4W6 AC133485.1-201ENST00000567176 124 ntBASIC1.26□□□□□ -2.21
EBF3Q9H4W6 MIR4666B-201ENST00000578142 81 ntBASIC1.26□□□□□ -2.21
EBF3Q9H4W6 MIR548BB-201ENST00000626714 66 ntBASIC1.26□□□□□ -2.21
EBF3Q9H4W6 U6.109-201ENST00000636749 87 ntBASIC1.26□□□□□ -2.21
EBF3Q9H4W6 RNU6-633P-201ENST00000362612 103 ntBASIC1.25□□□□□ -2.21
EBF3Q9H4W6 RNA5SP264-201ENST00000363115 107 ntBASIC1.25□□□□□ -2.21
EBF3Q9H4W6 RNU6-1125P-201ENST00000363601 107 ntBASIC1.25□□□□□ -2.21
EBF3Q9H4W6 Y_RNA.611-201ENST00000410682 108 ntBASIC1.25□□□□□ -2.21
EBF3Q9H4W6 RNU6-1054P-201ENST00000411293 104 ntBASIC1.25□□□□□ -2.21
EBF3Q9H4W6 SNRPGP12-201ENST00000449481 213 ntBASIC1.25□□□□□ -2.21
EBF3Q9H4W6 RNU7-62P-201ENST00000458856 62 ntBASIC1.25□□□□□ -2.21
EBF3Q9H4W6 MIR4264-201ENST00000583520 66 ntBASIC1.25□□□□□ -2.21
EBF3Q9H4W6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
EBF3Q9H4W6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
EBF3Q9H4W6 RNU6-242P-201ENST00000384359 107 ntBASIC1.24□□□□□ -2.21
EBF3Q9H4W6 AC087499.7-201ENST00000441958 109 ntBASIC1.24□□□□□ -2.21
EBF3Q9H4W6 snoU13.21-201ENST00000459368 105 ntBASIC1.24□□□□□ -2.21
EBF3Q9H4W6 RNU11-2P-201ENST00000516898 142 ntBASIC1.24□□□□□ -2.21
EBF3Q9H4W6 MIR4500-201ENST00000579472 76 ntBASIC1.24□□□□□ -2.21
EBF3Q9H4W6 AL078603.1-201ENST00000603824 313 ntBASIC1.24□□□□□ -2.21
EBF3Q9H4W6 AP000753.3-201ENST00000604083 169 ntBASIC1.24□□□□□ -2.21
EBF3Q9H4W6 MIR3202-2-201ENST00000635980 79 ntBASIC1.24□□□□□ -2.21
EBF3Q9H4W6 Y_RNA.119-201ENST00000363301 96 ntBASIC1.23□□□□□ -2.21
EBF3Q9H4W6 SNORD38.2-201ENST00000384470 69 ntBASIC1.23□□□□□ -2.21
EBF3Q9H4W6 MT-TN-201ENST00000387400 73 ntBASIC1.23□□□□□ -2.21
EBF3Q9H4W6 BX276092.1-201ENST00000427368 251 ntBASIC1.23□□□□□ -2.21
EBF3Q9H4W6 MIR2115-201ENST00000516657 100 ntBASIC1.23□□□□□ -2.21
EBF3Q9H4W6 RNU6-850P-201ENST00000516934 103 ntBASIC1.23□□□□□ -2.21
EBF3Q9H4W6 AC008163.1-202ENST00000636004 2889 ntBASIC1.23□□□□□ -2.21
EBF3Q9H4W6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
EBF3Q9H4W6 MIR103A2-201ENST00000362154 78 ntBASIC1.22□□□□□ -2.21
EBF3Q9H4W6 RNU1-93P-201ENST00000364704 169 ntBASIC1.22□□□□□ -2.21
EBF3Q9H4W6 RNU6-580P-201ENST00000365159 107 ntBASIC1.22□□□□□ -2.21
EBF3Q9H4W6 Y_RNA.437-201ENST00000384113 113 ntBASIC1.22□□□□□ -2.21
EBF3Q9H4W6 RNU6-42P-201ENST00000384165 107 ntBASIC1.22□□□□□ -2.21
EBF3Q9H4W6 RNU6-524P-201ENST00000384270 107 ntBASIC1.22□□□□□ -2.21
EBF3Q9H4W6 Y_RNA.588-201ENST00000391254 102 ntBASIC1.22□□□□□ -2.21
EBF3Q9H4W6 RN7SKP88-201ENST00000516847 250 ntBASIC1.22□□□□□ -2.21
EBF3Q9H4W6 7SK.8-201ENST00000612110 250 ntBASIC1.22□□□□□ -2.21
EBF3Q9H4W6 7SK.11-201ENST00000615477 250 ntBASIC1.22□□□□□ -2.21
EBF3Q9H4W6 7SK.13-201ENST00000622040 250 ntBASIC1.22□□□□□ -2.21
EBF3Q9H4W6 MIR377-201ENST00000362145 69 ntBASIC1.21□□□□□ -2.22
EBF3Q9H4W6 RNU7-85P-201ENST00000458851 63 ntBASIC1.21□□□□□ -2.22
EBF3Q9H4W6 RNA5SP220-201ENST00000516298 104 ntBASIC1.21□□□□□ -2.22
EBF3Q9H4W6 SNORA25.16-201ENST00000516741 121 ntBASIC1.21□□□□□ -2.22
EBF3Q9H4W6 MIR4491-201ENST00000581087 68 ntBASIC1.21□□□□□ -2.22
EBF3Q9H4W6 Y_RNA.363-201ENST00000365529 113 ntBASIC1.2□□□□□ -2.22
EBF3Q9H4W6 RNU6-480P-201ENST00000384332 107 ntBASIC1.2□□□□□ -2.22
EBF3Q9H4W6 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
EBF3Q9H4W6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 207.8 ms