Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 RNU6-578P-201ENST00000390980 103 ntBASIC-0.91□□□□□ -2.56
VCX3BQ9H321 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.91□□□□□ -2.56
VCX3BQ9H321 RNU7-164P-201ENST00000459221 62 ntBASIC-0.91□□□□□ -2.56
VCX3BQ9H321 AC138907.4-201ENST00000570107 226 ntBASIC-0.91□□□□□ -2.56
VCX3BQ9H321 MIR369-201ENST00000362155 70 ntBASIC-0.92□□□□□ -2.56
VCX3BQ9H321 RNU6-502P-201ENST00000362419 108 ntBASIC-0.92□□□□□ -2.56
VCX3BQ9H321 SNORD115-25-201ENST00000362619 82 ntBASIC-0.92□□□□□ -2.56
VCX3BQ9H321 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.92□□□□□ -2.56
VCX3BQ9H321 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.92□□□□□ -2.56
VCX3BQ9H321 RNU6-616P-201ENST00000384353 107 ntBASIC-0.92□□□□□ -2.56
VCX3BQ9H321 AL161932.1-201ENST00000437408 146 ntBASIC-0.92□□□□□ -2.56
VCX3BQ9H321 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.92□□□□□ -2.56
VCX3BQ9H321 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.92□□□□□ -2.56
VCX3BQ9H321 TRDV1-202ENST00000621643 102 ntBASIC-0.92□□□□□ -2.56
VCX3BQ9H321 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.93□□□□□ -2.56
VCX3BQ9H321 SNORD42.2-201ENST00000365570 69 ntBASIC-0.93□□□□□ -2.56
VCX3BQ9H321 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.93□□□□□ -2.56
VCX3BQ9H321 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.93□□□□□ -2.56
VCX3BQ9H321 MIR34C-201ENST00000384831 77 ntBASIC-0.93□□□□□ -2.56
VCX3BQ9H321 RNU6-735P-201ENST00000410612 107 ntBASIC-0.93□□□□□ -2.56
VCX3BQ9H321 RBMX2P4-201ENST00000441256 376 ntBASIC-0.93□□□□□ -2.56
VCX3BQ9H321 MIR4493-201ENST00000584016 73 ntBASIC-0.93□□□□□ -2.56
VCX3BQ9H321 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.94□□□□□ -2.56
VCX3BQ9H321 SNORD115-35-201ENST00000365122 82 ntBASIC-0.94□□□□□ -2.56
VCX3BQ9H321 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.94□□□□□ -2.56
VCX3BQ9H321 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.94□□□□□ -2.56
VCX3BQ9H321 RNU6-721P-201ENST00000410155 105 ntBASIC-0.94□□□□□ -2.56
VCX3BQ9H321 RNU6-875P-201ENST00000516488 106 ntBASIC-0.94□□□□□ -2.56
VCX3BQ9H321 SNORA40.17-201ENST00000517256 115 ntBASIC-0.94□□□□□ -2.56
VCX3BQ9H321 AC113195.1-201ENST00000579952 141 ntBASIC-0.94□□□□□ -2.56
VCX3BQ9H321 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.94□□□□□ -2.56
VCX3BQ9H321 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.94□□□□□ -2.56
VCX3BQ9H321 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.95□□□□□ -2.56
VCX3BQ9H321 RNU4-40P-201ENST00000364351 143 ntBASIC-0.95□□□□□ -2.56
VCX3BQ9H321 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.95□□□□□ -2.56
VCX3BQ9H321 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.95□□□□□ -2.56
VCX3BQ9H321 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.95□□□□□ -2.56
VCX3BQ9H321 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.95□□□□□ -2.56
VCX3BQ9H321 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.95□□□□□ -2.56
VCX3BQ9H321 MIR4802-201ENST00000581881 80 ntBASIC-0.95□□□□□ -2.56
VCX3BQ9H321 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.95□□□□□ -2.56
VCX3BQ9H321 MTND5P18-201ENST00000445624 1801 ntBASIC-0.95□□□□□ -2.56
VCX3BQ9H321 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.96□□□□□ -2.56
VCX3BQ9H321 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.96□□□□□ -2.56
VCX3BQ9H321 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.96□□□□□ -2.56
VCX3BQ9H321 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.96□□□□□ -2.56
VCX3BQ9H321 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.96□□□□□ -2.56
VCX3BQ9H321 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.96□□□□□ -2.56
VCX3BQ9H321 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.96□□□□□ -2.56
VCX3BQ9H321 MIR3179-1-201ENST00000578940 84 ntBASIC-0.96□□□□□ -2.56
VCX3BQ9H321 MIR3179-2-201ENST00000579107 84 ntBASIC-0.96□□□□□ -2.56
VCX3BQ9H321 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.96□□□□□ -2.56
VCX3BQ9H321 MIR5589-201ENST00000579442 60 ntBASIC-0.96□□□□□ -2.56
VCX3BQ9H321 MIR3179-3-201ENST00000579566 84 ntBASIC-0.96□□□□□ -2.56
VCX3BQ9H321 MIR3179-4-201ENST00000617599 84 ntBASIC-0.96□□□□□ -2.56
VCX3BQ9H321 AC139792.2-201ENST00000624218 587 ntBASIC-0.96□□□□□ -2.56
VCX3BQ9H321 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.97□□□□□ -2.56
VCX3BQ9H321 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.97□□□□□ -2.56
VCX3BQ9H321 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.97□□□□□ -2.56
VCX3BQ9H321 MIR5704-201ENST00000584029 77 ntBASIC-0.97□□□□□ -2.56
VCX3BQ9H321 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.98□□□□□ -2.57
VCX3BQ9H321 RNU6-973P-201ENST00000364690 107 ntBASIC-0.98□□□□□ -2.57
VCX3BQ9H321 MIR582-201ENST00000365731 98 ntBASIC-0.98□□□□□ -2.57
VCX3BQ9H321 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.98□□□□□ -2.57
VCX3BQ9H321 MIR196A1-201ENST00000388006 70 ntBASIC-0.98□□□□□ -2.57
VCX3BQ9H321 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
VCX3BQ9H321 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.98□□□□□ -2.57
VCX3BQ9H321 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.98□□□□□ -2.57
VCX3BQ9H321 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.98□□□□□ -2.57
VCX3BQ9H321 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.98□□□□□ -2.57
VCX3BQ9H321 AC097510.1-201ENST00000510945 133 ntBASIC-0.98□□□□□ -2.57
VCX3BQ9H321 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.98□□□□□ -2.57
VCX3BQ9H321 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.98□□□□□ -2.57
VCX3BQ9H321 MIR4795-201ENST00000584182 89 ntBASIC-0.98□□□□□ -2.57
VCX3BQ9H321 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.98□□□□□ -2.57
VCX3BQ9H321 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.99□□□□□ -2.57
VCX3BQ9H321 SNORD27-201ENST00000363981 72 ntBASIC-0.99□□□□□ -2.57
VCX3BQ9H321 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.99□□□□□ -2.57
VCX3BQ9H321 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.99□□□□□ -2.57
VCX3BQ9H321 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.99□□□□□ -2.57
VCX3BQ9H321 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.99□□□□□ -2.57
VCX3BQ9H321 MIR518B-201ENST00000385127 83 ntBASIC-0.99□□□□□ -2.57
VCX3BQ9H321 MIR1912-201ENST00000410389 80 ntBASIC-0.99□□□□□ -2.57
VCX3BQ9H321 SNORD22.1-201ENST00000516331 125 ntBASIC-0.99□□□□□ -2.57
VCX3BQ9H321 RNY3P16-201ENST00000516338 101 ntBASIC-0.99□□□□□ -2.57
VCX3BQ9H321 MIR6779-201ENST00000617283 64 ntBASIC-0.99□□□□□ -2.57
VCX3BQ9H321 MIR335-201ENST00000362173 94 ntBASIC-1□□□□□ -2.57
VCX3BQ9H321 SNORD36A-201ENST00000362874 73 ntBASIC-1□□□□□ -2.57
VCX3BQ9H321 SNORD38.2-201ENST00000384470 69 ntBASIC-1□□□□□ -2.57
VCX3BQ9H321 Y_RNA.619-201ENST00000410951 90 ntBASIC-1□□□□□ -2.57
VCX3BQ9H321 MTATP6P21-201ENST00000440681 189 ntBASIC-1□□□□□ -2.57
VCX3BQ9H321 SNORD2-201ENST00000459163 69 ntBASIC-1□□□□□ -2.57
VCX3BQ9H321 MTND3P22-201ENST00000510932 243 ntBASIC-1□□□□□ -2.57
VCX3BQ9H321 Y_RNA.673-201ENST00000516306 88 ntBASIC-1□□□□□ -2.57
VCX3BQ9H321 RNU6-988P-201ENST00000519081 107 ntBASIC-1□□□□□ -2.57
VCX3BQ9H321 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.01□□□□□ -2.57
VCX3BQ9H321 RNU6-957P-201ENST00000363652 99 ntBASIC-1.01□□□□□ -2.57
VCX3BQ9H321 SNORD114-25-201ENST00000363742 72 ntBASIC-1.01□□□□□ -2.57
VCX3BQ9H321 RNU6-768P-201ENST00000384683 107 ntBASIC-1.01□□□□□ -2.57
VCX3BQ9H321 RNU6-476P-201ENST00000384726 107 ntBASIC-1.01□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms